RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 TXNDC2Q86VQ3 553 aa9.73□□□□□ -0.85
PRPF8-210ENST00000574217 RIMS2Q9UQ26 1411 aa9.73□□□□□ -0.85
PRPF8-210ENST00000574217 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
PRPF8-210ENST00000574217 IQGAP1P46940 1657 aa9.72□□□□□ -0.85
PRPF8-210ENST00000574217 SIN3AQ96ST3 1273 aa9.72□□□□□ -0.85
PRPF8-210ENST00000574217 DMRT2Q9Y5R5 561 aa9.72□□□□□ -0.85
PRPF8-210ENST00000574217 NPHP4O75161 1426 aaPredicted RBP9.72□□□□□ -0.85
PRPF8-210ENST00000574217 ZFYVE9O95405 1425 aa9.72□□□□□ -0.85
PRPF8-210ENST00000574217 MED14O60244 1454 aa9.72□□□□□ -0.85
PRPF8-210ENST00000574217 NEUROD1Q13562 356 aa9.71□□□□□ -0.86
PRPF8-210ENST00000574217 ZNF326Q5BKZ1 582 aaKnown RBP9.71□□□□□ -0.86
PRPF8-210ENST00000574217 NUTM2DQ5VT03 806 aaPredicted RBP9.71□□□□□ -0.86
PRPF8-210ENST00000574217 EID1Q9Y6B2 187 aa9.71□□□□□ -0.86
PRPF8-210ENST00000574217 NEXMIFQ5QGS0 1516 aa9.7□□□□□ -0.86
PRPF8-210ENST00000574217 PPLO60437 1756 aa9.7□□□□□ -0.86
PRPF8-210ENST00000574217 SPATA31E1Q6ZUB1 1445 aa9.69□□□□□ -0.86
PRPF8-210ENST00000574217 IFT172Q9UG01 1749 aa9.68□□□□□ -0.86
PRPF8-210ENST00000574217 TONSLQ96HA7 1378 aa9.68□□□□□ -0.86
PRPF8-210ENST00000574217 PPP1R15AO75807 674 aaPredicted RBP9.68□□□□□ -0.86
PRPF8-210ENST00000574217 HDGFP51858 240 aaKnown RBP9.68□□□□□ -0.86
PRPF8-210ENST00000574217 RGL3Q3MIN7 710 aa9.68□□□□□ -0.86
PRPF8-210ENST00000574217 PIAS4Q8N2W9 510 aaPredicted RBP9.68□□□□□ -0.86
PRPF8-210ENST00000574217 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.68□□□□□ -0.86
PRPF8-210ENST00000574217 PLEKHG1Q9ULL1 1385 aa9.67□□□□□ -0.86
PRPF8-210ENST00000574217 RPGRIP1LQ68CZ1 1315 aa9.66□□□□□ -0.86
PRPF8-210ENST00000574217 BCANQ96GW7 911 aa9.66□□□□□ -0.86
PRPF8-210ENST00000574217 TIMELESSQ9UNS1 1208 aa9.66□□□□□ -0.86
PRPF8-210ENST00000574217 NRXN3Q9Y4C0 1643 aa9.66□□□□□ -0.86
PRPF8-210ENST00000574217 STRCP1A6NGW2 1772 aa9.65□□□□□ -0.86
PRPF8-210ENST00000574217 ZNF335Q9H4Z2 1342 aaPredicted RBP9.65□□□□□ -0.86
PRPF8-210ENST00000574217 ZEB1P37275 1124 aaPredicted RBP9.65□□□□□ -0.86
PRPF8-210ENST00000574217 SLC26A8Q96RN1 970 aa9.65□□□□□ -0.86
PRPF8-210ENST00000574217 ADAMTS13Q76LX8 1427 aa9.65□□□□□ -0.87
PRPF8-210ENST00000574217 LTBP4Q8N2S1 1624 aa9.64□□□□□ -0.87
PRPF8-210ENST00000574217 SETBP1Q9Y6X0 1596 aa9.64□□□□□ -0.87
PRPF8-210ENST00000574217 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
PRPF8-210ENST00000574217 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
PRPF8-210ENST00000574217 CHD2O14647 1828 aaKnown RBP9.63□□□□□ -0.87
PRPF8-210ENST00000574217 DIP2AQ14689 1571 aa9.63□□□□□ -0.87
PRPF8-210ENST00000574217 SETD1AO15047 1707 aaKnown RBP9.62□□□□□ -0.87
PRPF8-210ENST00000574217 ADGRF5Q8IZF2 1346 aa9.62□□□□□ -0.87
PRPF8-210ENST00000574217 DCAF11Q8TEB1 546 aa9.62□□□□□ -0.87
PRPF8-210ENST00000574217 TBX22Q9Y458 520 aa9.62□□□□□ -0.87
PRPF8-210ENST00000574217 STAC3Q96MF2 364 aa9.61□□□□□ -0.87
PRPF8-210ENST00000574217 ALKQ9UM73 1620 aa9.6□□□□□ -0.87
PRPF8-210ENST00000574217 MYOM2P54296 1465 aa9.6□□□□□ -0.87
PRPF8-210ENST00000574217 NWD1Q149M9 1564 aa9.6□□□□□ -0.87
PRPF8-210ENST00000574217 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
PRPF8-210ENST00000574217 CPS1P31327 1500 aa9.6□□□□□ -0.87
PRPF8-210ENST00000574217 NRXN1Q9ULB1 1477 aa9.59□□□□□ -0.87
PRPF8-210ENST00000574217 PTPRUQ92729 1446 aa9.59□□□□□ -0.87
PRPF8-210ENST00000574217 KCNA6P17658 529 aa9.59□□□□□ -0.87
PRPF8-210ENST00000574217 CERKQ8TCT0 537 aa9.59□□□□□ -0.87
PRPF8-210ENST00000574217 METP08581 1390 aa9.59□□□□□ -0.87
PRPF8-210ENST00000574217 XIRP1Q702N8 1843 aaKnown RBP9.59□□□□□ -0.88
PRPF8-210ENST00000574217 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
PRPF8-210ENST00000574217 ILDR1Q86SU0 546 aaPredicted RBP9.58□□□□□ -0.88
PRPF8-210ENST00000574217 PRAG1Q86YV5 1406 aa9.57□□□□□ -0.88
PRPF8-210ENST00000574217 LRRC7Q96NW7 1537 aa9.57□□□□□ -0.88
PRPF8-210ENST00000574217 XRN1Q8IZH2 1706 aaKnown RBP9.57□□□□□ -0.88
PRPF8-210ENST00000574217 PIK3R4Q99570 1358 aa9.57□□□□□ -0.88
PRPF8-210ENST00000574217 ASXL1Q8IXJ9 1541 aa9.56□□□□□ -0.88
PRPF8-210ENST00000574217 LAMC1P11047 1609 aa9.56□□□□□ -0.88
PRPF8-210ENST00000574217 NKTRP30414 1462 aaKnown RBP9.56□□□□□ -0.88
PRPF8-210ENST00000574217 CFAP70Q5T0N1 1121 aa9.56□□□□□ -0.88
PRPF8-210ENST00000574217 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
PRPF8-210ENST00000574217 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
PRPF8-210ENST00000574217 RBM33Q96EV2 1170 aaKnown RBP9.55□□□□□ -0.88
PRPF8-210ENST00000574217 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
PRPF8-210ENST00000574217 IQSEC2Q5JU85 1478 aa9.54□□□□□ -0.88
PRPF8-210ENST00000574217 NBPF8Q3BBV2 869 aa9.54□□□□□ -0.88
PRPF8-210ENST00000574217 TMEM132EQ6IEE7 984 aa9.54□□□□□ -0.88
PRPF8-210ENST00000574217 KNDC1Q76NI1 1749 aa9.53□□□□□ -0.88
PRPF8-210ENST00000574217 TMEM94Q12767 1356 aa9.53□□□□□ -0.88
PRPF8-210ENST00000574217 KIAA1210Q9ULL0 1709 aa9.53□□□□□ -0.88
PRPF8-210ENST00000574217 RALGAPBQ86X10 1494 aa9.53□□□□□ -0.88
PRPF8-210ENST00000574217 TRPM1Q7Z4N2 1603 aa9.53□□□□□ -0.88
PRPF8-210ENST00000574217 ADGRB1O14514 1584 aa9.52□□□□□ -0.89
PRPF8-210ENST00000574217 STK26Q9P289 416 aa9.52□□□□□ -0.89
PRPF8-210ENST00000574217 ROCK2O75116 1388 aaKnown RBP9.51□□□□□ -0.89
PRPF8-210ENST00000574217 LRPPRCP42704 1394 aaKnown RBP9.51□□□□□ -0.89
PRPF8-210ENST00000574217 YTHDC2Q9H6S0 1430 aaKnown RBP9.51□□□□□ -0.89
PRPF8-210ENST00000574217 ROBO2Q9HCK4 1378 aa9.5□□□□□ -0.89
PRPF8-210ENST00000574217 TECPR2O15040 1411 aa9.5□□□□□ -0.89
PRPF8-210ENST00000574217 PTCH1Q13635 1447 aa9.5□□□□□ -0.89
PRPF8-210ENST00000574217 NALCNQ8IZF0 1738 aa9.5□□□□□ -0.89
PRPF8-210ENST00000574217 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.5□□□□□ -0.89
PRPF8-210ENST00000574217 ABCC11Q96J66 1382 aa9.5□□□□□ -0.89
PRPF8-210ENST00000574217 NCOA3Q9Y6Q9 1424 aa9.49□□□□□ -0.89
PRPF8-210ENST00000574217 UBAP1LF5GYI3 381 aa9.49□□□□□ -0.89
PRPF8-210ENST00000574217 NBPF1Q3BBV0 1214 aa9.49□□□□□ -0.89
PRPF8-210ENST00000574217 CARD11Q9BXL7 1154 aa9.49□□□□□ -0.89
PRPF8-210ENST00000574217 GPRASP1Q5JY77 1395 aa9.49□□□□□ -0.89
PRPF8-210ENST00000574217 WAPLQ7Z5K2 1190 aa9.48□□□□□ -0.89
PRPF8-210ENST00000574217 C14orf37Q86TY3 774 aa9.48□□□□□ -0.89
PRPF8-210ENST00000574217 FBXO41Q8TF61 875 aa9.48□□□□□ -0.89
PRPF8-210ENST00000574217 TRAK1Q9UPV9 953 aa9.48□□□□□ -0.89
PRPF8-210ENST00000574217 MSH6P52701 1360 aa9.48□□□□□ -0.89
PRPF8-210ENST00000574217 PLEKHH1Q9ULM0 1364 aa9.48□□□□□ -0.89
PRPF8-210ENST00000574217 ARHGEF28Q8N1W1 1705 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms