RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 HDGFP51858 240 aaKnown RBP27.57■■■□□ 2
PKD1-229ENST00000564890 PPP1R15AO75807 674 aaPredicted RBP27.56■■■□□ 2
PKD1-229ENST00000564890 HRCP23327 699 aa27.56■■■□□ 2
PKD1-229ENST00000564890 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.55■■■□□ 2
PKD1-229ENST00000564890 ZNF326Q5BKZ1 582 aaKnown RBP27.53■■■□□ 2
PKD1-229ENST00000564890 NUTM2DQ5VT03 806 aaPredicted RBP27.53■■■□□ 2
PKD1-229ENST00000564890 BCANQ96GW7 911 aa27.52■■■□□ 2
PKD1-229ENST00000564890 KIF1BO60333 1816 aa27.52■■■□□ 2
PKD1-229ENST00000564890 PLEKHG1Q9ULL1 1385 aa27.51■■□□□ 1.99
PKD1-229ENST00000564890 SENP3Q9H4L4 574 aaPredicted RBP27.5■■□□□ 1.99
PKD1-229ENST00000564890 SLC26A8Q96RN1 970 aa27.49■■□□□ 1.99
PKD1-229ENST00000564890 CCDC144AA2RUR9 1427 aa27.49■■□□□ 1.99
PKD1-229ENST00000564890 CPS1P31327 1500 aa27.46■■□□□ 1.99
PKD1-229ENST00000564890 FBXO41Q8TF61 875 aa27.46■■□□□ 1.99
PKD1-229ENST00000564890 ILDR1Q86SU0 546 aaPredicted RBP27.45■■□□□ 1.98
PKD1-229ENST00000564890 IQSEC2Q5JU85 1478 aa27.44■■□□□ 1.98
PKD1-229ENST00000564890 STRCP1A6NGW2 1772 aa27.43■■□□□ 1.98
PKD1-229ENST00000564890 NEXMIFQ5QGS0 1516 aa27.42■■□□□ 1.98
PKD1-229ENST00000564890 TRIM26Q12899 539 aaPredicted RBP27.4■■□□□ 1.98
PKD1-229ENST00000564890 ADAMTS13Q76LX8 1427 aa27.38■■□□□ 1.97
PKD1-229ENST00000564890 TBX22Q9Y458 520 aa27.37■■□□□ 1.97
PKD1-229ENST00000564890 RPGRIP1LQ68CZ1 1315 aa27.37■■□□□ 1.97
PKD1-229ENST00000564890 SPATA31E1Q6ZUB1 1445 aa27.36■■□□□ 1.97
PKD1-229ENST00000564890 KCNA6P17658 529 aa27.36■■□□□ 1.97
PKD1-229ENST00000564890 ANKRD30BQ9BXX2 1392 aa27.35■■□□□ 1.97
PKD1-229ENST00000564890 DIP2AQ14689 1571 aa27.35■■□□□ 1.97
PKD1-229ENST00000564890 RGL3Q3MIN7 710 aa27.34■■□□□ 1.97
PKD1-229ENST00000564890 LRRC7Q96NW7 1537 aa27.34■■□□□ 1.97
PKD1-229ENST00000564890 SETBP1Q9Y6X0 1596 aa27.34■■□□□ 1.97
PKD1-229ENST00000564890 NRXN3Q9Y4C0 1643 aa27.32■■□□□ 1.96
PKD1-229ENST00000564890 VGFO15240 615 aaPredicted RBP27.32■■□□□ 1.96
PKD1-229ENST00000564890 PPLO60437 1756 aa27.31■■□□□ 1.96
PKD1-229ENST00000564890 NWD1Q149M9 1564 aa27.31■■□□□ 1.96
PKD1-229ENST00000564890 PIK3R4Q99570 1358 aa27.27■■□□□ 1.96
PKD1-229ENST00000564890 CHD2O14647 1828 aaKnown RBP27.27■■□□□ 1.96
PKD1-229ENST00000564890 NKTRP30414 1462 aaKnown RBP27.26■■□□□ 1.95
PKD1-229ENST00000564890 UBAP1LF5GYI3 381 aa27.26■■□□□ 1.95
PKD1-229ENST00000564890 PROSER2Q86WR7 435 aaPredicted RBP27.24■■□□□ 1.95
PKD1-229ENST00000564890 TMEM94Q12767 1356 aa27.22■■□□□ 1.95
PKD1-229ENST00000564890 IFT172Q9UG01 1749 aa27.22■■□□□ 1.95
PKD1-229ENST00000564890 PTPRUQ92729 1446 aa27.22■■□□□ 1.95
PKD1-229ENST00000564890 METP08581 1390 aa27.22■■□□□ 1.95
PKD1-229ENST00000564890 ADGRF5Q8IZF2 1346 aa27.21■■□□□ 1.95
PKD1-229ENST00000564890 XIRP1Q702N8 1843 aaKnown RBP27.2■■□□□ 1.95
PKD1-229ENST00000564890 RBM33Q96EV2 1170 aaKnown RBP27.2■■□□□ 1.94
PKD1-229ENST00000564890 AMOTL2Q9Y2J4 779 aa27.19■■□□□ 1.94
PKD1-229ENST00000564890 TOM1O60784 492 aa27.18■■□□□ 1.94
PKD1-229ENST00000564890 ALKQ9UM73 1620 aa27.18■■□□□ 1.94
PKD1-229ENST00000564890 SETD1AO15047 1707 aaKnown RBP27.15■■□□□ 1.94
PKD1-229ENST00000564890 XRN1Q8IZH2 1706 aaKnown RBP27.14■■□□□ 1.94
PKD1-229ENST00000564890 MYOM2P54296 1465 aa27.13■■□□□ 1.93
PKD1-229ENST00000564890 PIP4K2BP78356 416 aa27.12■■□□□ 1.93
PKD1-229ENST00000564890 PIK3C2GO75747 1445 aa27.12■■□□□ 1.93
PKD1-229ENST00000564890 SCAF1Q9H7N4 1312 aaKnown RBP27.11■■□□□ 1.93
PKD1-229ENST00000564890 DHX57Q6P158 1386 aaKnown RBP27.1■■□□□ 1.93
PKD1-229ENST00000564890 NRXN1Q9ULB1 1477 aa27.09■■□□□ 1.93
PKD1-229ENST00000564890 MSH6P52701 1360 aa27.09■■□□□ 1.93
PKD1-229ENST00000564890 NCOA3Q9Y6Q9 1424 aa27.08■■□□□ 1.93
PKD1-229ENST00000564890 C14orf37Q86TY3 774 aa27.07■■□□□ 1.92
PKD1-229ENST00000564890 DCAF11Q8TEB1 546 aa27.07■■□□□ 1.92
PKD1-229ENST00000564890 KDM2AQ9Y2K7 1162 aa27.06■■□□□ 1.92
PKD1-229ENST00000564890 C14orf93Q9H972 538 aaKnown RBP27.03■■□□□ 1.92
PKD1-229ENST00000564890 STAC3Q96MF2 364 aa27.02■■□□□ 1.92
PKD1-229ENST00000564890 ASXL1Q8IXJ9 1541 aa27.01■■□□□ 1.91
PKD1-229ENST00000564890 PTCH1Q13635 1447 aa27.01■■□□□ 1.91
PKD1-229ENST00000564890 CFAP70Q5T0N1 1121 aa27.01■■□□□ 1.91
PKD1-229ENST00000564890 TMEM132EQ6IEE7 984 aa27.01■■□□□ 1.91
PKD1-229ENST00000564890 PRAG1Q86YV5 1406 aa27■■□□□ 1.91
PKD1-229ENST00000564890 ROBO2Q9HCK4 1378 aa27■■□□□ 1.91
PKD1-229ENST00000564890 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
PKD1-229ENST00000564890 C19orf44Q9H6X5 657 aa27■■□□□ 1.91
PKD1-229ENST00000564890 LAMC1P11047 1609 aa26.99■■□□□ 1.91
PKD1-229ENST00000564890 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
PKD1-229ENST00000564890 STK26Q9P289 416 aa26.98■■□□□ 1.91
PKD1-229ENST00000564890 LRPPRCP42704 1394 aaKnown RBP26.97■■□□□ 1.91
PKD1-229ENST00000564890 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.96■■□□□ 1.91
PKD1-229ENST00000564890 NEUROD1Q13562 356 aa26.96■■□□□ 1.91
PKD1-229ENST00000564890 ATF3P18847 181 aa26.95■■□□□ 1.9
PKD1-229ENST00000564890 YTHDC2Q9H6S0 1430 aaKnown RBP26.94■■□□□ 1.9
PKD1-229ENST00000564890 CADPS2Q86UW7 1296 aa26.94■■□□□ 1.9
PKD1-229ENST00000564890 TECPR2O15040 1411 aa26.93■■□□□ 1.9
PKD1-229ENST00000564890 ADGRL3Q9HAR2 1447 aa26.93■■□□□ 1.9
PKD1-229ENST00000564890 SLAIN2Q9P270 581 aa26.93■■□□□ 1.9
PKD1-229ENST00000564890 ABCC11Q96J66 1382 aa26.93■■□□□ 1.9
PKD1-229ENST00000564890 HSPA1LP34931 641 aa26.92■■□□□ 1.9
PKD1-229ENST00000564890 DCCP43146 1447 aa26.91■■□□□ 1.9
PKD1-229ENST00000564890 FAM135BQ49AJ0 1406 aa26.91■■□□□ 1.9
PKD1-229ENST00000564890 KNDC1Q76NI1 1749 aa26.9■■□□□ 1.9
PKD1-229ENST00000564890 NALCNQ8IZF0 1738 aa26.9■■□□□ 1.9
PKD1-229ENST00000564890 L3MBTL2Q969R5 705 aa26.89■■□□□ 1.9
PKD1-229ENST00000564890 ADGRB1O14514 1584 aa26.88■■□□□ 1.89
PKD1-229ENST00000564890 ROBO1Q9Y6N7 1651 aa26.87■■□□□ 1.89
PKD1-229ENST00000564890 WAPLQ7Z5K2 1190 aa26.87■■□□□ 1.89
PKD1-229ENST00000564890 PLEKHH1Q9ULM0 1364 aa26.84■■□□□ 1.89
PKD1-229ENST00000564890 SIRT1Q96EB6 747 aa26.83■■□□□ 1.89
PKD1-229ENST00000564890 MST1RQ04912 1400 aa26.82■■□□□ 1.88
PKD1-229ENST00000564890 TRAK1Q9UPV9 953 aa26.8■■□□□ 1.88
PKD1-229ENST00000564890 DLC1Q96QB1 1528 aa26.8■■□□□ 1.88
PKD1-229ENST00000564890 KIAA1210Q9ULL0 1709 aa26.79■■□□□ 1.88
PKD1-229ENST00000564890 PRAM1Q96QH2 718 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms