RNA–Protein interactions for RNA: ENST00000566833.1

CCNDBP1-209, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-209ENST00000566833 ARHGAP23Q9P227 1491 aa19.59■□□□□ 0.73
CCNDBP1-209ENST00000566833 POLR1AO95602 1720 aaPredicted RBP19.59■□□□□ 0.73
CCNDBP1-209ENST00000566833 NCKAP5LQ9HCH0 1330 aa19.58■□□□□ 0.73
CCNDBP1-209ENST00000566833 NEUROD1Q13562 356 aa19.58■□□□□ 0.72
CCNDBP1-209ENST00000566833 SCAF11Q99590 1463 aaKnown RBP19.57■□□□□ 0.72
CCNDBP1-209ENST00000566833 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
CCNDBP1-209ENST00000566833 NEURL4Q96JN8 1562 aa19.57■□□□□ 0.72
CCNDBP1-209ENST00000566833 RPGRIP1LQ68CZ1 1315 aa19.56■□□□□ 0.72
CCNDBP1-209ENST00000566833 BCANQ96GW7 911 aa19.56■□□□□ 0.72
CCNDBP1-209ENST00000566833 SIN3AQ96ST3 1273 aa19.56■□□□□ 0.72
CCNDBP1-209ENST00000566833 ZFYVE9O95405 1425 aa19.54■□□□□ 0.72
CCNDBP1-209ENST00000566833 LTKP29376 864 aa19.54■□□□□ 0.72
CCNDBP1-209ENST00000566833 NUTM2DQ5VT03 806 aaPredicted RBP19.54■□□□□ 0.72
CCNDBP1-209ENST00000566833 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
CCNDBP1-209ENST00000566833 STRCQ7RTU9 1775 aa19.54■□□□□ 0.72
CCNDBP1-209ENST00000566833 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
CCNDBP1-209ENST00000566833 NEXMIFQ5QGS0 1516 aa19.53■□□□□ 0.72
CCNDBP1-209ENST00000566833 NPHP4O75161 1426 aaPredicted RBP19.51■□□□□ 0.71
CCNDBP1-209ENST00000566833 VGFO15240 615 aaPredicted RBP19.51■□□□□ 0.71
CCNDBP1-209ENST00000566833 PPLO60437 1756 aa19.51■□□□□ 0.71
CCNDBP1-209ENST00000566833 IQGAP1P46940 1657 aa19.49■□□□□ 0.71
CCNDBP1-209ENST00000566833 MED14O60244 1454 aa19.48■□□□□ 0.71
CCNDBP1-209ENST00000566833 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
CCNDBP1-209ENST00000566833 PLEKHG1Q9ULL1 1385 aa19.48■□□□□ 0.71
CCNDBP1-209ENST00000566833 DCAF11Q8TEB1 546 aa19.48■□□□□ 0.71
CCNDBP1-209ENST00000566833 IFT172Q9UG01 1749 aa19.48■□□□□ 0.71
CCNDBP1-209ENST00000566833 KDM2AQ9Y2K7 1162 aa19.47■□□□□ 0.71
CCNDBP1-209ENST00000566833 STAC3Q96MF2 364 aa19.44■□□□□ 0.7
CCNDBP1-209ENST00000566833 MYOM2P54296 1465 aa19.43■□□□□ 0.7
CCNDBP1-209ENST00000566833 L3MBTL2Q969R5 705 aa19.43■□□□□ 0.7
CCNDBP1-209ENST00000566833 SLC26A8Q96RN1 970 aa19.42■□□□□ 0.7
CCNDBP1-209ENST00000566833 ADGRF5Q8IZF2 1346 aa19.42■□□□□ 0.7
CCNDBP1-209ENST00000566833 SETBP1Q9Y6X0 1596 aa19.4■□□□□ 0.7
CCNDBP1-209ENST00000566833 DIP2AQ14689 1571 aa19.39■□□□□ 0.69
CCNDBP1-209ENST00000566833 ADAMTS13Q76LX8 1427 aa19.37■□□□□ 0.69
CCNDBP1-209ENST00000566833 TBX22Q9Y458 520 aa19.37■□□□□ 0.69
CCNDBP1-209ENST00000566833 NRXN3Q9Y4C0 1643 aa19.36■□□□□ 0.69
CCNDBP1-209ENST00000566833 PIK3C2GO75747 1445 aa19.36■□□□□ 0.69
CCNDBP1-209ENST00000566833 NRXN1Q9ULB1 1477 aa19.35■□□□□ 0.69
CCNDBP1-209ENST00000566833 TIMELESSQ9UNS1 1208 aa19.35■□□□□ 0.69
CCNDBP1-209ENST00000566833 ALKQ9UM73 1620 aa19.34■□□□□ 0.69
CCNDBP1-209ENST00000566833 LAMC1P11047 1609 aa19.33■□□□□ 0.69
CCNDBP1-209ENST00000566833 CFAP70Q5T0N1 1121 aa19.32■□□□□ 0.68
CCNDBP1-209ENST00000566833 PRAG1Q86YV5 1406 aa19.32■□□□□ 0.68
CCNDBP1-209ENST00000566833 PIK3R4Q99570 1358 aa19.32■□□□□ 0.68
CCNDBP1-209ENST00000566833 ZNF335Q9H4Z2 1342 aaPredicted RBP19.31■□□□□ 0.68
CCNDBP1-209ENST00000566833 C14orf93Q9H972 538 aaKnown RBP19.31■□□□□ 0.68
CCNDBP1-209ENST00000566833 SETD1AO15047 1707 aaKnown RBP19.29■□□□□ 0.68
CCNDBP1-209ENST00000566833 KCNA6P17658 529 aa19.29■□□□□ 0.68
CCNDBP1-209ENST00000566833 METP08581 1390 aa19.29■□□□□ 0.68
CCNDBP1-209ENST00000566833 CHD2O14647 1828 aaKnown RBP19.28■□□□□ 0.68
CCNDBP1-209ENST00000566833 KIAA1210Q9ULL0 1709 aa19.26■□□□□ 0.67
CCNDBP1-209ENST00000566833 TMEM132EQ6IEE7 984 aa19.26■□□□□ 0.67
CCNDBP1-209ENST00000566833 AMOTL2Q9Y2J4 779 aa19.26■□□□□ 0.67
CCNDBP1-209ENST00000566833 NWD1Q149M9 1564 aa19.25■□□□□ 0.67
CCNDBP1-209ENST00000566833 CPS1P31327 1500 aa19.25■□□□□ 0.67
CCNDBP1-209ENST00000566833 STK26Q9P289 416 aa19.24■□□□□ 0.67
CCNDBP1-209ENST00000566833 NBPF8Q3BBV2 869 aa19.23■□□□□ 0.67
CCNDBP1-209ENST00000566833 ASXL1Q8IXJ9 1541 aa19.23■□□□□ 0.67
CCNDBP1-209ENST00000566833 PTPRUQ92729 1446 aa19.23■□□□□ 0.67
CCNDBP1-209ENST00000566833 NKTRP30414 1462 aaKnown RBP19.22■□□□□ 0.67
CCNDBP1-209ENST00000566833 TRPM1Q7Z4N2 1603 aa19.22■□□□□ 0.67
CCNDBP1-209ENST00000566833 LRPPRCP42704 1394 aaKnown RBP19.22■□□□□ 0.67
CCNDBP1-209ENST00000566833 STRCP1A6NGW2 1772 aa19.22■□□□□ 0.67
CCNDBP1-209ENST00000566833 PROSER2Q86WR7 435 aaPredicted RBP19.22■□□□□ 0.67
CCNDBP1-209ENST00000566833 YTHDC2Q9H6S0 1430 aaKnown RBP19.22■□□□□ 0.67
CCNDBP1-209ENST00000566833 ROCK2O75116 1388 aaKnown RBP19.21■□□□□ 0.67
CCNDBP1-209ENST00000566833 XRN1Q8IZH2 1706 aaKnown RBP19.21■□□□□ 0.67
CCNDBP1-209ENST00000566833 LTBP4Q8N2S1 1624 aa19.21■□□□□ 0.67
CCNDBP1-209ENST00000566833 ADGRB1O14514 1584 aa19.2■□□□□ 0.66
CCNDBP1-209ENST00000566833 NBPF1Q3BBV0 1214 aa19.2■□□□□ 0.66
CCNDBP1-209ENST00000566833 RALGAPBQ86X10 1494 aa19.18■□□□□ 0.66
CCNDBP1-209ENST00000566833 KNDC1Q76NI1 1749 aa19.18■□□□□ 0.66
CCNDBP1-209ENST00000566833 ABCC11Q96J66 1382 aa19.18■□□□□ 0.66
CCNDBP1-209ENST00000566833 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
CCNDBP1-209ENST00000566833 TRAK1Q9UPV9 953 aa19.17■□□□□ 0.66
CCNDBP1-209ENST00000566833 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
CCNDBP1-209ENST00000566833 LRRC7Q96NW7 1537 aa19.16■□□□□ 0.66
CCNDBP1-209ENST00000566833 TECPR2O15040 1411 aa19.16■□□□□ 0.66
CCNDBP1-209ENST00000566833 CARD11Q9BXL7 1154 aa19.15■□□□□ 0.66
CCNDBP1-209ENST00000566833 POGKQ9P215 609 aa19.15■□□□□ 0.66
CCNDBP1-209ENST00000566833 TMEM94Q12767 1356 aa19.15■□□□□ 0.66
CCNDBP1-209ENST00000566833 RBM33Q96EV2 1170 aaKnown RBP19.14■□□□□ 0.65
CCNDBP1-209ENST00000566833 ROBO2Q9HCK4 1378 aa19.14■□□□□ 0.65
CCNDBP1-209ENST00000566833 CERKQ8TCT0 537 aa19.13■□□□□ 0.65
CCNDBP1-209ENST00000566833 DLC1Q96QB1 1528 aa19.13■□□□□ 0.65
CCNDBP1-209ENST00000566833 FAM135BQ49AJ0 1406 aa19.11■□□□□ 0.65
CCNDBP1-209ENST00000566833 GPRASP1Q5JY77 1395 aa19.11■□□□□ 0.65
CCNDBP1-209ENST00000566833 WAPLQ7Z5K2 1190 aa19.11■□□□□ 0.65
CCNDBP1-209ENST00000566833 SIRT1Q96EB6 747 aa19.11■□□□□ 0.65
CCNDBP1-209ENST00000566833 PRAM1Q96QH2 718 aa19.11■□□□□ 0.65
CCNDBP1-209ENST00000566833 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
CCNDBP1-209ENST00000566833 ARHGEF28Q8N1W1 1705 aaKnown RBP19.1■□□□□ 0.65
CCNDBP1-209ENST00000566833 NCOA3Q9Y6Q9 1424 aa19.09■□□□□ 0.65
CCNDBP1-209ENST00000566833 MSH6P52701 1360 aa19.09■□□□□ 0.65
CCNDBP1-209ENST00000566833 SAFB2Q14151 953 aaKnown RBP eCLIP19.09■□□□□ 0.65
CCNDBP1-209ENST00000566833 XIRP1Q702N8 1843 aaKnown RBP19.09■□□□□ 0.65
CCNDBP1-209ENST00000566833 IQSEC2Q5JU85 1478 aa19.09■□□□□ 0.65
CCNDBP1-209ENST00000566833 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.64
CCNDBP1-209ENST00000566833 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms