RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 KIF1BO60333 1816 aa23.82■■□□□ 1.4
USB1-206ENST00000562534 STRCQ7RTU9 1775 aa23.81■■□□□ 1.4
USB1-206ENST00000562534 VGFO15240 615 aaPredicted RBP23.81■■□□□ 1.4
USB1-206ENST00000562534 SCAF11Q99590 1463 aaKnown RBP23.81■■□□□ 1.4
USB1-206ENST00000562534 ZFYVE9O95405 1425 aa23.79■■□□□ 1.4
USB1-206ENST00000562534 MED14O60244 1454 aa23.79■■□□□ 1.4
USB1-206ENST00000562534 SPATA31E1Q6ZUB1 1445 aa23.78■■□□□ 1.4
USB1-206ENST00000562534 BCANQ96GW7 911 aa23.78■■□□□ 1.4
USB1-206ENST00000562534 NPHP4O75161 1426 aaPredicted RBP23.77■■□□□ 1.4
USB1-206ENST00000562534 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
USB1-206ENST00000562534 MYO5BQ9ULV0 1848 aa23.77■■□□□ 1.4
USB1-206ENST00000562534 NEURL4Q96JN8 1562 aa23.76■■□□□ 1.39
USB1-206ENST00000562534 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
USB1-206ENST00000562534 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
USB1-206ENST00000562534 PLEKHG1Q9ULL1 1385 aa23.73■■□□□ 1.39
USB1-206ENST00000562534 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
USB1-206ENST00000562534 POLR1AO95602 1720 aaPredicted RBP23.72■■□□□ 1.39
USB1-206ENST00000562534 TBX22Q9Y458 520 aa23.7■■□□□ 1.38
USB1-206ENST00000562534 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
USB1-206ENST00000562534 SLC26A8Q96RN1 970 aa23.69■■□□□ 1.38
USB1-206ENST00000562534 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
USB1-206ENST00000562534 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
USB1-206ENST00000562534 CCER1Q8TC90 406 aaPredicted RBP23.67■■□□□ 1.38
USB1-206ENST00000562534 IQGAP1P46940 1657 aa23.65■■□□□ 1.38
USB1-206ENST00000562534 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
USB1-206ENST00000562534 KDM2AQ9Y2K7 1162 aa23.65■■□□□ 1.38
USB1-206ENST00000562534 ADGRF5Q8IZF2 1346 aa23.63■■□□□ 1.37
USB1-206ENST00000562534 PPLO60437 1756 aa23.6■■□□□ 1.37
USB1-206ENST00000562534 L3MBTL2Q969R5 705 aa23.6■■□□□ 1.37
USB1-206ENST00000562534 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
USB1-206ENST00000562534 ZNF335Q9H4Z2 1342 aaPredicted RBP23.59■■□□□ 1.37
USB1-206ENST00000562534 KCNA6P17658 529 aa23.58■■□□□ 1.37
USB1-206ENST00000562534 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
USB1-206ENST00000562534 PIK3R4Q99570 1358 aa23.56■■□□□ 1.36
USB1-206ENST00000562534 C14orf93Q9H972 538 aaKnown RBP23.56■■□□□ 1.36
USB1-206ENST00000562534 MYOM2P54296 1465 aa23.56■■□□□ 1.36
USB1-206ENST00000562534 TIMELESSQ9UNS1 1208 aa23.55■■□□□ 1.36
USB1-206ENST00000562534 TONSLQ96HA7 1378 aa23.53■■□□□ 1.36
USB1-206ENST00000562534 IFT172Q9UG01 1749 aa23.53■■□□□ 1.36
USB1-206ENST00000562534 DIP2AQ14689 1571 aa23.53■■□□□ 1.36
USB1-206ENST00000562534 PIK3C2GO75747 1445 aa23.52■■□□□ 1.36
USB1-206ENST00000562534 NRXN1Q9ULB1 1477 aa23.52■■□□□ 1.36
USB1-206ENST00000562534 CFAP70Q5T0N1 1121 aa23.51■■□□□ 1.35
USB1-206ENST00000562534 AMOTL2Q9Y2J4 779 aa23.51■■□□□ 1.35
USB1-206ENST00000562534 ALKQ9UM73 1620 aa23.5■■□□□ 1.35
USB1-206ENST00000562534 METP08581 1390 aa23.5■■□□□ 1.35
USB1-206ENST00000562534 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
USB1-206ENST00000562534 PROSER2Q86WR7 435 aaPredicted RBP23.47■■□□□ 1.35
USB1-206ENST00000562534 CERKQ8TCT0 537 aa23.47■■□□□ 1.35
USB1-206ENST00000562534 CPS1P31327 1500 aa23.46■■□□□ 1.35
USB1-206ENST00000562534 LTBP4Q8N2S1 1624 aa23.46■■□□□ 1.35
USB1-206ENST00000562534 TMEM132EQ6IEE7 984 aa23.45■■□□□ 1.34
USB1-206ENST00000562534 CHD2O14647 1828 aaKnown RBP23.43■■□□□ 1.34
USB1-206ENST00000562534 PTPRUQ92729 1446 aa23.42■■□□□ 1.34
USB1-206ENST00000562534 PRAG1Q86YV5 1406 aa23.42■■□□□ 1.34
USB1-206ENST00000562534 STK26Q9P289 416 aa23.4■■□□□ 1.34
USB1-206ENST00000562534 SIRT1Q96EB6 747 aa23.39■■□□□ 1.33
USB1-206ENST00000562534 ABCC11Q96J66 1382 aa23.39■■□□□ 1.33
USB1-206ENST00000562534 NKTRP30414 1462 aaKnown RBP23.38■■□□□ 1.33
USB1-206ENST00000562534 LRPPRCP42704 1394 aaKnown RBP23.38■■□□□ 1.33
USB1-206ENST00000562534 LAMC1P11047 1609 aa23.37■■□□□ 1.33
USB1-206ENST00000562534 NWD1Q149M9 1564 aa23.37■■□□□ 1.33
USB1-206ENST00000562534 LRRC7Q96NW7 1537 aa23.37■■□□□ 1.33
USB1-206ENST00000562534 STRCP1A6NGW2 1772 aa23.37■■□□□ 1.33
USB1-206ENST00000562534 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
USB1-206ENST00000562534 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
USB1-206ENST00000562534 NBPF8Q3BBV2 869 aa23.36■■□□□ 1.33
USB1-206ENST00000562534 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
USB1-206ENST00000562534 YTHDC2Q9H6S0 1430 aaKnown RBP23.35■■□□□ 1.33
USB1-206ENST00000562534 TMEM94Q12767 1356 aa23.35■■□□□ 1.33
USB1-206ENST00000562534 IQSEC2Q5JU85 1478 aa23.34■■□□□ 1.33
USB1-206ENST00000562534 RBM33Q96EV2 1170 aaKnown RBP23.33■■□□□ 1.33
USB1-206ENST00000562534 C14orf37Q86TY3 774 aa23.32■■□□□ 1.32
USB1-206ENST00000562534 C19orf44Q9H6X5 657 aa23.32■■□□□ 1.32
USB1-206ENST00000562534 TRAK1Q9UPV9 953 aa23.32■■□□□ 1.32
USB1-206ENST00000562534 KIAA1210Q9ULL0 1709 aa23.31■■□□□ 1.32
USB1-206ENST00000562534 ROBO2Q9HCK4 1378 aa23.3■■□□□ 1.32
USB1-206ENST00000562534 TECPR2O15040 1411 aa23.3■■□□□ 1.32
USB1-206ENST00000562534 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
USB1-206ENST00000562534 ADGRB1O14514 1584 aa23.29■■□□□ 1.32
USB1-206ENST00000562534 PTCH1Q13635 1447 aa23.29■■□□□ 1.32
USB1-206ENST00000562534 ASXL1Q8IXJ9 1541 aa23.28■■□□□ 1.32
USB1-206ENST00000562534 TOM1O60784 492 aa23.28■■□□□ 1.32
USB1-206ENST00000562534 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
USB1-206ENST00000562534 POGKQ9P215 609 aa23.28■■□□□ 1.32
USB1-206ENST00000562534 ROCK2O75116 1388 aaKnown RBP23.27■■□□□ 1.32
USB1-206ENST00000562534 FAM135BQ49AJ0 1406 aa23.27■■□□□ 1.32
USB1-206ENST00000562534 MSH6P52701 1360 aa23.27■■□□□ 1.31
USB1-206ENST00000562534 PRAM1Q96QH2 718 aa23.25■■□□□ 1.31
USB1-206ENST00000562534 ATF3P18847 181 aa23.24■■□□□ 1.31
USB1-206ENST00000562534 CARD11Q9BXL7 1154 aa23.24■■□□□ 1.31
USB1-206ENST00000562534 UBAP1LF5GYI3 381 aa23.23■■□□□ 1.31
USB1-206ENST00000562534 CADPS2Q86UW7 1296 aa23.23■■□□□ 1.31
USB1-206ENST00000562534 DLC1Q96QB1 1528 aa23.22■■□□□ 1.31
USB1-206ENST00000562534 TRPM1Q7Z4N2 1603 aa23.22■■□□□ 1.31
USB1-206ENST00000562534 GPRASP1Q5JY77 1395 aa23.21■■□□□ 1.31
USB1-206ENST00000562534 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
USB1-206ENST00000562534 SAFB2Q14151 953 aaKnown RBP eCLIP23.19■■□□□ 1.3
USB1-206ENST00000562534 FBXO41Q8TF61 875 aa23.19■■□□□ 1.3
USB1-206ENST00000562534 RALGAPBQ86X10 1494 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms