RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 FOXD1Q16676 465 aa33.86■■■■□ 3.01
SLC12A4-205ENST00000570616 CERKQ8TCT0 537 aa33.86■■■■□ 3.01
SLC12A4-205ENST00000570616 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.83■■■■□ 3.01
SLC12A4-205ENST00000570616 PLEKHG1Q9ULL1 1385 aa33.8■■■■□ 3
SLC12A4-205ENST00000570616 PPP1R15AO75807 674 aaPredicted RBP33.79■■■■□ 3
SLC12A4-205ENST00000570616 CCDC144AA2RUR9 1427 aa33.78■■■■□ 3
SLC12A4-205ENST00000570616 CPS1P31327 1500 aa33.75■■■□□ 2.99
SLC12A4-205ENST00000570616 ZNF326Q5BKZ1 582 aaKnown RBP33.74■■■□□ 2.99
SLC12A4-205ENST00000570616 IQSEC2Q5JU85 1478 aa33.74■■■□□ 2.99
SLC12A4-205ENST00000570616 KIF1BO60333 1816 aa33.72■■■□□ 2.99
SLC12A4-205ENST00000570616 NUTM2DQ5VT03 806 aaPredicted RBP33.7■■■□□ 2.99
SLC12A4-205ENST00000570616 NEXMIFQ5QGS0 1516 aa33.69■■■□□ 2.98
SLC12A4-205ENST00000570616 BCANQ96GW7 911 aa33.69■■■□□ 2.98
SLC12A4-205ENST00000570616 FBXO41Q8TF61 875 aa33.68■■■□□ 2.98
SLC12A4-205ENST00000570616 SLC26A8Q96RN1 970 aa33.68■■■□□ 2.98
SLC12A4-205ENST00000570616 TRIM26Q12899 539 aaPredicted RBP33.66■■■□□ 2.98
SLC12A4-205ENST00000570616 SPATA31E1Q6ZUB1 1445 aa33.64■■■□□ 2.98
SLC12A4-205ENST00000570616 RPGRIP1LQ68CZ1 1315 aa33.64■■■□□ 2.98
SLC12A4-205ENST00000570616 ADAMTS13Q76LX8 1427 aa33.63■■■□□ 2.97
SLC12A4-205ENST00000570616 DIP2AQ14689 1571 aa33.63■■■□□ 2.97
SLC12A4-205ENST00000570616 ANKRD30BQ9BXX2 1392 aa33.62■■■□□ 2.97
SLC12A4-205ENST00000570616 ILDR1Q86SU0 546 aaPredicted RBP33.61■■■□□ 2.97
SLC12A4-205ENST00000570616 SENP3Q9H4L4 574 aaPredicted RBP33.61■■■□□ 2.97
SLC12A4-205ENST00000570616 TBX22Q9Y458 520 aa33.61■■■□□ 2.97
SLC12A4-205ENST00000570616 SETBP1Q9Y6X0 1596 aa33.6■■■□□ 2.97
SLC12A4-205ENST00000570616 STRCP1A6NGW2 1772 aa33.6■■■□□ 2.97
SLC12A4-205ENST00000570616 KCNA6P17658 529 aa33.58■■■□□ 2.97
SLC12A4-205ENST00000570616 LRRC7Q96NW7 1537 aa33.57■■■□□ 2.96
SLC12A4-205ENST00000570616 NWD1Q149M9 1564 aa33.56■■■□□ 2.96
SLC12A4-205ENST00000570616 VGFO15240 615 aaPredicted RBP33.56■■■□□ 2.96
SLC12A4-205ENST00000570616 NRXN3Q9Y4C0 1643 aa33.55■■■□□ 2.96
SLC12A4-205ENST00000570616 PIK3R4Q99570 1358 aa33.54■■■□□ 2.96
SLC12A4-205ENST00000570616 NKTRP30414 1462 aaKnown RBP33.52■■■□□ 2.96
SLC12A4-205ENST00000570616 RGL3Q3MIN7 710 aa33.51■■■□□ 2.95
SLC12A4-205ENST00000570616 PPLO60437 1756 aa33.5■■■□□ 2.95
SLC12A4-205ENST00000570616 CHD2O14647 1828 aaKnown RBP33.44■■■□□ 2.94
SLC12A4-205ENST00000570616 IFT172Q9UG01 1749 aa33.42■■■□□ 2.94
SLC12A4-205ENST00000570616 TMEM94Q12767 1356 aa33.42■■■□□ 2.94
SLC12A4-205ENST00000570616 UBAP1LF5GYI3 381 aa33.41■■■□□ 2.94
SLC12A4-205ENST00000570616 METP08581 1390 aa33.41■■■□□ 2.94
SLC12A4-205ENST00000570616 PTPRUQ92729 1446 aa33.4■■■□□ 2.94
SLC12A4-205ENST00000570616 ADGRF5Q8IZF2 1346 aa33.4■■■□□ 2.94
SLC12A4-205ENST00000570616 PROSER2Q86WR7 435 aaPredicted RBP33.39■■■□□ 2.94
SLC12A4-205ENST00000570616 ALKQ9UM73 1620 aa33.37■■■□□ 2.93
SLC12A4-205ENST00000570616 MYOM2P54296 1465 aa33.37■■■□□ 2.93
SLC12A4-205ENST00000570616 AMOTL2Q9Y2J4 779 aa33.36■■■□□ 2.93
SLC12A4-205ENST00000570616 PIK3C2GO75747 1445 aa33.35■■■□□ 2.93
SLC12A4-205ENST00000570616 XRN1Q8IZH2 1706 aaKnown RBP33.34■■■□□ 2.93
SLC12A4-205ENST00000570616 TOM1O60784 492 aa33.34■■■□□ 2.93
SLC12A4-205ENST00000570616 SETD1AO15047 1707 aaKnown RBP33.33■■■□□ 2.93
SLC12A4-205ENST00000570616 NRXN1Q9ULB1 1477 aa33.33■■■□□ 2.93
SLC12A4-205ENST00000570616 XIRP1Q702N8 1843 aaKnown RBP33.32■■■□□ 2.93
SLC12A4-205ENST00000570616 NCOA3Q9Y6Q9 1424 aa33.31■■■□□ 2.92
SLC12A4-205ENST00000570616 DHX57Q6P158 1386 aaKnown RBP33.31■■■□□ 2.92
SLC12A4-205ENST00000570616 RBM33Q96EV2 1170 aaKnown RBP33.29■■■□□ 2.92
SLC12A4-205ENST00000570616 PRAG1Q86YV5 1406 aa33.27■■■□□ 2.92
SLC12A4-205ENST00000570616 MSH6P52701 1360 aa33.24■■■□□ 2.91
SLC12A4-205ENST00000570616 STAC3Q96MF2 364 aa33.24■■■□□ 2.91
SLC12A4-205ENST00000570616 PTCH1Q13635 1447 aa33.23■■■□□ 2.91
SLC12A4-205ENST00000570616 DCAF11Q8TEB1 546 aa33.2■■■□□ 2.91
SLC12A4-205ENST00000570616 C14orf93Q9H972 538 aaKnown RBP33.2■■■□□ 2.91
SLC12A4-205ENST00000570616 ASXL1Q8IXJ9 1541 aa33.19■■■□□ 2.9
SLC12A4-205ENST00000570616 PIP4K2BP78356 416 aa33.19■■■□□ 2.9
SLC12A4-205ENST00000570616 LAMC1P11047 1609 aa33.18■■■□□ 2.9
SLC12A4-205ENST00000570616 C14orf37Q86TY3 774 aa33.17■■■□□ 2.9
SLC12A4-205ENST00000570616 SCAF1Q9H7N4 1312 aaKnown RBP33.17■■■□□ 2.9
SLC12A4-205ENST00000570616 LRPPRCP42704 1394 aaKnown RBP33.15■■■□□ 2.9
SLC12A4-205ENST00000570616 ROBO2Q9HCK4 1378 aa33.15■■■□□ 2.9
SLC12A4-205ENST00000570616 KDM2AQ9Y2K7 1162 aa33.15■■■□□ 2.9
SLC12A4-205ENST00000570616 C19orf44Q9H6X5 657 aa33.14■■■□□ 2.9
SLC12A4-205ENST00000570616 TECPR2O15040 1411 aa33.13■■■□□ 2.89
SLC12A4-205ENST00000570616 CFAP70Q5T0N1 1121 aa33.13■■■□□ 2.89
SLC12A4-205ENST00000570616 DCCP43146 1447 aa33.11■■■□□ 2.89
SLC12A4-205ENST00000570616 TMEM132EQ6IEE7 984 aa33.11■■■□□ 2.89
SLC12A4-205ENST00000570616 ABCC11Q96J66 1382 aa33.1■■■□□ 2.89
SLC12A4-205ENST00000570616 SIN3AQ96ST3 1273 aa33.1■■■□□ 2.89
SLC12A4-205ENST00000570616 YTHDC2Q9H6S0 1430 aaKnown RBP33.1■■■□□ 2.89
SLC12A4-205ENST00000570616 ADGRL3Q9HAR2 1447 aa33.1■■■□□ 2.89
SLC12A4-205ENST00000570616 PCGF6Q9BYE7 350 aa33.09■■■□□ 2.89
SLC12A4-205ENST00000570616 CADPS2Q86UW7 1296 aa33.07■■■□□ 2.88
SLC12A4-205ENST00000570616 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.07■■■□□ 2.88
SLC12A4-205ENST00000570616 FAM135BQ49AJ0 1406 aa33.06■■■□□ 2.88
SLC12A4-205ENST00000570616 KNDC1Q76NI1 1749 aa33.05■■■□□ 2.88
SLC12A4-205ENST00000570616 ATF3P18847 181 aa33.05■■■□□ 2.88
SLC12A4-205ENST00000570616 STK26Q9P289 416 aa33.05■■■□□ 2.88
SLC12A4-205ENST00000570616 ADGRB1O14514 1584 aa33.04■■■□□ 2.88
SLC12A4-205ENST00000570616 SLAIN2Q9P270 581 aa33.03■■■□□ 2.88
SLC12A4-205ENST00000570616 NEUROD1Q13562 356 aa33.02■■■□□ 2.88
SLC12A4-205ENST00000570616 NALCNQ8IZF0 1738 aa33.01■■■□□ 2.87
SLC12A4-205ENST00000570616 HSPA1LP34931 641 aa33■■■□□ 2.87
SLC12A4-205ENST00000570616 L3MBTL2Q969R5 705 aa33■■■□□ 2.87
SLC12A4-205ENST00000570616 SIRT1Q96EB6 747 aa32.99■■■□□ 2.87
SLC12A4-205ENST00000570616 ROBO1Q9Y6N7 1651 aa32.95■■■□□ 2.87
SLC12A4-205ENST00000570616 DLC1Q96QB1 1528 aa32.95■■■□□ 2.87
SLC12A4-205ENST00000570616 MST1RQ04912 1400 aa32.94■■■□□ 2.86
SLC12A4-205ENST00000570616 WAPLQ7Z5K2 1190 aa32.94■■■□□ 2.86
SLC12A4-205ENST00000570616 PLEKHH1Q9ULM0 1364 aa32.94■■■□□ 2.86
SLC12A4-205ENST00000570616 KIAA1210Q9ULL0 1709 aa32.91■■■□□ 2.86
SLC12A4-205ENST00000570616 CDC42BPGQ6DT37 1551 aa32.9■■■□□ 2.86
SLC12A4-205ENST00000570616 PRAM1Q96QH2 718 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms