RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-218ENST00000560777 NPHP4O75161 1426 aaPredicted RBP17.55■□□□□ 0.4
RABGGTA-218ENST00000560777 NUTM2DQ5VT03 806 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-218ENST00000560777 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
RABGGTA-218ENST00000560777 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-218ENST00000560777 KIF1BO60333 1816 aa17.52■□□□□ 0.4
RABGGTA-218ENST00000560777 RGL3Q3MIN7 710 aa17.51■□□□□ 0.39
RABGGTA-218ENST00000560777 SPATA31E1Q6ZUB1 1445 aa17.5■□□□□ 0.39
RABGGTA-218ENST00000560777 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-218ENST00000560777 RPGRIP1LQ68CZ1 1315 aa17.49■□□□□ 0.39
RABGGTA-218ENST00000560777 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-218ENST00000560777 DHX57Q6P158 1386 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-218ENST00000560777 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
RABGGTA-218ENST00000560777 PLEKHG1Q9ULL1 1385 aa17.48■□□□□ 0.39
RABGGTA-218ENST00000560777 BCANQ96GW7 911 aa17.47■□□□□ 0.39
RABGGTA-218ENST00000560777 SLC26A8Q96RN1 970 aa17.47■□□□□ 0.39
RABGGTA-218ENST00000560777 ZNF335Q9H4Z2 1342 aaPredicted RBP17.47■□□□□ 0.39
RABGGTA-218ENST00000560777 NEXMIFQ5QGS0 1516 aa17.46■□□□□ 0.39
RABGGTA-218ENST00000560777 VGFO15240 615 aaPredicted RBP17.45■□□□□ 0.38
RABGGTA-218ENST00000560777 TBX22Q9Y458 520 aa17.43■□□□□ 0.38
RABGGTA-218ENST00000560777 SIN3AQ96ST3 1273 aa17.42■□□□□ 0.38
RABGGTA-218ENST00000560777 ADAMTS13Q76LX8 1427 aa17.41■□□□□ 0.38
RABGGTA-218ENST00000560777 LTBP4Q8N2S1 1624 aa17.4■□□□□ 0.38
RABGGTA-218ENST00000560777 ADGRF5Q8IZF2 1346 aa17.4■□□□□ 0.38
RABGGTA-218ENST00000560777 PPLO60437 1756 aa17.39■□□□□ 0.37
RABGGTA-218ENST00000560777 CERKQ8TCT0 537 aa17.38■□□□□ 0.37
RABGGTA-218ENST00000560777 KCNA6P17658 529 aa17.37■□□□□ 0.37
RABGGTA-218ENST00000560777 NEUROD1Q13562 356 aa17.37■□□□□ 0.37
RABGGTA-218ENST00000560777 DCAF11Q8TEB1 546 aa17.37■□□□□ 0.37
RABGGTA-218ENST00000560777 SETBP1Q9Y6X0 1596 aa17.36■□□□□ 0.37
RABGGTA-218ENST00000560777 NRXN3Q9Y4C0 1643 aa17.36■□□□□ 0.37
RABGGTA-218ENST00000560777 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
RABGGTA-218ENST00000560777 KDM2AQ9Y2K7 1162 aa17.35■□□□□ 0.37
RABGGTA-218ENST00000560777 STRCP1A6NGW2 1772 aa17.34■□□□□ 0.37
RABGGTA-218ENST00000560777 METP08581 1390 aa17.34■□□□□ 0.37
RABGGTA-218ENST00000560777 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
RABGGTA-218ENST00000560777 DIP2AQ14689 1571 aa17.32■□□□□ 0.36
RABGGTA-218ENST00000560777 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
RABGGTA-218ENST00000560777 CPS1P31327 1500 aa17.31■□□□□ 0.36
RABGGTA-218ENST00000560777 MYOM2P54296 1465 aa17.31■□□□□ 0.36
RABGGTA-218ENST00000560777 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
RABGGTA-218ENST00000560777 L3MBTL2Q969R5 705 aa17.31■□□□□ 0.36
RABGGTA-218ENST00000560777 AMOTL2Q9Y2J4 779 aa17.31■□□□□ 0.36
RABGGTA-218ENST00000560777 ALKQ9UM73 1620 aa17.31■□□□□ 0.36
RABGGTA-218ENST00000560777 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
RABGGTA-218ENST00000560777 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
RABGGTA-218ENST00000560777 C14orf93Q9H972 538 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-218ENST00000560777 CHD2O14647 1828 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-218ENST00000560777 CFAP70Q5T0N1 1121 aa17.29■□□□□ 0.36
RABGGTA-218ENST00000560777 LRRC7Q96NW7 1537 aa17.28■□□□□ 0.36
RABGGTA-218ENST00000560777 PROSER2Q86WR7 435 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-218ENST00000560777 RBM33Q96EV2 1170 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-218ENST00000560777 NWD1Q149M9 1564 aa17.27■□□□□ 0.35
RABGGTA-218ENST00000560777 SETD1AO15047 1707 aaKnown RBP17.27■□□□□ 0.35
RABGGTA-218ENST00000560777 TMEM132EQ6IEE7 984 aa17.26■□□□□ 0.35
RABGGTA-218ENST00000560777 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
RABGGTA-218ENST00000560777 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-218ENST00000560777 TMEM94Q12767 1356 aa17.24■□□□□ 0.35
RABGGTA-218ENST00000560777 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-218ENST00000560777 CLSPNQ9HAW4 1339 aa17.23■□□□□ 0.35
RABGGTA-218ENST00000560777 STK26Q9P289 416 aa17.21■□□□□ 0.35
RABGGTA-218ENST00000560777 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-218ENST00000560777 XIRP1Q702N8 1843 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-218ENST00000560777 ASXL1Q8IXJ9 1541 aa17.2■□□□□ 0.34
RABGGTA-218ENST00000560777 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
RABGGTA-218ENST00000560777 LRPPRCP42704 1394 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-218ENST00000560777 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
RABGGTA-218ENST00000560777 ABCC11Q96J66 1382 aa17.19■□□□□ 0.34
RABGGTA-218ENST00000560777 FBXO41Q8TF61 875 aa17.19■□□□□ 0.34
RABGGTA-218ENST00000560777 ROBO2Q9HCK4 1378 aa17.18■□□□□ 0.34
RABGGTA-218ENST00000560777 YTHDC2Q9H6S0 1430 aaKnown RBP17.18■□□□□ 0.34
RABGGTA-218ENST00000560777 NCOA3Q9Y6Q9 1424 aa17.18■□□□□ 0.34
RABGGTA-218ENST00000560777 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
RABGGTA-218ENST00000560777 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
RABGGTA-218ENST00000560777 NBPF8Q3BBV2 869 aa17.17■□□□□ 0.34
RABGGTA-218ENST00000560777 LAMC1P11047 1609 aa17.17■□□□□ 0.34
RABGGTA-218ENST00000560777 ADGRB1O14514 1584 aa17.16■□□□□ 0.34
RABGGTA-218ENST00000560777 TOM1O60784 492 aa17.16■□□□□ 0.34
RABGGTA-218ENST00000560777 WAPLQ7Z5K2 1190 aa17.16■□□□□ 0.34
RABGGTA-218ENST00000560777 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
RABGGTA-218ENST00000560777 TECPR2O15040 1411 aa17.15■□□□□ 0.34
RABGGTA-218ENST00000560777 PTCH1Q13635 1447 aa17.15■□□□□ 0.34
RABGGTA-218ENST00000560777 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
RABGGTA-218ENST00000560777 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
RABGGTA-218ENST00000560777 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.33
RABGGTA-218ENST00000560777 MSH6P52701 1360 aa17.14■□□□□ 0.33
RABGGTA-218ENST00000560777 TRAK1Q9UPV9 953 aa17.13■□□□□ 0.33
RABGGTA-218ENST00000560777 ILDR1Q86SU0 546 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-218ENST00000560777 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
RABGGTA-218ENST00000560777 PLEKHH1Q9ULM0 1364 aa17.11■□□□□ 0.33
RABGGTA-218ENST00000560777 PRAM1Q96QH2 718 aa17.1■□□□□ 0.33
RABGGTA-218ENST00000560777 FAM135BQ49AJ0 1406 aa17.1■□□□□ 0.33
RABGGTA-218ENST00000560777 KNDC1Q76NI1 1749 aa17.1■□□□□ 0.33
RABGGTA-218ENST00000560777 ATF3P18847 181 aa17.09■□□□□ 0.33
RABGGTA-218ENST00000560777 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
RABGGTA-218ENST00000560777 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
RABGGTA-218ENST00000560777 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
RABGGTA-218ENST00000560777 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-218ENST00000560777 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.32
RABGGTA-218ENST00000560777 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms