RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 RIMS2Q9UQ26 1411 aa14.95□□□□□ -0.02
HERC1-212ENST00000561348 SLIT1O75093 1534 aa14.94□□□□□ -0.02
HERC1-212ENST00000561348 TMEM131LA2VDJ0 1609 aa14.93□□□□□ -0.02
HERC1-212ENST00000561348 RGL3Q3MIN7 710 aa14.93□□□□□ -0.02
HERC1-212ENST00000561348 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.93□□□□□ -0.02
HERC1-212ENST00000561348 ARHGAP23Q9P227 1491 aa14.93□□□□□ -0.02
HERC1-212ENST00000561348 FBXO41Q8TF61 875 aa14.92□□□□□ -0.02
HERC1-212ENST00000561348 MED14O60244 1454 aa14.92□□□□□ -0.02
HERC1-212ENST00000561348 CLTCL1P53675 1640 aa14.92□□□□□ -0.02
HERC1-212ENST00000561348 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
HERC1-212ENST00000561348 KDM5AP29375 1690 aaKnown RBP14.91□□□□□ -0.02
HERC1-212ENST00000561348 LTBP4Q8N2S1 1624 aa14.9□□□□□ -0.02
HERC1-212ENST00000561348 TRPM2O94759 1503 aa14.9□□□□□ -0.02
HERC1-212ENST00000561348 ACIN1Q9UKV3 1341 aaKnown RBP14.9□□□□□ -0.02
HERC1-212ENST00000561348 KIF1BO60333 1816 aa14.89□□□□□ -0.03
HERC1-212ENST00000561348 CCDC144AA2RUR9 1427 aa14.89□□□□□ -0.03
HERC1-212ENST00000561348 UBAP1LF5GYI3 381 aa14.88□□□□□ -0.03
HERC1-212ENST00000561348 RBM33Q96EV2 1170 aaKnown RBP14.88□□□□□ -0.03
HERC1-212ENST00000561348 ZFYVE9O95405 1425 aa14.87□□□□□ -0.03
HERC1-212ENST00000561348 PIP4K2BP78356 416 aa14.86□□□□□ -0.03
HERC1-212ENST00000561348 PLEKHG1Q9ULL1 1385 aa14.85□□□□□ -0.03
HERC1-212ENST00000561348 PROSER2Q86WR7 435 aaPredicted RBP14.85□□□□□ -0.03
HERC1-212ENST00000561348 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
HERC1-212ENST00000561348 CPS1P31327 1500 aa14.83□□□□□ -0.04
HERC1-212ENST00000561348 C14orf37Q86TY3 774 aa14.83□□□□□ -0.04
HERC1-212ENST00000561348 KCNA6P17658 529 aa14.82□□□□□ -0.04
HERC1-212ENST00000561348 STRCP1A6NGW2 1772 aa14.82□□□□□ -0.04
HERC1-212ENST00000561348 VGFO15240 615 aaPredicted RBP14.81□□□□□ -0.04
HERC1-212ENST00000561348 HRCP23327 699 aa14.8□□□□□ -0.04
HERC1-212ENST00000561348 TBX22Q9Y458 520 aa14.8□□□□□ -0.04
HERC1-212ENST00000561348 TOM1O60784 492 aa14.79□□□□□ -0.04
HERC1-212ENST00000561348 NEXMIFQ5QGS0 1516 aa14.78□□□□□ -0.04
HERC1-212ENST00000561348 LRRC7Q96NW7 1537 aa14.78□□□□□ -0.04
HERC1-212ENST00000561348 RPGRIP1LQ68CZ1 1315 aa14.78□□□□□ -0.04
HERC1-212ENST00000561348 AMOTL2Q9Y2J4 779 aa14.78□□□□□ -0.04
HERC1-212ENST00000561348 KDM2AQ9Y2K7 1162 aa14.78□□□□□ -0.04
HERC1-212ENST00000561348 ADAMTS13Q76LX8 1427 aa14.77□□□□□ -0.04
HERC1-212ENST00000561348 TMEM94Q12767 1356 aa14.76□□□□□ -0.05
HERC1-212ENST00000561348 ADGRF5Q8IZF2 1346 aa14.75□□□□□ -0.05
HERC1-212ENST00000561348 IQSEC2Q5JU85 1478 aa14.75□□□□□ -0.05
HERC1-212ENST00000561348 ANKRD30BQ9BXX2 1392 aa14.74□□□□□ -0.05
HERC1-212ENST00000561348 MSH5O43196 834 aa14.74□□□□□ -0.05
HERC1-212ENST00000561348 STK26Q9P289 416 aa14.74□□□□□ -0.05
HERC1-212ENST00000561348 METP08581 1390 aa14.73□□□□□ -0.05
HERC1-212ENST00000561348 PPLO60437 1756 aa14.73□□□□□ -0.05
HERC1-212ENST00000561348 NEUROD1Q13562 356 aa14.73□□□□□ -0.05
HERC1-212ENST00000561348 DCAF11Q8TEB1 546 aa14.73□□□□□ -0.05
HERC1-212ENST00000561348 SPATA31E1Q6ZUB1 1445 aa14.73□□□□□ -0.05
HERC1-212ENST00000561348 CHD2O14647 1828 aaKnown RBP14.73□□□□□ -0.05
HERC1-212ENST00000561348 DIP2AQ14689 1571 aa14.72□□□□□ -0.05
HERC1-212ENST00000561348 NRXN3Q9Y4C0 1643 aa14.71□□□□□ -0.05
HERC1-212ENST00000561348 TMEM132EQ6IEE7 984 aa14.71□□□□□ -0.05
HERC1-212ENST00000561348 PCGF6Q9BYE7 350 aa14.71□□□□□ -0.05
HERC1-212ENST00000561348 SETBP1Q9Y6X0 1596 aa14.71□□□□□ -0.05
HERC1-212ENST00000561348 MSH6P52701 1360 aa14.71□□□□□ -0.06
HERC1-212ENST00000561348 PTPRUQ92729 1446 aa14.7□□□□□ -0.06
HERC1-212ENST00000561348 NKTRP30414 1462 aaKnown RBP14.69□□□□□ -0.06
HERC1-212ENST00000561348 PIK3R4Q99570 1358 aa14.69□□□□□ -0.06
HERC1-212ENST00000561348 ALKQ9UM73 1620 aa14.69□□□□□ -0.06
HERC1-212ENST00000561348 XIRP1Q702N8 1843 aaKnown RBP14.69□□□□□ -0.06
HERC1-212ENST00000561348 NWD1Q149M9 1564 aa14.68□□□□□ -0.06
HERC1-212ENST00000561348 ATF3P18847 181 aa14.68□□□□□ -0.06
HERC1-212ENST00000561348 SIN3AQ96ST3 1273 aa14.68□□□□□ -0.06
HERC1-212ENST00000561348 CFAP70Q5T0N1 1121 aa14.67□□□□□ -0.06
HERC1-212ENST00000561348 HSPA1LP34931 641 aa14.66□□□□□ -0.06
HERC1-212ENST00000561348 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
HERC1-212ENST00000561348 C19orf44Q9H6X5 657 aa14.64□□□□□ -0.07
HERC1-212ENST00000561348 SAFB2Q14151 953 aaKnown RBP eCLIP14.63□□□□□ -0.07
HERC1-212ENST00000561348 SLAIN2Q9P270 581 aa14.63□□□□□ -0.07
HERC1-212ENST00000561348 DHX57Q6P158 1386 aaKnown RBP14.61□□□□□ -0.07
HERC1-212ENST00000561348 ROBO2Q9HCK4 1378 aa14.61□□□□□ -0.07
HERC1-212ENST00000561348 XRN1Q8IZH2 1706 aaKnown RBP14.61□□□□□ -0.07
HERC1-212ENST00000561348 PIK3C2GO75747 1445 aa14.61□□□□□ -0.07
HERC1-212ENST00000561348 WAPLQ7Z5K2 1190 aa14.61□□□□□ -0.07
HERC1-212ENST00000561348 CADPS2Q86UW7 1296 aa14.61□□□□□ -0.07
HERC1-212ENST00000561348 C14orf93Q9H972 538 aaKnown RBP14.61□□□□□ -0.07
HERC1-212ENST00000561348 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
HERC1-212ENST00000561348 TRAK1Q9UPV9 953 aa14.6□□□□□ -0.07
HERC1-212ENST00000561348 SETD1AO15047 1707 aaKnown RBP14.6□□□□□ -0.07
HERC1-212ENST00000561348 MYOM2P54296 1465 aa14.59□□□□□ -0.07
HERC1-212ENST00000561348 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.59□□□□□ -0.07
HERC1-212ENST00000561348 POGKQ9P215 609 aa14.59□□□□□ -0.07
HERC1-212ENST00000561348 L3MBTL2Q969R5 705 aa14.58□□□□□ -0.08
HERC1-212ENST00000561348 YTHDC2Q9H6S0 1430 aaKnown RBP14.58□□□□□ -0.08
HERC1-212ENST00000561348 LRPPRCP42704 1394 aaKnown RBP14.57□□□□□ -0.08
HERC1-212ENST00000561348 NCOA3Q9Y6Q9 1424 aa14.57□□□□□ -0.08
HERC1-212ENST00000561348 ROBO1Q9Y6N7 1651 aa14.56□□□□□ -0.08
HERC1-212ENST00000561348 PRAM1Q96QH2 718 aa14.55□□□□□ -0.08
HERC1-212ENST00000561348 PLEKHH1Q9ULM0 1364 aa14.55□□□□□ -0.08
HERC1-212ENST00000561348 ADGRL3Q9HAR2 1447 aa14.55□□□□□ -0.08
HERC1-212ENST00000561348 ASXL1Q8IXJ9 1541 aa14.55□□□□□ -0.08
HERC1-212ENST00000561348 STAC3Q96MF2 364 aa14.54□□□□□ -0.08
HERC1-212ENST00000561348 PTCH1Q13635 1447 aa14.54□□□□□ -0.08
HERC1-212ENST00000561348 NRXN1Q9ULB1 1477 aa14.54□□□□□ -0.08
HERC1-212ENST00000561348 NALCNQ8IZF0 1738 aa14.54□□□□□ -0.08
HERC1-212ENST00000561348 LAMC1P11047 1609 aa14.53□□□□□ -0.08
HERC1-212ENST00000561348 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
HERC1-212ENST00000561348 ABCC11Q96J66 1382 aa14.53□□□□□ -0.08
HERC1-212ENST00000561348 HIRIP3Q9BW71 556 aaPredicted RBP14.53□□□□□ -0.08
HERC1-212ENST00000561348 TONSLQ96HA7 1378 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms