RNA–Protein interactions for RNA: ENST00000564475.5

FANCA-215, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2

Gene FANCA, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-215ENST00000564475 NISCHQ9Y2I1 1504 aa27.88■■■□□ 2.05
FANCA-215ENST00000564475 CCDC180Q9P1Z9 1646 aa24.71■■□□□ 1.55
FANCA-215ENST00000564475 ABCC9O60706 1549 aa23.74■■□□□ 1.39
FANCA-215ENST00000564475 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
FANCA-215ENST00000564475 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.29
FANCA-215ENST00000564475 NACADO15069 1562 aa23.13■■□□□ 1.29
FANCA-215ENST00000564475 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
FANCA-215ENST00000564475 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
FANCA-215ENST00000564475 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
FANCA-215ENST00000564475 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
FANCA-215ENST00000564475 SCRIBQ14160 1630 aa22.5■■□□□ 1.19
FANCA-215ENST00000564475 BICRAQ9NZM4 1560 aa22.29■■□□□ 1.16
FANCA-215ENST00000564475 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.152e-7■■■■□ 21.9
FANCA-215ENST00000564475 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
FANCA-215ENST00000564475 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
FANCA-215ENST00000564475 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.05
FANCA-215ENST00000564475 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
FANCA-215ENST00000564475 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
FANCA-215ENST00000564475 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
FANCA-215ENST00000564475 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
FANCA-215ENST00000564475 DNAJC5BQ9UF47 199 aa21.41■■□□□ 1.02
FANCA-215ENST00000564475 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
FANCA-215ENST00000564475 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
FANCA-215ENST00000564475 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
FANCA-215ENST00000564475 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
FANCA-215ENST00000564475 NCAPD3P42695 1498 aa21.3■■□□□ 1
FANCA-215ENST00000564475 WIZO95785 1651 aa21.28■■□□□ 1
FANCA-215ENST00000564475 HMGXB3Q12766 1538 aa21.25■□□□□ 0.99
FANCA-215ENST00000564475 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
FANCA-215ENST00000564475 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
FANCA-215ENST00000564475 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
FANCA-215ENST00000564475 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
FANCA-215ENST00000564475 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
FANCA-215ENST00000564475 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
FANCA-215ENST00000564475 CFTRP13569 1480 aa20.64■□□□□ 0.89
FANCA-215ENST00000564475 NESP48681 1621 aa20.64■□□□□ 0.89
FANCA-215ENST00000564475 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
FANCA-215ENST00000564475 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
FANCA-215ENST00000564475 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
FANCA-215ENST00000564475 KIF21AQ7Z4S6 1674 aa20.46■□□□□ 0.87
FANCA-215ENST00000564475 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
FANCA-215ENST00000564475 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
FANCA-215ENST00000564475 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
FANCA-215ENST00000564475 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
FANCA-215ENST00000564475 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
FANCA-215ENST00000564475 WDR62O43379 1518 aa20.23■□□□□ 0.83
FANCA-215ENST00000564475 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
FANCA-215ENST00000564475 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
FANCA-215ENST00000564475 CUX2O14529 1486 aa20.17■□□□□ 0.82
FANCA-215ENST00000564475 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
FANCA-215ENST00000564475 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
FANCA-215ENST00000564475 CUX1P39880 1505 aa20.12■□□□□ 0.81
FANCA-215ENST00000564475 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
FANCA-215ENST00000564475 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
FANCA-215ENST00000564475 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
FANCA-215ENST00000564475 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.8
FANCA-215ENST00000564475 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
FANCA-215ENST00000564475 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
FANCA-215ENST00000564475 SOGA1O94964 1423 aa19.95■□□□□ 0.78
FANCA-215ENST00000564475 TARBP1Q13395 1621 aaKnown RBP19.92■□□□□ 0.78
FANCA-215ENST00000564475 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
FANCA-215ENST00000564475 RAD54L2Q9Y4B4 1467 aa19.89■□□□□ 0.77
FANCA-215ENST00000564475 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
FANCA-215ENST00000564475 WDR97A6NE52 1622 aa19.86■□□□□ 0.77
FANCA-215ENST00000564475 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
FANCA-215ENST00000564475 ZNF608Q9ULD9 1512 aaPredicted RBP19.8■□□□□ 0.76
FANCA-215ENST00000564475 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
FANCA-215ENST00000564475 TDRD9Q8NDG6 1382 aaKnown RBP19.76■□□□□ 0.75
FANCA-215ENST00000564475 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
FANCA-215ENST00000564475 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.758e-7■■■■■ 28.7
FANCA-215ENST00000564475 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
FANCA-215ENST00000564475 KIF27Q86VH2 1401 aa19.72■□□□□ 0.75
FANCA-215ENST00000564475 PBRM1Q86U86 1689 aa19.7■□□□□ 0.74
FANCA-215ENST00000564475 GRIN2BQ13224 1484 aa19.69■□□□□ 0.74
FANCA-215ENST00000564475 ERICH3Q5RHP9 1530 aa19.65■□□□□ 0.74
FANCA-215ENST00000564475 MAGI1Q96QZ7 1491 aaPredicted RBP19.61■□□□□ 0.73
FANCA-215ENST00000564475 EEA1Q15075 1411 aa19.61■□□□□ 0.73
FANCA-215ENST00000564475 SNAPC4Q5SXM2 1469 aa19.6■□□□□ 0.73
FANCA-215ENST00000564475 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
FANCA-215ENST00000564475 CUL7Q14999 1698 aa19.56■□□□□ 0.72
FANCA-215ENST00000564475 IGF1RP08069 1367 aa19.56■□□□□ 0.72
FANCA-215ENST00000564475 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
FANCA-215ENST00000564475 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
FANCA-215ENST00000564475 SYNJ2O15056 1496 aa19.52■□□□□ 0.72
FANCA-215ENST00000564475 CHD1O14646 1710 aa19.49■□□□□ 0.71
FANCA-215ENST00000564475 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
FANCA-215ENST00000564475 CSRNP3Q8WYN3 585 aa19.48■□□□□ 0.71
FANCA-215ENST00000564475 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
FANCA-215ENST00000564475 FBLN2P98095 1184 aa19.46■□□□□ 0.71
FANCA-215ENST00000564475 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
FANCA-215ENST00000564475 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
FANCA-215ENST00000564475 RAPGEF2Q9Y4G8 1499 aa19.41■□□□□ 0.7
FANCA-215ENST00000564475 PRXQ9BXM0 1461 aa19.4■□□□□ 0.7
FANCA-215ENST00000564475 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
FANCA-215ENST00000564475 KIF21BO75037 1637 aa19.36■□□□□ 0.69
FANCA-215ENST00000564475 NUP160Q12769 1436 aa19.32■□□□□ 0.68
FANCA-215ENST00000564475 CEP170Q5SW79 1584 aa19.3■□□□□ 0.68
FANCA-215ENST00000564475 GOLGA3Q08378 1498 aa19.26■□□□□ 0.67
FANCA-215ENST00000564475 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
FANCA-215ENST00000564475 CTTNBP2Q8WZ74 1663 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms