RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 HNRNPUQ00839 825 aaKnown RBP eCLIP26.14■■□□□ 1.77
HMBOX1-215ENST00000560599 PPLO60437 1756 aa26.13■■□□□ 1.77
HMBOX1-215ENST00000560599 SETBP1Q9Y6X0 1596 aa26.11■■□□□ 1.77
HMBOX1-215ENST00000560599 CCDC184Q52MB2 194 aa26.1■■□□□ 1.77
HMBOX1-215ENST00000560599 SYNMO15061 1565 aa26.1■■□□□ 1.77
HMBOX1-215ENST00000560599 SIGLEC1Q9BZZ2 1709 aa26.1■■□□□ 1.77
HMBOX1-215ENST00000560599 RALBP1Q15311 655 aa26.09■■□□□ 1.77
HMBOX1-215ENST00000560599 MYO3AQ8NEV4 1616 aa26.07■■□□□ 1.76
HMBOX1-215ENST00000560599 RPGRIP1LQ68CZ1 1315 aa26.07■■□□□ 1.76
HMBOX1-215ENST00000560599 AGLP35573 1532 aa26.07■■□□□ 1.76
HMBOX1-215ENST00000560599 TSPOAP1O95153 1857 aa26.06■■□□□ 1.76
HMBOX1-215ENST00000560599 CDCA8Q53HL2 280 aa26.06■■□□□ 1.76
HMBOX1-215ENST00000560599 MYBBP1AQ9BQG0 1328 aaKnown RBP26.04■■□□□ 1.76
HMBOX1-215ENST00000560599 SLC24A1O60721 1099 aa26.04■■□□□ 1.76
HMBOX1-215ENST00000560599 SUPT16HQ9Y5B9 1047 aaKnown RBP26.04■■□□□ 1.76
HMBOX1-215ENST00000560599 BRD4O60885 1362 aaPredicted RBP26.03■■□□□ 1.76
HMBOX1-215ENST00000560599 KDM5AP29375 1690 aaKnown RBP26.02■■□□□ 1.76
HMBOX1-215ENST00000560599 PREX1Q8TCU6 1659 aa26.02■■□□□ 1.76
HMBOX1-215ENST00000560599 PARD3Q8TEW0 1356 aa26.02■■□□□ 1.76
HMBOX1-215ENST00000560599 PIK3C2GO75747 1445 aa26.02■■□□□ 1.76
HMBOX1-215ENST00000560599 ZBED9Q6R2W3 1325 aa26.01■■□□□ 1.75
HMBOX1-215ENST00000560599 ADGRF5Q8IZF2 1346 aa26.01■■□□□ 1.75
HMBOX1-215ENST00000560599 FAM9BQ8IZU0 186 aa26.01■■□□□ 1.75
HMBOX1-215ENST00000560599 ARHGEF40Q8TER5 1519 aa26■■□□□ 1.75
HMBOX1-215ENST00000560599 KIF13AQ9H1H9 1805 aa26■■□□□ 1.75
HMBOX1-215ENST00000560599 NEFLP07196 543 aa25.99■■□□□ 1.75
HMBOX1-215ENST00000560599 NEXMIFQ5QGS0 1516 aa25.98■■□□□ 1.75
HMBOX1-215ENST00000560599 CHGAP10645 457 aaKnown RBP25.97■■□□□ 1.75
HMBOX1-215ENST00000560599 SBNO2Q9Y2G9 1366 aa25.96■■□□□ 1.75
HMBOX1-215ENST00000560599 CFAP70Q5T0N1 1121 aa25.96■■□□□ 1.75
HMBOX1-215ENST00000560599 MYOM1P52179 1685 aa25.96■■□□□ 1.75
HMBOX1-215ENST00000560599 TMC1Q8TDI8 760 aa25.94■■□□□ 1.74
HMBOX1-215ENST00000560599 CFAP65Q6ZU64 1925 aaKnown RBP25.93■■□□□ 1.74
HMBOX1-215ENST00000560599 PER1O15534 1290 aaPredicted RBP25.93■■□□□ 1.74
HMBOX1-215ENST00000560599 PPP6R1Q9UPN7 881 aa25.93■■□□□ 1.74
HMBOX1-215ENST00000560599 ADGRB1O14514 1584 aa25.92■■□□□ 1.74
HMBOX1-215ENST00000560599 SLC52A1Q9NWF4 448 aa25.92■■□□□ 1.74
HMBOX1-215ENST00000560599 NLRP13Q86W25 1043 aa25.91■■□□□ 1.74
HMBOX1-215ENST00000560599 PANK3Q9H999 370 aa25.9■■□□□ 1.74
HMBOX1-215ENST00000560599 ERVK-7P63135 1459 aa25.9■■□□□ 1.74
HMBOX1-215ENST00000560599 ZFYVE9O95405 1425 aa25.9■■□□□ 1.74
HMBOX1-215ENST00000560599 LRPPRCP42704 1394 aaKnown RBP25.89■■□□□ 1.74
HMBOX1-215ENST00000560599 CNGB1Q14028 1251 aaPredicted RBP25.89■■□□□ 1.74
HMBOX1-215ENST00000560599 PELP1Q8IZL8 1130 aaKnown RBP25.88■■□□□ 1.73
HMBOX1-215ENST00000560599 TMEM131LA2VDJ0 1609 aa25.88■■□□□ 1.73
HMBOX1-215ENST00000560599 PNISRQ8TF01 805 aaKnown RBP25.88■■□□□ 1.73
HMBOX1-215ENST00000560599 C14orf93Q9H972 538 aaKnown RBP25.88■■□□□ 1.73
HMBOX1-215ENST00000560599 QRICH2Q9H0J4 1663 aa25.87■■□□□ 1.73
HMBOX1-215ENST00000560599 CLTCQ00610 1675 aaKnown RBP25.85■■□□□ 1.73
HMBOX1-215ENST00000560599 ASXL1Q8IXJ9 1541 aa25.85■■□□□ 1.73
HMBOX1-215ENST00000560599 VGFO15240 615 aaPredicted RBP25.84■■□□□ 1.73
HMBOX1-215ENST00000560599 INSRP06213 1382 aa25.84■■□□□ 1.73
HMBOX1-215ENST00000560599 FKBP8Q14318 412 aa25.83■■□□□ 1.73
HMBOX1-215ENST00000560599 CENPJQ9HC77 1338 aaPredicted RBP25.83■■□□□ 1.73
HMBOX1-215ENST00000560599 NPC1L1Q9UHC9 1359 aa25.82■■□□□ 1.72
HMBOX1-215ENST00000560599 SPATA31D1Q6ZQQ2 1576 aa25.81■■□□□ 1.72
HMBOX1-215ENST00000560599 KNSTRNQ9Y448 316 aa25.8■■□□□ 1.72
HMBOX1-215ENST00000560599 ARHGEF28Q8N1W1 1705 aaKnown RBP25.79■■□□□ 1.72
HMBOX1-215ENST00000560599 MYO5BQ9ULV0 1848 aa25.79■■□□□ 1.72
HMBOX1-215ENST00000560599 IDI1Q13907 227 aa25.79■■□□□ 1.72
HMBOX1-215ENST00000560599 SMG6Q86US8 1419 aaKnown RBP25.77■■□□□ 1.72
HMBOX1-215ENST00000560599 CC2D1BQ5T0F9 858 aaKnown RBP25.76■■□□□ 1.71
HMBOX1-215ENST00000560599 BLMP54132 1417 aaPredicted RBP25.71■■□□□ 1.71
HMBOX1-215ENST00000560599 AMER1Q5JTC6 1135 aaPredicted RBP25.71■■□□□ 1.71
HMBOX1-215ENST00000560599 TRAK1Q9UPV9 953 aa25.7■■□□□ 1.7
HMBOX1-215ENST00000560599 USP32Q8NFA0 1604 aa25.68■■□□□ 1.7
HMBOX1-215ENST00000560599 ERICH6BQ5W0A0 696 aa25.68■■□□□ 1.7
HMBOX1-215ENST00000560599 PUS7Q96PZ0 661 aaKnown RBP25.68■■□□□ 1.7
HMBOX1-215ENST00000560599 NUDCQ9Y266 331 aa25.66■■□□□ 1.7
HMBOX1-215ENST00000560599 TULP4Q9NRJ4 1543 aa25.64■■□□□ 1.7
HMBOX1-215ENST00000560599 FBXO31Q5XUX0 539 aaPredicted RBP25.64■■□□□ 1.7
HMBOX1-215ENST00000560599 TMEM132EQ6IEE7 984 aa25.64■■□□□ 1.7
HMBOX1-215ENST00000560599 A2ML1A8K2U0 1454 aa25.64■■□□□ 1.69
HMBOX1-215ENST00000560599 ALKQ9UM73 1620 aa25.62■■□□□ 1.69
HMBOX1-215ENST00000560599 PPP2R1AP30153 589 aa25.62■■□□□ 1.69
HMBOX1-215ENST00000560599 BCANQ96GW7 911 aa25.62■■□□□ 1.69
HMBOX1-215ENST00000560599 STAG3Q9UJ98 1225 aa25.61■■□□□ 1.69
HMBOX1-215ENST00000560599 EVC2Q86UK5 1308 aa25.61■■□□□ 1.69
HMBOX1-215ENST00000560599 NUTM2DQ5VT03 806 aaPredicted RBP25.6■■□□□ 1.69
HMBOX1-215ENST00000560599 ESF1Q9H501 851 aaKnown RBP25.6■■□□□ 1.69
HMBOX1-215ENST00000560599 RIMS2Q9UQ26 1411 aa25.59■■□□□ 1.69
HMBOX1-215ENST00000560599 PTPRMP28827 1452 aa25.58■■□□□ 1.69
HMBOX1-215ENST00000560599 NINLQ9Y2I6 1382 aa25.58■■□□□ 1.69
HMBOX1-215ENST00000560599 YTHDC2Q9H6S0 1430 aaKnown RBP25.58■■□□□ 1.69
HMBOX1-215ENST00000560599 MLECQ14165 292 aa25.56■■□□□ 1.68
HMBOX1-215ENST00000560599 NSD3Q9BZ95 1437 aa25.56■■□□□ 1.68
HMBOX1-215ENST00000560599 DLC1Q96QB1 1528 aa25.56■■□□□ 1.68
HMBOX1-215ENST00000560599 PDE3BQ13370 1112 aa25.55■■□□□ 1.68
HMBOX1-215ENST00000560599 SETD1AO15047 1707 aaKnown RBP25.54■■□□□ 1.68
HMBOX1-215ENST00000560599 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
HMBOX1-215ENST00000560599 WDR43Q15061 677 aaKnown RBP eCLIP25.52■■□□□ 1.68
HMBOX1-215ENST00000560599 CARD14Q9BXL6 1004 aa25.52■■□□□ 1.68
HMBOX1-215ENST00000560599 ANKRD36BQ8N2N9 1353 aa25.51■■□□□ 1.67
HMBOX1-215ENST00000560599 NSD2O96028 1365 aa25.5■■□□□ 1.67
HMBOX1-215ENST00000560599 TNRQ92752 1358 aa25.5■■□□□ 1.67
HMBOX1-215ENST00000560599 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.49■■□□□ 1.67
HMBOX1-215ENST00000560599 ATAD2Q6PL18 1390 aa25.49■■□□□ 1.67
HMBOX1-215ENST00000560599 RNF123Q5XPI4 1314 aa25.48■■□□□ 1.67
HMBOX1-215ENST00000560599 NRXN3Q9Y4C0 1643 aa25.46■■□□□ 1.67
HMBOX1-215ENST00000560599 KNDC1Q76NI1 1749 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms