RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 NEXMIFQ5QGS0 1516 aa16.56■□□□□ 0.24
CALCOCO2-225ENST00000570513 MYOM2P54296 1465 aa16.56■□□□□ 0.24
CALCOCO2-225ENST00000570513 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
CALCOCO2-225ENST00000570513 PPLO60437 1756 aa16.54■□□□□ 0.24
CALCOCO2-225ENST00000570513 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
CALCOCO2-225ENST00000570513 DCAF11Q8TEB1 546 aa16.54■□□□□ 0.24
CALCOCO2-225ENST00000570513 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
CALCOCO2-225ENST00000570513 PPP1R15AO75807 674 aaPredicted RBP16.53■□□□□ 0.24
CALCOCO2-225ENST00000570513 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
CALCOCO2-225ENST00000570513 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
CALCOCO2-225ENST00000570513 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
CALCOCO2-225ENST00000570513 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
CALCOCO2-225ENST00000570513 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
CALCOCO2-225ENST00000570513 RALGAPBQ86X10 1494 aa16.49■□□□□ 0.23
CALCOCO2-225ENST00000570513 ZFYVE9O95405 1425 aa16.49■□□□□ 0.23
CALCOCO2-225ENST00000570513 NBPF8Q3BBV2 869 aa16.49■□□□□ 0.23
CALCOCO2-225ENST00000570513 RIMS2Q9UQ26 1411 aa16.49■□□□□ 0.23
CALCOCO2-225ENST00000570513 RPGRIP1LQ68CZ1 1315 aa16.48■□□□□ 0.23
CALCOCO2-225ENST00000570513 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
CALCOCO2-225ENST00000570513 TMEM2Q9UHN6 1383 aa16.47■□□□□ 0.23
CALCOCO2-225ENST00000570513 ADGRF5Q8IZF2 1346 aa16.46■□□□□ 0.23
CALCOCO2-225ENST00000570513 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
CALCOCO2-225ENST00000570513 SLIT1O75093 1534 aa16.46■□□□□ 0.23
CALCOCO2-225ENST00000570513 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
CALCOCO2-225ENST00000570513 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
CALCOCO2-225ENST00000570513 STAC3Q96MF2 364 aa16.43■□□□□ 0.22
CALCOCO2-225ENST00000570513 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
CALCOCO2-225ENST00000570513 LAMC1P11047 1609 aa16.41■□□□□ 0.22
CALCOCO2-225ENST00000570513 SETD1BQ9UPS6 1966 aaKnown RBP16.4■□□□□ 0.22
CALCOCO2-225ENST00000570513 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
CALCOCO2-225ENST00000570513 VGFO15240 615 aaPredicted RBP16.4■□□□□ 0.22
CALCOCO2-225ENST00000570513 NRXN3Q9Y4C0 1643 aa16.4■□□□□ 0.22
CALCOCO2-225ENST00000570513 SCAF11Q99590 1463 aaKnown RBP16.4■□□□□ 0.22
CALCOCO2-225ENST00000570513 IQGAP1P46940 1657 aa16.4■□□□□ 0.22
CALCOCO2-225ENST00000570513 SETBP1Q9Y6X0 1596 aa16.39■□□□□ 0.21
CALCOCO2-225ENST00000570513 THEMISQ8N1K5 641 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO2-225ENST00000570513 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
CALCOCO2-225ENST00000570513 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
CALCOCO2-225ENST00000570513 LMTK3Q96Q04 1460 aa16.38■□□□□ 0.21
CALCOCO2-225ENST00000570513 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
CALCOCO2-225ENST00000570513 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
CALCOCO2-225ENST00000570513 PLEKHG1Q9ULL1 1385 aa16.37■□□□□ 0.21
CALCOCO2-225ENST00000570513 ADGRB1O14514 1584 aa16.36■□□□□ 0.21
CALCOCO2-225ENST00000570513 ALKQ9UM73 1620 aa16.36■□□□□ 0.21
CALCOCO2-225ENST00000570513 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
CALCOCO2-225ENST00000570513 LTKP29376 864 aa16.35■□□□□ 0.21
CALCOCO2-225ENST00000570513 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
CALCOCO2-225ENST00000570513 CFAP70Q5T0N1 1121 aa16.35■□□□□ 0.21
CALCOCO2-225ENST00000570513 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
CALCOCO2-225ENST00000570513 POLR1AO95602 1720 aaPredicted RBP16.34■□□□□ 0.21
CALCOCO2-225ENST00000570513 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
CALCOCO2-225ENST00000570513 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
CALCOCO2-225ENST00000570513 EID1Q9Y6B2 187 aa16.34■□□□□ 0.21
CALCOCO2-225ENST00000570513 USP47Q96K76 1375 aa16.34■□□□□ 0.21
CALCOCO2-225ENST00000570513 CARD11Q9BXL7 1154 aa16.33■□□□□ 0.2
CALCOCO2-225ENST00000570513 C14orf93Q9H972 538 aaKnown RBP16.33■□□□□ 0.2
CALCOCO2-225ENST00000570513 ADAMTS13Q76LX8 1427 aa16.33■□□□□ 0.2
CALCOCO2-225ENST00000570513 DIP2AQ14689 1571 aa16.31■□□□□ 0.2
CALCOCO2-225ENST00000570513 MED14O60244 1454 aa16.29■□□□□ 0.2
CALCOCO2-225ENST00000570513 ANKLE2Q86XL3 938 aa16.29■□□□□ 0.2
CALCOCO2-225ENST00000570513 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
CALCOCO2-225ENST00000570513 HSPA5P11021 654 aaKnown RBP16.28■□□□□ 0.2
CALCOCO2-225ENST00000570513 HSPA2P54652 639 aa16.28■□□□□ 0.2
CALCOCO2-225ENST00000570513 BCANQ96GW7 911 aa16.28■□□□□ 0.2
CALCOCO2-225ENST00000570513 EIF4G2P78344 907 aaKnown RBP eCLIP16.27■□□□□ 0.2
CALCOCO2-225ENST00000570513 TMEM132EQ6IEE7 984 aa16.27■□□□□ 0.2
CALCOCO2-225ENST00000570513 METP08581 1390 aa16.26■□□□□ 0.19
CALCOCO2-225ENST00000570513 YTHDC2Q9H6S0 1430 aaKnown RBP16.26■□□□□ 0.19
CALCOCO2-225ENST00000570513 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
CALCOCO2-225ENST00000570513 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
CALCOCO2-225ENST00000570513 NCKAP5LQ9HCH0 1330 aa16.25■□□□□ 0.19
CALCOCO2-225ENST00000570513 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
CALCOCO2-225ENST00000570513 SLC26A8Q96RN1 970 aa16.24■□□□□ 0.19
CALCOCO2-225ENST00000570513 KNDC1Q76NI1 1749 aa16.24■□□□□ 0.19
CALCOCO2-225ENST00000570513 LRPPRCP42704 1394 aaKnown RBP16.24■□□□□ 0.19
CALCOCO2-225ENST00000570513 CPS1P31327 1500 aa16.23■□□□□ 0.19
CALCOCO2-225ENST00000570513 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
CALCOCO2-225ENST00000570513 XRN1Q8IZH2 1706 aaKnown RBP16.22■□□□□ 0.19
CALCOCO2-225ENST00000570513 DLC1Q96QB1 1528 aa16.21■□□□□ 0.19
CALCOCO2-225ENST00000570513 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
CALCOCO2-225ENST00000570513 STRCQ7RTU9 1775 aa16.21■□□□□ 0.18
CALCOCO2-225ENST00000570513 TECPR2O15040 1411 aa16.2■□□□□ 0.18
CALCOCO2-225ENST00000570513 PTPRUQ92729 1446 aa16.2■□□□□ 0.18
CALCOCO2-225ENST00000570513 STK26Q9P289 416 aa16.2■□□□□ 0.18
CALCOCO2-225ENST00000570513 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
CALCOCO2-225ENST00000570513 QRICH2Q9H0J4 1663 aa16.2■□□□□ 0.18
CALCOCO2-225ENST00000570513 ST20-MTHFSA0A0A6YYL1 179 aa16.19■□□□□ 0.18
CALCOCO2-225ENST00000570513 TBX22Q9Y458 520 aa16.19■□□□□ 0.18
CALCOCO2-225ENST00000570513 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
CALCOCO2-225ENST00000570513 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
CALCOCO2-225ENST00000570513 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
CALCOCO2-225ENST00000570513 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
CALCOCO2-225ENST00000570513 CENPJQ9HC77 1338 aaPredicted RBP16.17■□□□□ 0.18
CALCOCO2-225ENST00000570513 ROBO2Q9HCK4 1378 aa16.15■□□□□ 0.18
CALCOCO2-225ENST00000570513 TESK2Q96S53 571 aa16.15■□□□□ 0.18
CALCOCO2-225ENST00000570513 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
CALCOCO2-225ENST00000570513 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
CALCOCO2-225ENST00000570513 FAM135BQ49AJ0 1406 aa16.14■□□□□ 0.17
CALCOCO2-225ENST00000570513 PRAM1Q96QH2 718 aa16.14■□□□□ 0.17
CALCOCO2-225ENST00000570513 DISP3Q9P2K9 1392 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms