RNA–Protein interactions for RNA: ENST00000564475.5

FANCA-215, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2

Gene FANCA, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-215ENST00000564475 RGL3Q3MIN7 710 aa17.03■□□□□ 0.32
FANCA-215ENST00000564475 POLR1AO95602 1720 aaPredicted RBP17.03■□□□□ 0.32
FANCA-215ENST00000564475 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
FANCA-215ENST00000564475 ANKLE2Q86XL3 938 aa17.02■□□□□ 0.32
FANCA-215ENST00000564475 IFT172Q9UG01 1749 aa17.01■□□□□ 0.31
FANCA-215ENST00000564475 HSPA2P54652 639 aa17.01■□□□□ 0.31
FANCA-215ENST00000564475 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
FANCA-215ENST00000564475 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
FANCA-215ENST00000564475 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
FANCA-215ENST00000564475 SCAF11Q99590 1463 aaKnown RBP17■□□□□ 0.31
FANCA-215ENST00000564475 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
FANCA-215ENST00000564475 TXNDC2Q86VQ3 553 aa17■□□□□ 0.31
FANCA-215ENST00000564475 TONSLQ96HA7 1378 aa17■□□□□ 0.31
FANCA-215ENST00000564475 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
FANCA-215ENST00000564475 TIMELESSQ9UNS1 1208 aa16.98■□□□□ 0.31
FANCA-215ENST00000564475 DCAF11Q8TEB1 546 aa16.96■□□□□ 0.31
FANCA-215ENST00000564475 MYOM2P54296 1465 aa16.96■□□□□ 0.31
FANCA-215ENST00000564475 STRCQ7RTU9 1775 aa16.96■□□□□ 0.31
FANCA-215ENST00000564475 LTKP29376 864 aa16.95■□□□□ 0.3
FANCA-215ENST00000564475 MED14O60244 1454 aa16.94■□□□□ 0.3
FANCA-215ENST00000564475 PLEKHG1Q9ULL1 1385 aa16.94■□□□□ 0.3
FANCA-215ENST00000564475 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
FANCA-215ENST00000564475 IQGAP1P46940 1657 aa16.94■□□□□ 0.3
FANCA-215ENST00000564475 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
FANCA-215ENST00000564475 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
FANCA-215ENST00000564475 L3MBTL2Q969R5 705 aa16.93■□□□□ 0.3
FANCA-215ENST00000564475 NPHP4O75161 1426 aaPredicted RBP16.93■□□□□ 0.3
FANCA-215ENST00000564475 BCANQ96GW7 911 aa16.92■□□□□ 0.3
FANCA-215ENST00000564475 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
FANCA-215ENST00000564475 SETBP1Q9Y6X0 1596 aa16.9■□□□□ 0.3
FANCA-215ENST00000564475 NRXN1Q9ULB1 1477 aa16.9■□□□□ 0.3
FANCA-215ENST00000564475 DIP2AQ14689 1571 aa16.89■□□□□ 0.3
FANCA-215ENST00000564475 LAMC1P11047 1609 aa16.89■□□□□ 0.29
FANCA-215ENST00000564475 ADGRF5Q8IZF2 1346 aa16.89■□□□□ 0.29
FANCA-215ENST00000564475 PIK3C2GO75747 1445 aa16.88■□□□□ 0.29
FANCA-215ENST00000564475 NRXN3Q9Y4C0 1643 aa16.86■□□□□ 0.29
FANCA-215ENST00000564475 PRAG1Q86YV5 1406 aa16.86■□□□□ 0.29
FANCA-215ENST00000564475 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
FANCA-215ENST00000564475 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
FANCA-215ENST00000564475 ALKQ9UM73 1620 aa16.85■□□□□ 0.29
FANCA-215ENST00000564475 ADAMTS13Q76LX8 1427 aa16.84■□□□□ 0.29
FANCA-215ENST00000564475 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
FANCA-215ENST00000564475 SLC26A8Q96RN1 970 aa16.82■□□□□ 0.28
FANCA-215ENST00000564475 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
FANCA-215ENST00000564475 C14orf93Q9H972 538 aaKnown RBP16.82■□□□□ 0.28
FANCA-215ENST00000564475 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
FANCA-215ENST00000564475 TRPM1Q7Z4N2 1603 aa16.8■□□□□ 0.28
FANCA-215ENST00000564475 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
FANCA-215ENST00000564475 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
FANCA-215ENST00000564475 CHD2O14647 1828 aaKnown RBP16.79■□□□□ 0.28
FANCA-215ENST00000564475 METP08581 1390 aa16.77■□□□□ 0.27
FANCA-215ENST00000564475 RALGAPBQ86X10 1494 aa16.76■□□□□ 0.27
FANCA-215ENST00000564475 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
FANCA-215ENST00000564475 KCNA6P17658 529 aa16.75■□□□□ 0.27
FANCA-215ENST00000564475 ROCK2O75116 1388 aaKnown RBP16.75■□□□□ 0.27
FANCA-215ENST00000564475 ADGRB1O14514 1584 aa16.74■□□□□ 0.27
FANCA-215ENST00000564475 NWD1Q149M9 1564 aa16.74■□□□□ 0.27
FANCA-215ENST00000564475 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
FANCA-215ENST00000564475 ASXL1Q8IXJ9 1541 aa16.73■□□□□ 0.27
FANCA-215ENST00000564475 LRPPRCP42704 1394 aaKnown RBP16.73■□□□□ 0.27
FANCA-215ENST00000564475 XRN1Q8IZH2 1706 aaKnown RBP16.73■□□□□ 0.27
FANCA-215ENST00000564475 YTHDC2Q9H6S0 1430 aaKnown RBP16.72■□□□□ 0.27
FANCA-215ENST00000564475 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
FANCA-215ENST00000564475 AMOTL2Q9Y2J4 779 aa16.72■□□□□ 0.27
FANCA-215ENST00000564475 NKTRP30414 1462 aaKnown RBP16.72■□□□□ 0.27
FANCA-215ENST00000564475 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
FANCA-215ENST00000564475 ZNF335Q9H4Z2 1342 aaPredicted RBP16.7■□□□□ 0.26
FANCA-215ENST00000564475 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
FANCA-215ENST00000564475 CPS1P31327 1500 aa16.7■□□□□ 0.26
FANCA-215ENST00000564475 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
FANCA-215ENST00000564475 ABCC11Q96J66 1382 aa16.7■□□□□ 0.26
FANCA-215ENST00000564475 NBPF1Q3BBV0 1214 aa16.7■□□□□ 0.26
FANCA-215ENST00000564475 TECPR2O15040 1411 aa16.7■□□□□ 0.26
FANCA-215ENST00000564475 CARD11Q9BXL7 1154 aa16.69■□□□□ 0.26
FANCA-215ENST00000564475 STK26Q9P289 416 aa16.69■□□□□ 0.26
FANCA-215ENST00000564475 DLC1Q96QB1 1528 aa16.69■□□□□ 0.26
FANCA-215ENST00000564475 PTCH1Q13635 1447 aa16.69■□□□□ 0.26
FANCA-215ENST00000564475 EIF3AQ14152 1382 aaKnown RBP16.67■□□□□ 0.26
FANCA-215ENST00000564475 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
FANCA-215ENST00000564475 FAM135BQ49AJ0 1406 aa16.66■□□□□ 0.26
FANCA-215ENST00000564475 ARHGEF28Q8N1W1 1705 aaKnown RBP16.66■□□□□ 0.26
FANCA-215ENST00000564475 TRAK1Q9UPV9 953 aa16.66■□□□□ 0.26
FANCA-215ENST00000564475 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
FANCA-215ENST00000564475 LTBP4Q8N2S1 1624 aa16.65■□□□□ 0.26
FANCA-215ENST00000564475 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.25
FANCA-215ENST00000564475 NCOA3Q9Y6Q9 1424 aa16.63■□□□□ 0.25
FANCA-215ENST00000564475 POGKQ9P215 609 aa16.63■□□□□ 0.25
FANCA-215ENST00000564475 LRRC7Q96NW7 1537 aa16.62■□□□□ 0.25
FANCA-215ENST00000564475 PRAM1Q96QH2 718 aa16.61■□□□□ 0.25
FANCA-215ENST00000564475 TMEM94Q12767 1356 aa16.6■□□□□ 0.25
FANCA-215ENST00000564475 USP47Q96K76 1375 aa16.6■□□□□ 0.25
FANCA-215ENST00000564475 XIRP1Q702N8 1843 aaKnown RBP16.59■□□□□ 0.25
FANCA-215ENST00000564475 C14orf37Q86TY3 774 aa16.59■□□□□ 0.25
FANCA-215ENST00000564475 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
FANCA-215ENST00000564475 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
FANCA-215ENST00000564475 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
FANCA-215ENST00000564475 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.24
FANCA-215ENST00000564475 IQSEC2Q5JU85 1478 aa16.57■□□□□ 0.24
FANCA-215ENST00000564475 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.24
FANCA-215ENST00000564475 ADGRL3Q9HAR2 1447 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms