RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 EID1Q9Y6B2 187 aa22.36■■□□□ 1.17
EDC3-206ENST00000563009 SPATA31E1Q6ZUB1 1445 aa22.36■■□□□ 1.17
EDC3-206ENST00000563009 RIMS2Q9UQ26 1411 aa22.36■■□□□ 1.17
EDC3-206ENST00000563009 NPHP4O75161 1426 aaPredicted RBP22.33■■□□□ 1.17
EDC3-206ENST00000563009 IQGAP1P46940 1657 aa22.33■■□□□ 1.16
EDC3-206ENST00000563009 NEXMIFQ5QGS0 1516 aa22.32■■□□□ 1.16
EDC3-206ENST00000563009 HDGFP51858 240 aaKnown RBP22.32■■□□□ 1.16
EDC3-206ENST00000563009 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.31■■□□□ 1.16
EDC3-206ENST00000563009 ZNF326Q5BKZ1 582 aaKnown RBP22.3■■□□□ 1.16
EDC3-206ENST00000563009 RPGRIP1LQ68CZ1 1315 aa22.3■■□□□ 1.16
EDC3-206ENST00000563009 PPLO60437 1756 aa22.27■■□□□ 1.16
EDC3-206ENST00000563009 PLEKHG1Q9ULL1 1385 aa22.27■■□□□ 1.16
EDC3-206ENST00000563009 IFT172Q9UG01 1749 aa22.26■■□□□ 1.15
EDC3-206ENST00000563009 PPP1R15AO75807 674 aaPredicted RBP22.25■■□□□ 1.15
EDC3-206ENST00000563009 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
EDC3-206ENST00000563009 NUTM2DQ5VT03 806 aaPredicted RBP22.24■■□□□ 1.15
EDC3-206ENST00000563009 SETBP1Q9Y6X0 1596 aa22.21■■□□□ 1.15
EDC3-206ENST00000563009 VGFO15240 615 aaPredicted RBP22.21■■□□□ 1.15
EDC3-206ENST00000563009 NRXN3Q9Y4C0 1643 aa22.2■■□□□ 1.14
EDC3-206ENST00000563009 ILDR1Q86SU0 546 aaPredicted RBP22.19■■□□□ 1.14
EDC3-206ENST00000563009 ADAMTS13Q76LX8 1427 aa22.19■■□□□ 1.14
EDC3-206ENST00000563009 DIP2AQ14689 1571 aa22.18■■□□□ 1.14
EDC3-206ENST00000563009 MYOM2P54296 1465 aa22.17■■□□□ 1.14
EDC3-206ENST00000563009 SIN3AQ96ST3 1273 aa22.17■■□□□ 1.14
EDC3-206ENST00000563009 SLC26A8Q96RN1 970 aa22.16■■□□□ 1.14
EDC3-206ENST00000563009 BCANQ96GW7 911 aa22.15■■□□□ 1.14
EDC3-206ENST00000563009 TBX22Q9Y458 520 aa22.15■■□□□ 1.14
EDC3-206ENST00000563009 NRXN1Q9ULB1 1477 aa22.15■■□□□ 1.14
EDC3-206ENST00000563009 LTBP4Q8N2S1 1624 aa22.14■■□□□ 1.14
EDC3-206ENST00000563009 ADGRF5Q8IZF2 1346 aa22.14■■□□□ 1.14
EDC3-206ENST00000563009 ZNF335Q9H4Z2 1342 aaPredicted RBP22.14■■□□□ 1.14
EDC3-206ENST00000563009 STAC3Q96MF2 364 aa22.12■■□□□ 1.13
EDC3-206ENST00000563009 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
EDC3-206ENST00000563009 PIK3C2GO75747 1445 aa22.12■■□□□ 1.13
EDC3-206ENST00000563009 CLSPNQ9HAW4 1339 aa22.11■■□□□ 1.13
EDC3-206ENST00000563009 SETD1AO15047 1707 aaKnown RBP22.11■■□□□ 1.13
EDC3-206ENST00000563009 STRCP1A6NGW2 1772 aa22.1■■□□□ 1.13
EDC3-206ENST00000563009 DCAF11Q8TEB1 546 aa22.1■■□□□ 1.13
EDC3-206ENST00000563009 PIK3R4Q99570 1358 aa22.1■■□□□ 1.13
EDC3-206ENST00000563009 ALKQ9UM73 1620 aa22.09■■□□□ 1.13
EDC3-206ENST00000563009 NWD1Q149M9 1564 aa22.09■■□□□ 1.13
EDC3-206ENST00000563009 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
EDC3-206ENST00000563009 CHD2O14647 1828 aaKnown RBP22.08■■□□□ 1.13
EDC3-206ENST00000563009 CPS1P31327 1500 aa22.08■■□□□ 1.13
EDC3-206ENST00000563009 KCNA6P17658 529 aa22.06■■□□□ 1.12
EDC3-206ENST00000563009 METP08581 1390 aa22.06■■□□□ 1.12
EDC3-206ENST00000563009 L3MBTL2Q969R5 705 aa22.05■■□□□ 1.12
EDC3-206ENST00000563009 LAMC1P11047 1609 aa22.05■■□□□ 1.12
EDC3-206ENST00000563009 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
EDC3-206ENST00000563009 PTPRUQ92729 1446 aa22.03■■□□□ 1.12
EDC3-206ENST00000563009 NKTRP30414 1462 aaKnown RBP22.03■■□□□ 1.12
EDC3-206ENST00000563009 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
EDC3-206ENST00000563009 C14orf93Q9H972 538 aaKnown RBP22.02■■□□□ 1.12
EDC3-206ENST00000563009 XRN1Q8IZH2 1706 aaKnown RBP22.02■■□□□ 1.12
EDC3-206ENST00000563009 PRAG1Q86YV5 1406 aa22■■□□□ 1.11
EDC3-206ENST00000563009 ASXL1Q8IXJ9 1541 aa22■■□□□ 1.11
EDC3-206ENST00000563009 LRRC7Q96NW7 1537 aa22■■□□□ 1.11
EDC3-206ENST00000563009 TONSLQ96HA7 1378 aa21.99■■□□□ 1.11
EDC3-206ENST00000563009 CERKQ8TCT0 537 aa21.99■■□□□ 1.11
EDC3-206ENST00000563009 IQSEC2Q5JU85 1478 aa21.98■■□□□ 1.11
EDC3-206ENST00000563009 CFAP70Q5T0N1 1121 aa21.98■■□□□ 1.11
EDC3-206ENST00000563009 AMOTL2Q9Y2J4 779 aa21.98■■□□□ 1.11
EDC3-206ENST00000563009 KIAA1210Q9ULL0 1709 aa21.96■■□□□ 1.11
EDC3-206ENST00000563009 ADGRB1O14514 1584 aa21.95■■□□□ 1.1
EDC3-206ENST00000563009 XIRP1Q702N8 1843 aaKnown RBP21.94■■□□□ 1.1
EDC3-206ENST00000563009 TECPR2O15040 1411 aa21.93■■□□□ 1.1
EDC3-206ENST00000563009 LRPPRCP42704 1394 aaKnown RBP21.93■■□□□ 1.1
EDC3-206ENST00000563009 PTCH1Q13635 1447 aa21.93■■□□□ 1.1
EDC3-206ENST00000563009 TMEM132EQ6IEE7 984 aa21.93■■□□□ 1.1
EDC3-206ENST00000563009 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
EDC3-206ENST00000563009 KNDC1Q76NI1 1749 aa21.92■■□□□ 1.1
EDC3-206ENST00000563009 YTHDC2Q9H6S0 1430 aaKnown RBP21.91■■□□□ 1.1
EDC3-206ENST00000563009 TMEM94Q12767 1356 aa21.91■■□□□ 1.1
EDC3-206ENST00000563009 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
EDC3-206ENST00000563009 PROSER2Q86WR7 435 aaPredicted RBP21.91■■□□□ 1.1
EDC3-206ENST00000563009 NCOA3Q9Y6Q9 1424 aa21.9■■□□□ 1.1
EDC3-206ENST00000563009 ROBO2Q9HCK4 1378 aa21.88■■□□□ 1.09
EDC3-206ENST00000563009 TRPM1Q7Z4N2 1603 aa21.88■■□□□ 1.09
EDC3-206ENST00000563009 NBPF8Q3BBV2 869 aa21.86■■□□□ 1.09
EDC3-206ENST00000563009 RBM33Q96EV2 1170 aaKnown RBP21.85■■□□□ 1.09
EDC3-206ENST00000563009 STK26Q9P289 416 aa21.85■■□□□ 1.09
EDC3-206ENST00000563009 DLC1Q96QB1 1528 aa21.85■■□□□ 1.09
EDC3-206ENST00000563009 FAM135BQ49AJ0 1406 aa21.84■■□□□ 1.09
EDC3-206ENST00000563009 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
EDC3-206ENST00000563009 SIRT1Q96EB6 747 aa21.84■■□□□ 1.09
EDC3-206ENST00000563009 RALGAPBQ86X10 1494 aa21.81■■□□□ 1.08
EDC3-206ENST00000563009 MSH6P52701 1360 aa21.8■■□□□ 1.08
EDC3-206ENST00000563009 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
EDC3-206ENST00000563009 ADGRL3Q9HAR2 1447 aa21.8■■□□□ 1.08
EDC3-206ENST00000563009 GPRASP1Q5JY77 1395 aa21.79■■□□□ 1.08
EDC3-206ENST00000563009 ARHGEF28Q8N1W1 1705 aaKnown RBP21.78■■□□□ 1.08
EDC3-206ENST00000563009 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.78■■□□□ 1.08
EDC3-206ENST00000563009 ROCK2O75116 1388 aaKnown RBP21.78■■□□□ 1.08
EDC3-206ENST00000563009 PLEKHH1Q9ULM0 1364 aa21.78■■□□□ 1.08
EDC3-206ENST00000563009 C19orf44Q9H6X5 657 aa21.78■■□□□ 1.08
EDC3-206ENST00000563009 TRAK1Q9UPV9 953 aa21.78■■□□□ 1.08
EDC3-206ENST00000563009 WAPLQ7Z5K2 1190 aa21.77■■□□□ 1.08
EDC3-206ENST00000563009 DCCP43146 1447 aa21.77■■□□□ 1.08
EDC3-206ENST00000563009 C14orf37Q86TY3 774 aa21.76■■□□□ 1.07
EDC3-206ENST00000563009 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms