RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 HRCP23327 699 aa30.16■■■□□ 2.42
CMTM3-206ENST00000563672 FOXD1Q16676 465 aa30.16■■■□□ 2.42
CMTM3-206ENST00000563672 MYO5BQ9ULV0 1848 aa30.15■■■□□ 2.42
CMTM3-206ENST00000563672 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.14■■■□□ 2.42
CMTM3-206ENST00000563672 CLTCL1P53675 1640 aa30.13■■■□□ 2.41
CMTM3-206ENST00000563672 PPP1R15AO75807 674 aaPredicted RBP30.1■■■□□ 2.41
CMTM3-206ENST00000563672 PLEKHG1Q9ULL1 1385 aa30.1■■■□□ 2.41
CMTM3-206ENST00000563672 IQSEC2Q5JU85 1478 aa30.09■■■□□ 2.41
CMTM3-206ENST00000563672 CPS1P31327 1500 aa30.07■■■□□ 2.4
CMTM3-206ENST00000563672 SLC26A8Q96RN1 970 aa30.07■■■□□ 2.4
CMTM3-206ENST00000563672 NUTM2DQ5VT03 806 aaPredicted RBP30.06■■■□□ 2.4
CMTM3-206ENST00000563672 ZNF326Q5BKZ1 582 aaKnown RBP30.05■■■□□ 2.4
CMTM3-206ENST00000563672 BCANQ96GW7 911 aa30.04■■■□□ 2.4
CMTM3-206ENST00000563672 CCDC144AA2RUR9 1427 aa30■■■□□ 2.39
CMTM3-206ENST00000563672 SENP3Q9H4L4 574 aaPredicted RBP29.99■■■□□ 2.39
CMTM3-206ENST00000563672 TBX22Q9Y458 520 aa29.99■■■□□ 2.39
CMTM3-206ENST00000563672 STRCP1A6NGW2 1772 aa29.98■■■□□ 2.39
CMTM3-206ENST00000563672 KIF1BO60333 1816 aa29.98■■■□□ 2.39
CMTM3-206ENST00000563672 KCNA6P17658 529 aa29.97■■■□□ 2.39
CMTM3-206ENST00000563672 ADAMTS13Q76LX8 1427 aa29.96■■■□□ 2.39
CMTM3-206ENST00000563672 NEXMIFQ5QGS0 1516 aa29.96■■■□□ 2.39
CMTM3-206ENST00000563672 RPGRIP1LQ68CZ1 1315 aa29.96■■■□□ 2.39
CMTM3-206ENST00000563672 LRRC7Q96NW7 1537 aa29.95■■■□□ 2.38
CMTM3-206ENST00000563672 SPATA31E1Q6ZUB1 1445 aa29.91■■■□□ 2.38
CMTM3-206ENST00000563672 ANKRD30BQ9BXX2 1392 aa29.9■■■□□ 2.38
CMTM3-206ENST00000563672 VGFO15240 615 aaPredicted RBP29.89■■■□□ 2.38
CMTM3-206ENST00000563672 DIP2AQ14689 1571 aa29.88■■■□□ 2.37
CMTM3-206ENST00000563672 SETBP1Q9Y6X0 1596 aa29.88■■■□□ 2.37
CMTM3-206ENST00000563672 PIK3R4Q99570 1358 aa29.87■■■□□ 2.37
CMTM3-206ENST00000563672 UBAP1LF5GYI3 381 aa29.86■■■□□ 2.37
CMTM3-206ENST00000563672 NWD1Q149M9 1564 aa29.86■■■□□ 2.37
CMTM3-206ENST00000563672 RGL3Q3MIN7 710 aa29.85■■■□□ 2.37
CMTM3-206ENST00000563672 NRXN3Q9Y4C0 1643 aa29.85■■■□□ 2.37
CMTM3-206ENST00000563672 TRIM26Q12899 539 aaPredicted RBP29.83■■■□□ 2.37
CMTM3-206ENST00000563672 NKTRP30414 1462 aaKnown RBP29.82■■■□□ 2.36
CMTM3-206ENST00000563672 CHD2O14647 1828 aaKnown RBP29.81■■■□□ 2.36
CMTM3-206ENST00000563672 PROSER2Q86WR7 435 aaPredicted RBP29.81■■■□□ 2.36
CMTM3-206ENST00000563672 TMEM94Q12767 1356 aa29.8■■■□□ 2.36
CMTM3-206ENST00000563672 TOM1O60784 492 aa29.79■■■□□ 2.36
CMTM3-206ENST00000563672 PPLO60437 1756 aa29.78■■■□□ 2.36
CMTM3-206ENST00000563672 PTPRUQ92729 1446 aa29.78■■■□□ 2.36
CMTM3-206ENST00000563672 METP08581 1390 aa29.77■■■□□ 2.36
CMTM3-206ENST00000563672 AMOTL2Q9Y2J4 779 aa29.76■■■□□ 2.35
CMTM3-206ENST00000563672 ADGRF5Q8IZF2 1346 aa29.75■■■□□ 2.35
CMTM3-206ENST00000563672 RBM33Q96EV2 1170 aaKnown RBP29.74■■■□□ 2.35
CMTM3-206ENST00000563672 XIRP1Q702N8 1843 aaKnown RBP29.73■■■□□ 2.35
CMTM3-206ENST00000563672 ALKQ9UM73 1620 aa29.72■■■□□ 2.35
CMTM3-206ENST00000563672 IFT172Q9UG01 1749 aa29.69■■■□□ 2.34
CMTM3-206ENST00000563672 NCOA3Q9Y6Q9 1424 aa29.69■■■□□ 2.34
CMTM3-206ENST00000563672 PIP4K2BP78356 416 aa29.67■■■□□ 2.34
CMTM3-206ENST00000563672 XRN1Q8IZH2 1706 aaKnown RBP29.65■■■□□ 2.34
CMTM3-206ENST00000563672 SETD1AO15047 1707 aaKnown RBP29.65■■■□□ 2.34
CMTM3-206ENST00000563672 PIK3C2GO75747 1445 aa29.63■■■□□ 2.33
CMTM3-206ENST00000563672 MSH6P52701 1360 aa29.63■■■□□ 2.33
CMTM3-206ENST00000563672 MYOM2P54296 1465 aa29.62■■■□□ 2.33
CMTM3-206ENST00000563672 NRXN1Q9ULB1 1477 aa29.62■■■□□ 2.33
CMTM3-206ENST00000563672 SCAF1Q9H7N4 1312 aaKnown RBP29.62■■■□□ 2.33
CMTM3-206ENST00000563672 PRAG1Q86YV5 1406 aa29.58■■■□□ 2.33
CMTM3-206ENST00000563672 C19orf44Q9H6X5 657 aa29.58■■■□□ 2.33
CMTM3-206ENST00000563672 DHX57Q6P158 1386 aaKnown RBP29.57■■■□□ 2.32
CMTM3-206ENST00000563672 STAC3Q96MF2 364 aa29.57■■■□□ 2.32
CMTM3-206ENST00000563672 C14orf93Q9H972 538 aaKnown RBP29.57■■■□□ 2.32
CMTM3-206ENST00000563672 C14orf37Q86TY3 774 aa29.56■■■□□ 2.32
CMTM3-206ENST00000563672 DCAF11Q8TEB1 546 aa29.56■■■□□ 2.32
CMTM3-206ENST00000563672 PTCH1Q13635 1447 aa29.54■■■□□ 2.32
CMTM3-206ENST00000563672 ROBO2Q9HCK4 1378 aa29.53■■■□□ 2.32
CMTM3-206ENST00000563672 KDM2AQ9Y2K7 1162 aa29.53■■■□□ 2.32
CMTM3-206ENST00000563672 CFAP70Q5T0N1 1121 aa29.52■■■□□ 2.32
CMTM3-206ENST00000563672 TMEM132EQ6IEE7 984 aa29.52■■■□□ 2.32
CMTM3-206ENST00000563672 FAM135BQ49AJ0 1406 aa29.52■■■□□ 2.32
CMTM3-206ENST00000563672 HSPA1LP34931 641 aa29.51■■■□□ 2.31
CMTM3-206ENST00000563672 SLAIN2Q9P270 581 aa29.51■■■□□ 2.31
CMTM3-206ENST00000563672 ASXL1Q8IXJ9 1541 aa29.5■■■□□ 2.31
CMTM3-206ENST00000563672 CADPS2Q86UW7 1296 aa29.5■■■□□ 2.31
CMTM3-206ENST00000563672 LRPPRCP42704 1394 aaKnown RBP29.5■■■□□ 2.31
CMTM3-206ENST00000563672 ATF3P18847 181 aa29.48■■■□□ 2.31
CMTM3-206ENST00000563672 ABCC11Q96J66 1382 aa29.48■■■□□ 2.31
CMTM3-206ENST00000563672 TECPR2O15040 1411 aa29.47■■■□□ 2.31
CMTM3-206ENST00000563672 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.47■■■□□ 2.31
CMTM3-206ENST00000563672 DCCP43146 1447 aa29.46■■■□□ 2.31
CMTM3-206ENST00000563672 STK26Q9P289 416 aa29.46■■■□□ 2.31
CMTM3-206ENST00000563672 ADGRL3Q9HAR2 1447 aa29.45■■■□□ 2.31
CMTM3-206ENST00000563672 SIN3AQ96ST3 1273 aa29.45■■■□□ 2.31
CMTM3-206ENST00000563672 YTHDC2Q9H6S0 1430 aaKnown RBP29.45■■■□□ 2.3
CMTM3-206ENST00000563672 LAMC1P11047 1609 aa29.43■■■□□ 2.3
CMTM3-206ENST00000563672 SIRT1Q96EB6 747 aa29.4■■■□□ 2.3
CMTM3-206ENST00000563672 WAPLQ7Z5K2 1190 aa29.39■■■□□ 2.3
CMTM3-206ENST00000563672 NEUROD1Q13562 356 aa29.37■■■□□ 2.29
CMTM3-206ENST00000563672 L3MBTL2Q969R5 705 aa29.37■■■□□ 2.29
CMTM3-206ENST00000563672 ADGRB1O14514 1584 aa29.37■■■□□ 2.29
CMTM3-206ENST00000563672 ROBO1Q9Y6N7 1651 aa29.37■■■□□ 2.29
CMTM3-206ENST00000563672 NALCNQ8IZF0 1738 aa29.37■■■□□ 2.29
CMTM3-206ENST00000563672 KNDC1Q76NI1 1749 aa29.36■■■□□ 2.29
CMTM3-206ENST00000563672 MST1RQ04912 1400 aa29.35■■■□□ 2.29
CMTM3-206ENST00000563672 PLEKHH1Q9ULM0 1364 aa29.34■■■□□ 2.29
CMTM3-206ENST00000563672 PCGF6Q9BYE7 350 aa29.33■■■□□ 2.29
CMTM3-206ENST00000563672 BRINP3Q76B58 766 aa29.3■■■□□ 2.28
CMTM3-206ENST00000563672 DLC1Q96QB1 1528 aa29.28■■■□□ 2.28
CMTM3-206ENST00000563672 PRAM1Q96QH2 718 aa29.27■■■□□ 2.28
CMTM3-206ENST00000563672 C1orf167Q5SNV9 1468 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms