RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 PER1O15534 1290 aaPredicted RBP16.59■□□□□ 0.25
SCAMP2-207ENST00000566480 TMF1P82094 1093 aa16.59■□□□□ 0.25
SCAMP2-207ENST00000566480 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
SCAMP2-207ENST00000566480 CEP152O94986 1710 aa16.59■□□□□ 0.25
SCAMP2-207ENST00000566480 VWDEQ8N2E2 1590 aa16.59■□□□□ 0.25
SCAMP2-207ENST00000566480 MADDQ8WXG6 1647 aa16.58■□□□□ 0.25
SCAMP2-207ENST00000566480 CHGAP10645 457 aaKnown RBP16.58■□□□□ 0.25
SCAMP2-207ENST00000566480 MYBBP1AQ9BQG0 1328 aaKnown RBP16.58■□□□□ 0.24
SCAMP2-207ENST00000566480 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
SCAMP2-207ENST00000566480 LAMC1P11047 1609 aa16.56■□□□□ 0.24
SCAMP2-207ENST00000566480 RALBP1Q15311 655 aa16.56■□□□□ 0.24
SCAMP2-207ENST00000566480 CFAP70Q5T0N1 1121 aa16.56■□□□□ 0.24
SCAMP2-207ENST00000566480 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
SCAMP2-207ENST00000566480 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
SCAMP2-207ENST00000566480 MLECQ14165 292 aa16.55■□□□□ 0.24
SCAMP2-207ENST00000566480 KTN1Q86UP2 1357 aaKnown RBP16.55■□□□□ 0.24
SCAMP2-207ENST00000566480 RNF17Q9BXT8 1623 aaKnown RBP16.55■□□□□ 0.24
SCAMP2-207ENST00000566480 KDM4FA0A1W2PPD8 638 aa16.53■□□□□ 0.24
SCAMP2-207ENST00000566480 EFCAB6Q5THR3 1501 aa16.52■□□□□ 0.24
SCAMP2-207ENST00000566480 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.23
SCAMP2-207ENST00000566480 BRD4O60885 1362 aaPredicted RBP16.51■□□□□ 0.23
SCAMP2-207ENST00000566480 MLH3Q9UHC1 1453 aa16.51■□□□□ 0.23
SCAMP2-207ENST00000566480 WASHC2CQ9Y4E1 1318 aa16.51■□□□□ 0.23
SCAMP2-207ENST00000566480 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
SCAMP2-207ENST00000566480 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
SCAMP2-207ENST00000566480 SCAF11Q99590 1463 aaKnown RBP16.49■□□□□ 0.23
SCAMP2-207ENST00000566480 IQGAP1P46940 1657 aa16.49■□□□□ 0.23
SCAMP2-207ENST00000566480 NUTM2DQ5VT03 806 aaPredicted RBP16.49■□□□□ 0.23
SCAMP2-207ENST00000566480 NPATQ14207 1427 aa16.49■□□□□ 0.23
SCAMP2-207ENST00000566480 MROH2AA6NES4 1674 aa16.48■□□□□ 0.23
SCAMP2-207ENST00000566480 KIF1BO60333 1816 aa16.48■□□□□ 0.23
SCAMP2-207ENST00000566480 LRPPRCP42704 1394 aaKnown RBP16.48■□□□□ 0.23
SCAMP2-207ENST00000566480 NUDCQ9Y266 331 aa16.46■□□□□ 0.23
SCAMP2-207ENST00000566480 RIMS1Q86UR5 1692 aaKnown RBP16.46■□□□□ 0.23
SCAMP2-207ENST00000566480 NOS1P29475 1434 aa16.46■□□□□ 0.22
SCAMP2-207ENST00000566480 STAC3Q96MF2 364 aa16.45■□□□□ 0.22
SCAMP2-207ENST00000566480 DAXXQ9UER7 740 aaPredicted RBP16.44■□□□□ 0.22
SCAMP2-207ENST00000566480 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
SCAMP2-207ENST00000566480 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
SCAMP2-207ENST00000566480 FER1L4A9Z1Z3 1794 aa16.44■□□□□ 0.22
SCAMP2-207ENST00000566480 B4GALNT3Q6L9W6 998 aa16.44■□□□□ 0.22
SCAMP2-207ENST00000566480 ADAMTSL3P82987 1691 aa16.44■□□□□ 0.22
SCAMP2-207ENST00000566480 TMEM132EQ6IEE7 984 aa16.43■□□□□ 0.22
SCAMP2-207ENST00000566480 LMTK2Q8IWU2 1503 aa16.43■□□□□ 0.22
SCAMP2-207ENST00000566480 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
SCAMP2-207ENST00000566480 EIF3AQ14152 1382 aaKnown RBP16.41■□□□□ 0.22
SCAMP2-207ENST00000566480 ABCC3O15438 1527 aa16.4■□□□□ 0.22
SCAMP2-207ENST00000566480 MYOM2P54296 1465 aa16.4■□□□□ 0.22
SCAMP2-207ENST00000566480 CDCA8Q53HL2 280 aa16.4■□□□□ 0.22
SCAMP2-207ENST00000566480 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
SCAMP2-207ENST00000566480 IFT172Q9UG01 1749 aa16.39■□□□□ 0.21
SCAMP2-207ENST00000566480 CLTCQ00610 1675 aaKnown RBP16.39■□□□□ 0.21
SCAMP2-207ENST00000566480 ADGRB3O60242 1522 aa16.38■□□□□ 0.21
SCAMP2-207ENST00000566480 CDCA7LQ96GN5 454 aa16.38■□□□□ 0.21
SCAMP2-207ENST00000566480 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
SCAMP2-207ENST00000566480 CEBPAP49715 358 aaPredicted RBP16.37■□□□□ 0.21
SCAMP2-207ENST00000566480 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
SCAMP2-207ENST00000566480 NEURL4Q96JN8 1562 aa16.37■□□□□ 0.21
SCAMP2-207ENST00000566480 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
SCAMP2-207ENST00000566480 ERVK-7P63135 1459 aa16.36■□□□□ 0.21
SCAMP2-207ENST00000566480 ADAMTS8Q9UP79 889 aa16.36■□□□□ 0.21
SCAMP2-207ENST00000566480 MYOM1P52179 1685 aa16.36■□□□□ 0.21
SCAMP2-207ENST00000566480 CAMSAP1Q5T5Y3 1602 aa16.35■□□□□ 0.21
SCAMP2-207ENST00000566480 SYNMO15061 1565 aa16.34■□□□□ 0.21
SCAMP2-207ENST00000566480 NRXN1Q9ULB1 1477 aa16.34■□□□□ 0.21
SCAMP2-207ENST00000566480 IDI1Q13907 227 aa16.34■□□□□ 0.21
SCAMP2-207ENST00000566480 ERICH6BQ5W0A0 696 aa16.34■□□□□ 0.21
SCAMP2-207ENST00000566480 C14orf93Q9H972 538 aaKnown RBP16.34■□□□□ 0.21
SCAMP2-207ENST00000566480 RBM19Q9Y4C8 960 aaKnown RBP16.34■□□□□ 0.21
SCAMP2-207ENST00000566480 CENPJQ9HC77 1338 aaPredicted RBP16.33■□□□□ 0.21
SCAMP2-207ENST00000566480 KDM5AP29375 1690 aaKnown RBP16.33■□□□□ 0.21
SCAMP2-207ENST00000566480 PIK3C2GO75747 1445 aa16.33■□□□□ 0.2
SCAMP2-207ENST00000566480 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.2
SCAMP2-207ENST00000566480 C3P01024 1663 aa16.33■□□□□ 0.2
SCAMP2-207ENST00000566480 PPLO60437 1756 aa16.33■□□□□ 0.2
SCAMP2-207ENST00000566480 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCAMP2-207ENST00000566480 AGLP35573 1532 aa16.32■□□□□ 0.2
SCAMP2-207ENST00000566480 ASXL1Q8IXJ9 1541 aa16.31■□□□□ 0.2
SCAMP2-207ENST00000566480 FBXO31Q5XUX0 539 aaPredicted RBP16.31■□□□□ 0.2
SCAMP2-207ENST00000566480 PTPRMP28827 1452 aa16.31■□□□□ 0.2
SCAMP2-207ENST00000566480 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
SCAMP2-207ENST00000566480 SLC12A5Q9H2X9 1139 aa16.29■□□□□ 0.2
SCAMP2-207ENST00000566480 PRKCSHP14314 528 aaPredicted RBP16.29■□□□□ 0.2
SCAMP2-207ENST00000566480 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCAMP2-207ENST00000566480 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
SCAMP2-207ENST00000566480 TNNT2P45379 298 aaPredicted RBP16.28■□□□□ 0.2
SCAMP2-207ENST00000566480 STK26Q9P289 416 aa16.28■□□□□ 0.2
SCAMP2-207ENST00000566480 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.2
SCAMP2-207ENST00000566480 RCAN3Q9UKA8 241 aa16.27■□□□□ 0.2
SCAMP2-207ENST00000566480 ADGRB1O14514 1584 aa16.27■□□□□ 0.19
SCAMP2-207ENST00000566480 RPGRIP1LQ68CZ1 1315 aa16.26■□□□□ 0.19
SCAMP2-207ENST00000566480 VGFO15240 615 aaPredicted RBP16.26■□□□□ 0.19
SCAMP2-207ENST00000566480 CCDC136Q96JN2 1154 aa16.25■□□□□ 0.19
SCAMP2-207ENST00000566480 SETBP1Q9Y6X0 1596 aa16.25■□□□□ 0.19
SCAMP2-207ENST00000566480 PIK3C2BO00750 1634 aa16.24■□□□□ 0.19
SCAMP2-207ENST00000566480 RRP1P56182 461 aaKnown RBP16.24■□□□□ 0.19
SCAMP2-207ENST00000566480 MYO5BQ9ULV0 1848 aa16.24■□□□□ 0.19
SCAMP2-207ENST00000566480 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
SCAMP2-207ENST00000566480 QRICH2Q9H0J4 1663 aa16.24■□□□□ 0.19
SCAMP2-207ENST00000566480 PLIN1O60240 522 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms