RNA–Protein interactions for RNA: ENST00000565986.1

PDXDC1-212, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-212ENST00000565986 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
PDXDC1-212ENST00000565986 PPP1R15AO75807 674 aaPredicted RBP19■□□□□ 0.63
PDXDC1-212ENST00000565986 HDGFP51858 240 aaKnown RBP19■□□□□ 0.63
PDXDC1-212ENST00000565986 ZNF326Q5BKZ1 582 aaKnown RBP18.99■□□□□ 0.63
PDXDC1-212ENST00000565986 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.99■□□□□ 0.63
PDXDC1-212ENST00000565986 ZNF335Q9H4Z2 1342 aaPredicted RBP18.98■□□□□ 0.63
PDXDC1-212ENST00000565986 LTBP4Q8N2S1 1624 aa18.96■□□□□ 0.63
PDXDC1-212ENST00000565986 PLEKHG1Q9ULL1 1385 aa18.96■□□□□ 0.63
PDXDC1-212ENST00000565986 BCANQ96GW7 911 aa18.95■□□□□ 0.62
PDXDC1-212ENST00000565986 NEXMIFQ5QGS0 1516 aa18.95■□□□□ 0.62
PDXDC1-212ENST00000565986 NUTM2DQ5VT03 806 aaPredicted RBP18.93■□□□□ 0.62
PDXDC1-212ENST00000565986 CPS1P31327 1500 aa18.91■□□□□ 0.62
PDXDC1-212ENST00000565986 CERKQ8TCT0 537 aa18.91■□□□□ 0.62
PDXDC1-212ENST00000565986 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
PDXDC1-212ENST00000565986 ANKRD30BQ9BXX2 1392 aa18.91■□□□□ 0.62
PDXDC1-212ENST00000565986 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
PDXDC1-212ENST00000565986 SLC26A8Q96RN1 970 aa18.9■□□□□ 0.62
PDXDC1-212ENST00000565986 SPATA31E1Q6ZUB1 1445 aa18.9■□□□□ 0.62
PDXDC1-212ENST00000565986 PPLO60437 1756 aa18.88■□□□□ 0.61
PDXDC1-212ENST00000565986 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
PDXDC1-212ENST00000565986 SETBP1Q9Y6X0 1596 aa18.88■□□□□ 0.61
PDXDC1-212ENST00000565986 STRCP1A6NGW2 1772 aa18.87■□□□□ 0.61
PDXDC1-212ENST00000565986 IQSEC2Q5JU85 1478 aa18.86■□□□□ 0.61
PDXDC1-212ENST00000565986 ADAMTS13Q76LX8 1427 aa18.86■□□□□ 0.61
PDXDC1-212ENST00000565986 RGL3Q3MIN7 710 aa18.86■□□□□ 0.61
PDXDC1-212ENST00000565986 NRXN3Q9Y4C0 1643 aa18.85■□□□□ 0.61
PDXDC1-212ENST00000565986 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
PDXDC1-212ENST00000565986 IFT172Q9UG01 1749 aa18.84■□□□□ 0.61
PDXDC1-212ENST00000565986 NWD1Q149M9 1564 aa18.84■□□□□ 0.61
PDXDC1-212ENST00000565986 TBX22Q9Y458 520 aa18.83■□□□□ 0.6
PDXDC1-212ENST00000565986 KCNA6P17658 529 aa18.81■□□□□ 0.6
PDXDC1-212ENST00000565986 NKTRP30414 1462 aaKnown RBP18.81■□□□□ 0.6
PDXDC1-212ENST00000565986 PIK3R4Q99570 1358 aa18.81■□□□□ 0.6
PDXDC1-212ENST00000565986 LRRC7Q96NW7 1537 aa18.8■□□□□ 0.6
PDXDC1-212ENST00000565986 CHD2O14647 1828 aaKnown RBP18.8■□□□□ 0.6
PDXDC1-212ENST00000565986 FBXO41Q8TF61 875 aa18.78■□□□□ 0.6
PDXDC1-212ENST00000565986 DHX57Q6P158 1386 aaKnown RBP18.78■□□□□ 0.6
PDXDC1-212ENST00000565986 MYOM2P54296 1465 aa18.77■□□□□ 0.59
PDXDC1-212ENST00000565986 ALKQ9UM73 1620 aa18.76■□□□□ 0.59
PDXDC1-212ENST00000565986 ADGRF5Q8IZF2 1346 aa18.75■□□□□ 0.59
PDXDC1-212ENST00000565986 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
PDXDC1-212ENST00000565986 METP08581 1390 aa18.74■□□□□ 0.59
PDXDC1-212ENST00000565986 PCGF6Q9BYE7 350 aa18.74■□□□□ 0.59
PDXDC1-212ENST00000565986 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
PDXDC1-212ENST00000565986 PIK3C2GO75747 1445 aa18.74■□□□□ 0.59
PDXDC1-212ENST00000565986 TMEM94Q12767 1356 aa18.73■□□□□ 0.59
PDXDC1-212ENST00000565986 PROSER2Q86WR7 435 aaPredicted RBP18.73■□□□□ 0.59
PDXDC1-212ENST00000565986 PTPRUQ92729 1446 aa18.73■□□□□ 0.59
PDXDC1-212ENST00000565986 XIRP1Q702N8 1843 aaKnown RBP18.72■□□□□ 0.59
PDXDC1-212ENST00000565986 NRXN1Q9ULB1 1477 aa18.71■□□□□ 0.59
PDXDC1-212ENST00000565986 UBAP1LF5GYI3 381 aa18.71■□□□□ 0.59
PDXDC1-212ENST00000565986 ILDR1Q86SU0 546 aaPredicted RBP18.71■□□□□ 0.59
PDXDC1-212ENST00000565986 AMOTL2Q9Y2J4 779 aa18.71■□□□□ 0.59
PDXDC1-212ENST00000565986 LAMC1P11047 1609 aa18.71■□□□□ 0.58
PDXDC1-212ENST00000565986 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
PDXDC1-212ENST00000565986 TOM1O60784 492 aa18.67■□□□□ 0.58
PDXDC1-212ENST00000565986 RBM33Q96EV2 1170 aaKnown RBP18.67■□□□□ 0.58
PDXDC1-212ENST00000565986 STAC3Q96MF2 364 aa18.67■□□□□ 0.58
PDXDC1-212ENST00000565986 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
PDXDC1-212ENST00000565986 NCOA3Q9Y6Q9 1424 aa18.66■□□□□ 0.58
PDXDC1-212ENST00000565986 ASXL1Q8IXJ9 1541 aa18.65■□□□□ 0.58
PDXDC1-212ENST00000565986 C14orf37Q86TY3 774 aa18.65■□□□□ 0.58
PDXDC1-212ENST00000565986 MSH6P52701 1360 aa18.65■□□□□ 0.58
PDXDC1-212ENST00000565986 PTCH1Q13635 1447 aa18.65■□□□□ 0.58
PDXDC1-212ENST00000565986 PRAG1Q86YV5 1406 aa18.65■□□□□ 0.58
PDXDC1-212ENST00000565986 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
PDXDC1-212ENST00000565986 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
PDXDC1-212ENST00000565986 C14orf93Q9H972 538 aaKnown RBP18.62■□□□□ 0.57
PDXDC1-212ENST00000565986 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
PDXDC1-212ENST00000565986 KNDC1Q76NI1 1749 aa18.61■□□□□ 0.57
PDXDC1-212ENST00000565986 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
PDXDC1-212ENST00000565986 CFAP70Q5T0N1 1121 aa18.61■□□□□ 0.57
PDXDC1-212ENST00000565986 ROBO2Q9HCK4 1378 aa18.6■□□□□ 0.57
PDXDC1-212ENST00000565986 PIP4K2BP78356 416 aa18.6■□□□□ 0.57
PDXDC1-212ENST00000565986 TMEM132EQ6IEE7 984 aa18.6■□□□□ 0.57
PDXDC1-212ENST00000565986 TECPR2O15040 1411 aa18.59■□□□□ 0.57
PDXDC1-212ENST00000565986 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
PDXDC1-212ENST00000565986 STK26Q9P289 416 aa18.59■□□□□ 0.57
PDXDC1-212ENST00000565986 NALCNQ8IZF0 1738 aa18.58■□□□□ 0.57
PDXDC1-212ENST00000565986 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.57
PDXDC1-212ENST00000565986 ADGRL3Q9HAR2 1447 aa18.57■□□□□ 0.56
PDXDC1-212ENST00000565986 ABCC11Q96J66 1382 aa18.57■□□□□ 0.56
PDXDC1-212ENST00000565986 ADGRB1O14514 1584 aa18.57■□□□□ 0.56
PDXDC1-212ENST00000565986 L3MBTL2Q969R5 705 aa18.57■□□□□ 0.56
PDXDC1-212ENST00000565986 DCCP43146 1447 aa18.57■□□□□ 0.56
PDXDC1-212ENST00000565986 C19orf44Q9H6X5 657 aa18.56■□□□□ 0.56
PDXDC1-212ENST00000565986 KIAA1210Q9ULL0 1709 aa18.56■□□□□ 0.56
PDXDC1-212ENST00000565986 ATF3P18847 181 aa18.55■□□□□ 0.56
PDXDC1-212ENST00000565986 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
PDXDC1-212ENST00000565986 CADPS2Q86UW7 1296 aa18.54■□□□□ 0.56
PDXDC1-212ENST00000565986 FAM135BQ49AJ0 1406 aa18.52■□□□□ 0.56
PDXDC1-212ENST00000565986 DLC1Q96QB1 1528 aa18.52■□□□□ 0.56
PDXDC1-212ENST00000565986 ROBO1Q9Y6N7 1651 aa18.5■□□□□ 0.55
PDXDC1-212ENST00000565986 SLAIN2Q9P270 581 aa18.5■□□□□ 0.55
PDXDC1-212ENST00000565986 CLSPNQ9HAW4 1339 aa18.49■□□□□ 0.55
PDXDC1-212ENST00000565986 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
PDXDC1-212ENST00000565986 PLEKHH1Q9ULM0 1364 aa18.49■□□□□ 0.55
PDXDC1-212ENST00000565986 CDC42BPGQ6DT37 1551 aa18.49■□□□□ 0.55
PDXDC1-212ENST00000565986 SIRT1Q96EB6 747 aa18.48■□□□□ 0.55
PDXDC1-212ENST00000565986 TRAK1Q9UPV9 953 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms