RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 NISCHQ9Y2I1 1504 aa42.03■■■■■ 4.32
HMBOX1-215ENST00000560599 CCDC180Q9P1Z9 1646 aa36.51■■■■□ 3.44
HMBOX1-215ENST00000560599 ZCCHC6Q5VYS8 1495 aaKnown RBP35.48■■■■□ 3.27
HMBOX1-215ENST00000560599 DCAF1Q9Y4B6 1507 aa34.84■■■■□ 3.17
HMBOX1-215ENST00000560599 SHROOM4Q9ULL8 1493 aa34.57■■■■□ 3.12
HMBOX1-215ENST00000560599 DCAF8L2P0C7V8 631 aa34.31■■■■□ 3.08
HMBOX1-215ENST00000560599 MYO15BQ96JP2 1530 aa34.21■■■■□ 3.07
HMBOX1-215ENST00000560599 ABCC9O60706 1549 aa33.84■■■■□ 3.01
HMBOX1-215ENST00000560599 NACADO15069 1562 aa33.81■■■■□ 3
HMBOX1-215ENST00000560599 SCRIBQ14160 1630 aa33.57■■■□□ 2.96
HMBOX1-215ENST00000560599 SUPT5HO00267 1087 aaKnown RBP33.51■■■□□ 2.95
HMBOX1-215ENST00000560599 RB1CC1Q8TDY2 1594 aa33.39■■■□□ 2.94
HMBOX1-215ENST00000560599 RSF1Q96T23 1441 aaPredicted RBP32.78■■■□□ 2.84
HMBOX1-215ENST00000560599 UNC13AQ9UPW8 1703 aa32.69■■■□□ 2.82
HMBOX1-215ENST00000560599 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
HMBOX1-215ENST00000560599 MROH2BQ7Z745 1585 aa32.46■■■□□ 2.79
HMBOX1-215ENST00000560599 BAZ1AQ9NRL2 1556 aaPredicted RBP32.46■■■□□ 2.79
HMBOX1-215ENST00000560599 CHIC1Q5VXU3 224 aa32.4■■■□□ 2.78
HMBOX1-215ENST00000560599 BICRAQ9NZM4 1560 aa32.31■■■□□ 2.76
HMBOX1-215ENST00000560599 WIZO95785 1651 aa32.24■■■□□ 2.75
HMBOX1-215ENST00000560599 SMARCA4P51532 1647 aa32.24■■■□□ 2.75
HMBOX1-215ENST00000560599 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
HMBOX1-215ENST00000560599 PABPN1Q86U42 306 aaKnown RBP eCLIP31.92■■■□□ 2.7
HMBOX1-215ENST00000560599 PEG3Q9GZU2 1588 aa31.83■■■□□ 2.69
HMBOX1-215ENST00000560599 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
HMBOX1-215ENST00000560599 SMARCA2P51531 1590 aa31.7■■■□□ 2.66
HMBOX1-215ENST00000560599 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
HMBOX1-215ENST00000560599 TRIM41Q8WV44 630 aa31.5■■■□□ 2.63
HMBOX1-215ENST00000560599 ATAD2BQ9ULI0 1458 aa31.5■■■□□ 2.63
HMBOX1-215ENST00000560599 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
HMBOX1-215ENST00000560599 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
HMBOX1-215ENST00000560599 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
HMBOX1-215ENST00000560599 ABCC8Q09428 1581 aa31.11■■■□□ 2.57
HMBOX1-215ENST00000560599 LOC105371045A0A1W2PR82 267 aa31.09■■■□□ 2.57
HMBOX1-215ENST00000560599 FAM9AQ8IZU1 332 aaPredicted RBP30.9■■■□□ 2.54
HMBOX1-215ENST00000560599 WRNQ14191 1432 aaPredicted RBP eCLIP30.88■■■□□ 2.53
HMBOX1-215ENST00000560599 EEA1Q15075 1411 aa30.83■■■□□ 2.53
HMBOX1-215ENST00000560599 SYNJ1O43426 1573 aa30.75■■■□□ 2.51
HMBOX1-215ENST00000560599 CC2D2AQ9P2K1 1620 aa30.69■■■□□ 2.5
HMBOX1-215ENST00000560599 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
HMBOX1-215ENST00000560599 CFTRP13569 1480 aa30.61■■■□□ 2.49
HMBOX1-215ENST00000560599 TOP2BQ02880 1626 aa30.61■■■□□ 2.49
HMBOX1-215ENST00000560599 BIVM-ERCC5R4GMW8 1640 aa30.61■■■□□ 2.49
HMBOX1-215ENST00000560599 SOGA1O94964 1423 aa30.6■■■□□ 2.49
HMBOX1-215ENST00000560599 RUSC2Q8N2Y8 1516 aa30.43■■■□□ 2.46
HMBOX1-215ENST00000560599 CSRNP3Q8WYN3 585 aa30.43■■■□□ 2.46
HMBOX1-215ENST00000560599 KIF21BO75037 1637 aa30.4■■■□□ 2.46
HMBOX1-215ENST00000560599 GOLGA3Q08378 1498 aa30.4■■■□□ 2.46
HMBOX1-215ENST00000560599 EHMT2Q96KQ7 1210 aa30.39■■■□□ 2.45
HMBOX1-215ENST00000560599 TNIKQ9UKE5 1360 aa30.36■■■□□ 2.45
HMBOX1-215ENST00000560599 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
HMBOX1-215ENST00000560599 CUX1P39880 1505 aa30.36■■■□□ 2.45
HMBOX1-215ENST00000560599 CEP164Q9UPV0 1460 aa30.34■■■□□ 2.45
HMBOX1-215ENST00000560599 PCGF6Q9BYE7 350 aa30.33■■■□□ 2.45
HMBOX1-215ENST00000560599 TRIM26Q12899 539 aaPredicted RBP30.27■■■□□ 2.44
HMBOX1-215ENST00000560599 CEP162Q5TB80 1403 aa30.24■■■□□ 2.43
HMBOX1-215ENST00000560599 ERICH3Q5RHP9 1530 aa30.09■■■□□ 2.41
HMBOX1-215ENST00000560599 UBTFP17480 764 aaKnown RBP30.08■■■□□ 2.41
HMBOX1-215ENST00000560599 KIF27Q86VH2 1401 aa30.07■■■□□ 2.4
HMBOX1-215ENST00000560599 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
HMBOX1-215ENST00000560599 LAMC3Q9Y6N6 1575 aa30.05■■■□□ 2.4
HMBOX1-215ENST00000560599 HRCP23327 699 aa30.02■■■□□ 2.4
HMBOX1-215ENST00000560599 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
HMBOX1-215ENST00000560599 PRXQ9BXM0 1461 aa29.99■■■□□ 2.39
HMBOX1-215ENST00000560599 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
HMBOX1-215ENST00000560599 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
HMBOX1-215ENST00000560599 CLIP1P30622 1438 aa29.88■■■□□ 2.37
HMBOX1-215ENST00000560599 NESP48681 1621 aa29.87■■■□□ 2.37
HMBOX1-215ENST00000560599 CUX2O14529 1486 aa29.85■■■□□ 2.37
HMBOX1-215ENST00000560599 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
HMBOX1-215ENST00000560599 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.35
HMBOX1-215ENST00000560599 VPS8Q8N3P4 1428 aa29.72■■■□□ 2.35
HMBOX1-215ENST00000560599 POLA1P09884 1462 aaPredicted RBP29.7■■■□□ 2.34
HMBOX1-215ENST00000560599 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.34
HMBOX1-215ENST00000560599 URB2Q14146 1524 aaKnown RBP29.65■■■□□ 2.34
HMBOX1-215ENST00000560599 IGF1RP08069 1367 aa29.64■■■□□ 2.33
HMBOX1-215ENST00000560599 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
HMBOX1-215ENST00000560599 KIF21AQ7Z4S6 1674 aa29.61■■■□□ 2.33
HMBOX1-215ENST00000560599 PPARGC1BQ86YN6 1023 aaKnown RBP29.58■■■□□ 2.33
HMBOX1-215ENST00000560599 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
HMBOX1-215ENST00000560599 CUL7Q14999 1698 aa29.55■■■□□ 2.32
HMBOX1-215ENST00000560599 CARMIL1Q5VZK9 1371 aa29.54■■■□□ 2.32
HMBOX1-215ENST00000560599 ARAP1Q96P48 1450 aa29.54■■■□□ 2.32
HMBOX1-215ENST00000560599 DNAJC5BQ9UF47 199 aa29.48■■■□□ 2.31
HMBOX1-215ENST00000560599 ABCA5Q8WWZ7 1642 aa29.46■■■□□ 2.31
HMBOX1-215ENST00000560599 ZEB1P37275 1124 aaPredicted RBP29.45■■■□□ 2.31
HMBOX1-215ENST00000560599 ARHGAP35Q9NRY4 1499 aa29.39■■■□□ 2.3
HMBOX1-215ENST00000560599 MRC2Q9UBG0 1479 aa29.39■■■□□ 2.3
HMBOX1-215ENST00000560599 APLP2Q06481 763 aa29.38■■■□□ 2.29
HMBOX1-215ENST00000560599 RANGAP1P46060 587 aaPredicted RBP29.34■■■□□ 2.29
HMBOX1-215ENST00000560599 TARBP1Q13395 1621 aaKnown RBP29.33■■■□□ 2.29
HMBOX1-215ENST00000560599 GAPVD1Q14C86 1478 aa29.3■■■□□ 2.28
HMBOX1-215ENST00000560599 CTTNBP2Q8WZ74 1663 aa29.29■■■□□ 2.28
HMBOX1-215ENST00000560599 TTBK1Q5TCY1 1321 aaPredicted RBP29.28■■■□□ 2.28
HMBOX1-215ENST00000560599 EFCAB5A4FU69 1503 aa29.24■■■□□ 2.27
HMBOX1-215ENST00000560599 WDR62O43379 1518 aa29.22■■■□□ 2.27
HMBOX1-215ENST00000560599 PBRM1Q86U86 1689 aa29.18■■■□□ 2.26
HMBOX1-215ENST00000560599 TDRD9Q8NDG6 1382 aaKnown RBP29.17■■■□□ 2.26
HMBOX1-215ENST00000560599 MAP3K1Q13233 1512 aa29.15■■■□□ 2.26
HMBOX1-215ENST00000560599 FHAD1B1AJZ9 1412 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms