RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-211ENST00000573212 PRDM15P57071 1507 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-211ENST00000573212 SLC26A8Q96RN1 970 aa12.76□□□□□ -0.37
NPLOC4-211ENST00000573212 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
NPLOC4-211ENST00000573212 TET3O43151 1660 aa12.76□□□□□ -0.37
NPLOC4-211ENST00000573212 CEP152O94986 1710 aa12.75□□□□□ -0.37
NPLOC4-211ENST00000573212 LMTK2Q8IWU2 1503 aa12.74□□□□□ -0.37
NPLOC4-211ENST00000573212 NOS1P29475 1434 aa12.74□□□□□ -0.37
NPLOC4-211ENST00000573212 KANK1Q14678 1352 aa12.74□□□□□ -0.37
NPLOC4-211ENST00000573212 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-211ENST00000573212 SLC52A1Q9NWF4 448 aa12.74□□□□□ -0.37
NPLOC4-211ENST00000573212 XIRP1Q702N8 1843 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-211ENST00000573212 DAPK1P53355 1430 aa12.73□□□□□ -0.37
NPLOC4-211ENST00000573212 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
NPLOC4-211ENST00000573212 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-211ENST00000573212 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
NPLOC4-211ENST00000573212 CHIC2Q9UKJ5 165 aa12.72□□□□□ -0.37
NPLOC4-211ENST00000573212 EFCAB6Q5THR3 1501 aa12.72□□□□□ -0.37
NPLOC4-211ENST00000573212 SLAIN2Q9P270 581 aa12.71□□□□□ -0.37
NPLOC4-211ENST00000573212 ANKRD30AQ9BXX3 1397 aa12.7□□□□□ -0.38
NPLOC4-211ENST00000573212 KDM5AP29375 1690 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-211ENST00000573212 FGD6Q6ZV73 1430 aa12.69□□□□□ -0.38
NPLOC4-211ENST00000573212 TBX22Q9Y458 520 aa12.68□□□□□ -0.38
NPLOC4-211ENST00000573212 PTPN23Q9H3S7 1636 aa12.68□□□□□ -0.38
NPLOC4-211ENST00000573212 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-211ENST00000573212 MSH6P52701 1360 aa12.67□□□□□ -0.38
NPLOC4-211ENST00000573212 ZFYVE9O95405 1425 aa12.66□□□□□ -0.38
NPLOC4-211ENST00000573212 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-211ENST00000573212 APLP2Q06481 763 aa12.66□□□□□ -0.38
NPLOC4-211ENST00000573212 JCADQ9P266 1359 aa12.66□□□□□ -0.38
NPLOC4-211ENST00000573212 PLEKHG1Q9ULL1 1385 aa12.66□□□□□ -0.38
NPLOC4-211ENST00000573212 NWD1Q149M9 1564 aa12.65□□□□□ -0.38
NPLOC4-211ENST00000573212 NCOA3Q9Y6Q9 1424 aa12.65□□□□□ -0.38
NPLOC4-211ENST00000573212 ROBO1Q9Y6N7 1651 aa12.65□□□□□ -0.38
NPLOC4-211ENST00000573212 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
NPLOC4-211ENST00000573212 PROM2Q8N271 834 aa12.65□□□□□ -0.38
NPLOC4-211ENST00000573212 BCANQ96GW7 911 aa12.65□□□□□ -0.38
NPLOC4-211ENST00000573212 ADGRB3O60242 1522 aa12.64□□□□□ -0.39
NPLOC4-211ENST00000573212 ADGRL2O95490 1459 aa12.64□□□□□ -0.39
NPLOC4-211ENST00000573212 CROCC2H7BZ55 1655 aa12.64□□□□□ -0.39
NPLOC4-211ENST00000573212 RPRD2Q5VT52 1461 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-211ENST00000573212 RIMS2Q9UQ26 1411 aa12.62□□□□□ -0.39
NPLOC4-211ENST00000573212 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
NPLOC4-211ENST00000573212 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
NPLOC4-211ENST00000573212 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
NPLOC4-211ENST00000573212 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
NPLOC4-211ENST00000573212 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
NPLOC4-211ENST00000573212 ANKRD50Q9ULJ7 1429 aa12.61□□□□□ -0.39
NPLOC4-211ENST00000573212 SPATA31A6Q5VVP1 1343 aa12.61□□□□□ -0.39
NPLOC4-211ENST00000573212 ADAMTS13Q76LX8 1427 aa12.6□□□□□ -0.39
NPLOC4-211ENST00000573212 PIK3R4Q99570 1358 aa12.59□□□□□ -0.39
NPLOC4-211ENST00000573212 PPP1R15AO75807 674 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-211ENST00000573212 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-211ENST00000573212 CADPS2Q86UW7 1296 aa12.59□□□□□ -0.39
NPLOC4-211ENST00000573212 UPF1Q92900 1129 aaKnown RBP eCLIP12.59□□□□□ -0.39
NPLOC4-211ENST00000573212 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-211ENST00000573212 ZNF772Q68DY9 489 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-211ENST00000573212 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-211ENST00000573212 NUTM2DQ5VT03 806 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-211ENST00000573212 AMOTL2Q9Y2J4 779 aa12.57□□□□□ -0.4
NPLOC4-211ENST00000573212 TMEM131LA2VDJ0 1609 aa12.57□□□□□ -0.4
NPLOC4-211ENST00000573212 LRP6O75581 1613 aa12.57□□□□□ -0.4
NPLOC4-211ENST00000573212 COL16A1Q07092 1604 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-211ENST00000573212 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-211ENST00000573212 ATF3P18847 181 aa12.56□□□□□ -0.4
NPLOC4-211ENST00000573212 VASPP50552 380 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-211ENST00000573212 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-211ENST00000573212 PHLPP1O60346 1717 aa12.55□□□□□ -0.4
NPLOC4-211ENST00000573212 BRINP3Q76B58 766 aa12.55□□□□□ -0.4
NPLOC4-211ENST00000573212 PTPRUQ92729 1446 aa12.54□□□□□ -0.4
NPLOC4-211ENST00000573212 C14orf37Q86TY3 774 aa12.54□□□□□ -0.4
NPLOC4-211ENST00000573212 AHDC1Q5TGY3 1603 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-211ENST00000573212 RXRBP28702 533 aa12.53□□□□□ -0.4
NPLOC4-211ENST00000573212 MEX3CQ5U5Q3 659 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-211ENST00000573212 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
NPLOC4-211ENST00000573212 ROCK1Q13464 1354 aa12.51□□□□□ -0.41
NPLOC4-211ENST00000573212 SETD5Q9C0A6 1442 aa12.5□□□□□ -0.41
NPLOC4-211ENST00000573212 DIP2AQ14689 1571 aa12.5□□□□□ -0.41
NPLOC4-211ENST00000573212 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-211ENST00000573212 GCC2Q8IWJ2 1684 aa12.49□□□□□ -0.41
NPLOC4-211ENST00000573212 NUP155O75694 1391 aa12.49□□□□□ -0.41
NPLOC4-211ENST00000573212 LRRC59Q96AG4 307 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-211ENST00000573212 SETD1AO15047 1707 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-211ENST00000573212 UNC13BO14795 1591 aa12.48□□□□□ -0.41
NPLOC4-211ENST00000573212 CDK12Q9NYV4 1490 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-211ENST00000573212 DCCP43146 1447 aa12.48□□□□□ -0.41
NPLOC4-211ENST00000573212 NUTM2BA6NNL0 878 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-211ENST00000573212 NUTM2EB1AL46 878 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-211ENST00000573212 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-211ENST00000573212 MYO5BQ9ULV0 1848 aa12.48□□□□□ -0.41
NPLOC4-211ENST00000573212 AFF2P51816 1311 aa12.47□□□□□ -0.41
NPLOC4-211ENST00000573212 IFNLR1Q8IU57 520 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-211ENST00000573212 SHPRHQ149N8 1683 aa12.47□□□□□ -0.41
NPLOC4-211ENST00000573212 TRPM2O94759 1503 aa12.47□□□□□ -0.41
NPLOC4-211ENST00000573212 MST1RQ04912 1400 aa12.46□□□□□ -0.41
NPLOC4-211ENST00000573212 METP08581 1390 aa12.46□□□□□ -0.41
NPLOC4-211ENST00000573212 E9PCH4 1651 aa12.46□□□□□ -0.41
NPLOC4-211ENST00000573212 QTRT2Q9H974 415 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-211ENST00000573212 RBM6P78332 1123 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-211ENST00000573212 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms