RNA–Protein interactions for RNA: ENST00000562659.1

GSE1-212, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-212ENST00000562659 ARHGAP23Q9P227 1491 aa18.93■□□□□ 0.62
GSE1-212ENST00000562659 HOXD11P31277 338 aaPredicted RBP18.93■□□□□ 0.62
GSE1-212ENST00000562659 SLIT1O75093 1534 aa18.92■□□□□ 0.62
GSE1-212ENST00000562659 CHGAP10645 457 aaKnown RBP18.92■□□□□ 0.62
GSE1-212ENST00000562659 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
GSE1-212ENST00000562659 CFAP65Q6ZU64 1925 aaKnown RBP18.91■□□□□ 0.62
GSE1-212ENST00000562659 ANKLE2Q86XL3 938 aa18.9■□□□□ 0.62
GSE1-212ENST00000562659 TIMELESSQ9UNS1 1208 aa18.9■□□□□ 0.62
GSE1-212ENST00000562659 EID1Q9Y6B2 187 aa18.9■□□□□ 0.62
GSE1-212ENST00000562659 UBR1Q8IWV7 1749 aa18.89■□□□□ 0.61
GSE1-212ENST00000562659 SIN3AQ96ST3 1273 aa18.89■□□□□ 0.61
GSE1-212ENST00000562659 ZFYVE9O95405 1425 aa18.89■□□□□ 0.61
GSE1-212ENST00000562659 ZNF326Q5BKZ1 582 aaKnown RBP18.88■□□□□ 0.61
GSE1-212ENST00000562659 VGFO15240 615 aaPredicted RBP18.87■□□□□ 0.61
GSE1-212ENST00000562659 RIMS2Q9UQ26 1411 aa18.87■□□□□ 0.61
GSE1-212ENST00000562659 HSPA2P54652 639 aa18.86■□□□□ 0.61
GSE1-212ENST00000562659 RGL3Q3MIN7 710 aa18.86■□□□□ 0.61
GSE1-212ENST00000562659 TXNDC2Q86VQ3 553 aa18.86■□□□□ 0.61
GSE1-212ENST00000562659 LTKP29376 864 aa18.85■□□□□ 0.61
GSE1-212ENST00000562659 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
GSE1-212ENST00000562659 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
GSE1-212ENST00000562659 KIF1BO60333 1816 aa18.83■□□□□ 0.6
GSE1-212ENST00000562659 MED14O60244 1454 aa18.83■□□□□ 0.6
GSE1-212ENST00000562659 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
GSE1-212ENST00000562659 NEXMIFQ5QGS0 1516 aa18.81■□□□□ 0.6
GSE1-212ENST00000562659 MYOM2P54296 1465 aa18.8■□□□□ 0.6
GSE1-212ENST00000562659 PPP1R15AO75807 674 aaPredicted RBP18.8■□□□□ 0.6
GSE1-212ENST00000562659 L3MBTL2Q969R5 705 aa18.8■□□□□ 0.6
GSE1-212ENST00000562659 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
GSE1-212ENST00000562659 DCAF11Q8TEB1 546 aa18.79■□□□□ 0.6
GSE1-212ENST00000562659 NCKAP5LQ9HCH0 1330 aa18.78■□□□□ 0.6
GSE1-212ENST00000562659 NRXN1Q9ULB1 1477 aa18.77■□□□□ 0.6
GSE1-212ENST00000562659 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
GSE1-212ENST00000562659 NPHP4O75161 1426 aaPredicted RBP18.76■□□□□ 0.59
GSE1-212ENST00000562659 TBX22Q9Y458 520 aa18.75■□□□□ 0.59
GSE1-212ENST00000562659 ADGRF5Q8IZF2 1346 aa18.74■□□□□ 0.59
GSE1-212ENST00000562659 CNKSR2Q8WXI2 1034 aa18.74■□□□□ 0.59
GSE1-212ENST00000562659 PIK3C2GO75747 1445 aa18.74■□□□□ 0.59
GSE1-212ENST00000562659 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
GSE1-212ENST00000562659 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
GSE1-212ENST00000562659 MYO5BQ9ULV0 1848 aa18.72■□□□□ 0.59
GSE1-212ENST00000562659 SETBP1Q9Y6X0 1596 aa18.72■□□□□ 0.59
GSE1-212ENST00000562659 C14orf93Q9H972 538 aaKnown RBP18.71■□□□□ 0.59
GSE1-212ENST00000562659 PPLO60437 1756 aa18.7■□□□□ 0.58
GSE1-212ENST00000562659 PIK3R4Q99570 1358 aa18.7■□□□□ 0.58
GSE1-212ENST00000562659 ADAMTS13Q76LX8 1427 aa18.7■□□□□ 0.58
GSE1-212ENST00000562659 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
GSE1-212ENST00000562659 PRAG1Q86YV5 1406 aa18.69■□□□□ 0.58
GSE1-212ENST00000562659 STRCQ7RTU9 1775 aa18.68■□□□□ 0.58
GSE1-212ENST00000562659 BCANQ96GW7 911 aa18.68■□□□□ 0.58
GSE1-212ENST00000562659 DIP2AQ14689 1571 aa18.68■□□□□ 0.58
GSE1-212ENST00000562659 POLR1AO95602 1720 aaPredicted RBP18.67■□□□□ 0.58
GSE1-212ENST00000562659 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
GSE1-212ENST00000562659 SLC26A8Q96RN1 970 aa18.65■□□□□ 0.58
GSE1-212ENST00000562659 IQGAP1P46940 1657 aa18.65■□□□□ 0.58
GSE1-212ENST00000562659 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
GSE1-212ENST00000562659 ALKQ9UM73 1620 aa18.63■□□□□ 0.57
GSE1-212ENST00000562659 NBPF8Q3BBV2 869 aa18.62■□□□□ 0.57
GSE1-212ENST00000562659 NRXN3Q9Y4C0 1643 aa18.62■□□□□ 0.57
GSE1-212ENST00000562659 METP08581 1390 aa18.61■□□□□ 0.57
GSE1-212ENST00000562659 KCNA6P17658 529 aa18.61■□□□□ 0.57
GSE1-212ENST00000562659 ZEB1P37275 1124 aaPredicted RBP18.6■□□□□ 0.57
GSE1-212ENST00000562659 LAMC1P11047 1609 aa18.6■□□□□ 0.57
GSE1-212ENST00000562659 SIRT1Q96EB6 747 aa18.59■□□□□ 0.57
GSE1-212ENST00000562659 GPRASP1Q5JY77 1395 aa18.58■□□□□ 0.57
GSE1-212ENST00000562659 LRPPRCP42704 1394 aaKnown RBP18.57■□□□□ 0.56
GSE1-212ENST00000562659 ABCC11Q96J66 1382 aa18.57■□□□□ 0.56
GSE1-212ENST00000562659 KIAA1210Q9ULL0 1709 aa18.57■□□□□ 0.56
GSE1-212ENST00000562659 ADGRB1O14514 1584 aa18.56■□□□□ 0.56
GSE1-212ENST00000562659 RALGAPBQ86X10 1494 aa18.56■□□□□ 0.56
GSE1-212ENST00000562659 TECPR2O15040 1411 aa18.56■□□□□ 0.56
GSE1-212ENST00000562659 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
GSE1-212ENST00000562659 AMOTL2Q9Y2J4 779 aa18.55■□□□□ 0.56
GSE1-212ENST00000562659 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
GSE1-212ENST00000562659 ROCK2O75116 1388 aaKnown RBP18.55■□□□□ 0.56
GSE1-212ENST00000562659 TMEM132EQ6IEE7 984 aa18.54■□□□□ 0.56
GSE1-212ENST00000562659 YTHDC2Q9H6S0 1430 aaKnown RBP18.54■□□□□ 0.56
GSE1-212ENST00000562659 NKTRP30414 1462 aaKnown RBP18.53■□□□□ 0.56
GSE1-212ENST00000562659 SETD1AO15047 1707 aaKnown RBP18.53■□□□□ 0.56
GSE1-212ENST00000562659 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
GSE1-212ENST00000562659 NWD1Q149M9 1564 aa18.52■□□□□ 0.56
GSE1-212ENST00000562659 PTCH1Q13635 1447 aa18.52■□□□□ 0.56
GSE1-212ENST00000562659 ASXL1Q8IXJ9 1541 aa18.52■□□□□ 0.56
GSE1-212ENST00000562659 FAM135BQ49AJ0 1406 aa18.51■□□□□ 0.55
GSE1-212ENST00000562659 NCOA3Q9Y6Q9 1424 aa18.51■□□□□ 0.55
GSE1-212ENST00000562659 CPS1P31327 1500 aa18.5■□□□□ 0.55
GSE1-212ENST00000562659 TRPM1Q7Z4N2 1603 aa18.5■□□□□ 0.55
GSE1-212ENST00000562659 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
GSE1-212ENST00000562659 CARD11Q9BXL7 1154 aa18.49■□□□□ 0.55
GSE1-212ENST00000562659 XRN1Q8IZH2 1706 aaKnown RBP18.47■□□□□ 0.55
GSE1-212ENST00000562659 STK26Q9P289 416 aa18.47■□□□□ 0.55
GSE1-212ENST00000562659 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.55
GSE1-212ENST00000562659 C1QBPQ07021 282 aaKnown RBP18.46■□□□□ 0.55
GSE1-212ENST00000562659 PROSER2Q86WR7 435 aaPredicted RBP18.46■□□□□ 0.55
GSE1-212ENST00000562659 CHD2O14647 1828 aaKnown RBP18.46■□□□□ 0.55
GSE1-212ENST00000562659 LTBP4Q8N2S1 1624 aa18.45■□□□□ 0.54
GSE1-212ENST00000562659 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
GSE1-212ENST00000562659 TRAK1Q9UPV9 953 aa18.45■□□□□ 0.54
GSE1-212ENST00000562659 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
GSE1-212ENST00000562659 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms