RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 POLR1AO95602 1720 aaPredicted RBP21.43■■□□□ 1.02
SPG7-213ENST00000566221 SLIT1O75093 1534 aa21.43■■□□□ 1.02
SPG7-213ENST00000566221 TONSLQ96HA7 1378 aa21.42■■□□□ 1.02
SPG7-213ENST00000566221 ARHGAP23Q9P227 1491 aa21.4■■□□□ 1.02
SPG7-213ENST00000566221 ZNF326Q5BKZ1 582 aaKnown RBP21.39■■□□□ 1.01
SPG7-213ENST00000566221 ZFYVE9O95405 1425 aa21.38■■□□□ 1.01
SPG7-213ENST00000566221 RGL3Q3MIN7 710 aa21.38■■□□□ 1.01
SPG7-213ENST00000566221 THEMISQ8N1K5 641 aaPredicted RBP21.38■■□□□ 1.01
SPG7-213ENST00000566221 MYOM2P54296 1465 aa21.38■■□□□ 1.01
SPG7-213ENST00000566221 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
SPG7-213ENST00000566221 TMEM2Q9UHN6 1383 aa21.37■■□□□ 1.01
SPG7-213ENST00000566221 RPGRIP1LQ68CZ1 1315 aa21.37■■□□□ 1.01
SPG7-213ENST00000566221 TIMELESSQ9UNS1 1208 aa21.37■■□□□ 1.01
SPG7-213ENST00000566221 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
SPG7-213ENST00000566221 SCAF11Q99590 1463 aaKnown RBP21.32■■□□□ 1
SPG7-213ENST00000566221 L3MBTL2Q969R5 705 aa21.32■■□□□ 1
SPG7-213ENST00000566221 LAMC1P11047 1609 aa21.31■■□□□ 1
SPG7-213ENST00000566221 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.31■■□□□ 1
SPG7-213ENST00000566221 STAC3Q96MF2 364 aa21.31■■□□□ 1
SPG7-213ENST00000566221 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
SPG7-213ENST00000566221 IQGAP1P46940 1657 aa21.31■■□□□ 1
SPG7-213ENST00000566221 ZEB1P37275 1124 aaPredicted RBP21.3■■□□□ 1
SPG7-213ENST00000566221 HDGFP51858 240 aaKnown RBP21.3■■□□□ 1
SPG7-213ENST00000566221 DCAF11Q8TEB1 546 aa21.3■■□□□ 1
SPG7-213ENST00000566221 KIAA1210Q9ULL0 1709 aa21.29■■□□□ 1
SPG7-213ENST00000566221 EID1Q9Y6B2 187 aa21.29■■□□□ 1
SPG7-213ENST00000566221 STRCQ7RTU9 1775 aa21.28■■□□□ 1
SPG7-213ENST00000566221 SETBP1Q9Y6X0 1596 aa21.27■■□□□ 1
SPG7-213ENST00000566221 NRXN3Q9Y4C0 1643 aa21.27■■□□□ 1
SPG7-213ENST00000566221 VGFO15240 615 aaPredicted RBP21.27■■□□□ 1
SPG7-213ENST00000566221 TRPM1Q7Z4N2 1603 aa21.26■□□□□ 0.99
SPG7-213ENST00000566221 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
SPG7-213ENST00000566221 PIK3C2GO75747 1445 aa21.26■□□□□ 0.99
SPG7-213ENST00000566221 PRAG1Q86YV5 1406 aa21.26■□□□□ 0.99
SPG7-213ENST00000566221 SETD1AO15047 1707 aaKnown RBP21.26■□□□□ 0.99
SPG7-213ENST00000566221 PLEKHG1Q9ULL1 1385 aa21.25■□□□□ 0.99
SPG7-213ENST00000566221 ANKLE2Q86XL3 938 aa21.25■□□□□ 0.99
SPG7-213ENST00000566221 DIP2AQ14689 1571 aa21.24■□□□□ 0.99
SPG7-213ENST00000566221 TXNDC2Q86VQ3 553 aa21.24■□□□□ 0.99
SPG7-213ENST00000566221 KDM2AQ9Y2K7 1162 aa21.24■□□□□ 0.99
SPG7-213ENST00000566221 MED14O60244 1454 aa21.24■□□□□ 0.99
SPG7-213ENST00000566221 LTKP29376 864 aa21.23■□□□□ 0.99
SPG7-213ENST00000566221 NUTM2DQ5VT03 806 aaPredicted RBP21.23■□□□□ 0.99
SPG7-213ENST00000566221 ADGRF5Q8IZF2 1346 aa21.23■□□□□ 0.99
SPG7-213ENST00000566221 ALKQ9UM73 1620 aa21.2■□□□□ 0.98
SPG7-213ENST00000566221 NPHP4O75161 1426 aaPredicted RBP21.2■□□□□ 0.98
SPG7-213ENST00000566221 RALGAPBQ86X10 1494 aa21.18■□□□□ 0.98
SPG7-213ENST00000566221 NCKAP5LQ9HCH0 1330 aa21.16■□□□□ 0.98
SPG7-213ENST00000566221 ADAMTS13Q76LX8 1427 aa21.15■□□□□ 0.98
SPG7-213ENST00000566221 ASXL1Q8IXJ9 1541 aa21.14■□□□□ 0.97
SPG7-213ENST00000566221 NBPF8Q3BBV2 869 aa21.13■□□□□ 0.97
SPG7-213ENST00000566221 BCANQ96GW7 911 aa21.13■□□□□ 0.97
SPG7-213ENST00000566221 ADGRB1O14514 1584 aa21.12■□□□□ 0.97
SPG7-213ENST00000566221 CHD2O14647 1828 aaKnown RBP21.12■□□□□ 0.97
SPG7-213ENST00000566221 KNDC1Q76NI1 1749 aa21.12■□□□□ 0.97
SPG7-213ENST00000566221 C14orf93Q9H972 538 aaKnown RBP21.11■□□□□ 0.97
SPG7-213ENST00000566221 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
SPG7-213ENST00000566221 ROCK2O75116 1388 aaKnown RBP21.09■□□□□ 0.97
SPG7-213ENST00000566221 CFAP70Q5T0N1 1121 aa21.08■□□□□ 0.97
SPG7-213ENST00000566221 XRN1Q8IZH2 1706 aaKnown RBP21.08■□□□□ 0.97
SPG7-213ENST00000566221 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.96
SPG7-213ENST00000566221 TBX22Q9Y458 520 aa21.07■□□□□ 0.96
SPG7-213ENST00000566221 PIK3R4Q99570 1358 aa21.07■□□□□ 0.96
SPG7-213ENST00000566221 NWD1Q149M9 1564 aa21.06■□□□□ 0.96
SPG7-213ENST00000566221 UBAP1LF5GYI3 381 aa21.06■□□□□ 0.96
SPG7-213ENST00000566221 SLC26A8Q96RN1 970 aa21.06■□□□□ 0.96
SPG7-213ENST00000566221 ARHGEF28Q8N1W1 1705 aaKnown RBP21.06■□□□□ 0.96
SPG7-213ENST00000566221 METP08581 1390 aa21.04■□□□□ 0.96
SPG7-213ENST00000566221 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
SPG7-213ENST00000566221 CPS1P31327 1500 aa21.04■□□□□ 0.96
SPG7-213ENST00000566221 IQSEC2Q5JU85 1478 aa21.03■□□□□ 0.96
SPG7-213ENST00000566221 YTHDC2Q9H6S0 1430 aaKnown RBP21.03■□□□□ 0.96
SPG7-213ENST00000566221 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.96
SPG7-213ENST00000566221 STRCP1A6NGW2 1772 aa21.02■□□□□ 0.96
SPG7-213ENST00000566221 DLC1Q96QB1 1528 aa21.01■□□□□ 0.95
SPG7-213ENST00000566221 LRPPRCP42704 1394 aaKnown RBP21■□□□□ 0.95
SPG7-213ENST00000566221 TECPR2O15040 1411 aa21■□□□□ 0.95
SPG7-213ENST00000566221 PTPRUQ92729 1446 aa20.99■□□□□ 0.95
SPG7-213ENST00000566221 TMEM132EQ6IEE7 984 aa20.99■□□□□ 0.95
SPG7-213ENST00000566221 CARD11Q9BXL7 1154 aa20.99■□□□□ 0.95
SPG7-213ENST00000566221 NKTRP30414 1462 aaKnown RBP20.98■□□□□ 0.95
SPG7-213ENST00000566221 PTCH1Q13635 1447 aa20.97■□□□□ 0.95
SPG7-213ENST00000566221 QRICH2Q9H0J4 1663 aa20.97■□□□□ 0.95
SPG7-213ENST00000566221 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
SPG7-213ENST00000566221 ABCC11Q96J66 1382 aa20.96■□□□□ 0.95
SPG7-213ENST00000566221 USP47Q96K76 1375 aa20.94■□□□□ 0.94
SPG7-213ENST00000566221 ZNF335Q9H4Z2 1342 aaPredicted RBP20.93■□□□□ 0.94
SPG7-213ENST00000566221 KCNA6P17658 529 aa20.92■□□□□ 0.94
SPG7-213ENST00000566221 STK26Q9P289 416 aa20.92■□□□□ 0.94
SPG7-213ENST00000566221 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
SPG7-213ENST00000566221 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
SPG7-213ENST00000566221 FAM135BQ49AJ0 1406 aa20.92■□□□□ 0.94
SPG7-213ENST00000566221 TRAK1Q9UPV9 953 aa20.91■□□□□ 0.94
SPG7-213ENST00000566221 XIRP1Q702N8 1843 aaKnown RBP20.9■□□□□ 0.94
SPG7-213ENST00000566221 ROBO2Q9HCK4 1378 aa20.89■□□□□ 0.93
SPG7-213ENST00000566221 NALCNQ8IZF0 1738 aa20.89■□□□□ 0.93
SPG7-213ENST00000566221 EIF4G2P78344 907 aaKnown RBP eCLIP20.87■□□□□ 0.93
SPG7-213ENST00000566221 SIRT1Q96EB6 747 aa20.87■□□□□ 0.93
SPG7-213ENST00000566221 ADGRB2O60241 1585 aa20.86■□□□□ 0.93
SPG7-213ENST00000566221 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms