RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 TRPM1Q7Z4N2 1603 aa23.13■■□□□ 1.29
PBX1-215ENST00000559240 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
PBX1-215ENST00000559240 TNRQ92752 1358 aa23.12■■□□□ 1.29
PBX1-215ENST00000559240 NEXMIFQ5QGS0 1516 aa23.12■■□□□ 1.29
PBX1-215ENST00000559240 ZFYVE9O95405 1425 aa23.12■■□□□ 1.29
PBX1-215ENST00000559240 FBXO31Q5XUX0 539 aaPredicted RBP23.11■■□□□ 1.29
PBX1-215ENST00000559240 MYO5BQ9ULV0 1848 aa23.1■■□□□ 1.29
PBX1-215ENST00000559240 IDI1Q13907 227 aa23.09■■□□□ 1.29
PBX1-215ENST00000559240 UBR1Q8IWV7 1749 aa23.09■■□□□ 1.29
PBX1-215ENST00000559240 A2ML1A8K2U0 1454 aa23.07■■□□□ 1.28
PBX1-215ENST00000559240 MYO3AQ8NEV4 1616 aa23.07■■□□□ 1.28
PBX1-215ENST00000559240 ZNF142P52746 1687 aaPredicted RBP23.07■■□□□ 1.28
PBX1-215ENST00000559240 NBPF8Q3BBV2 869 aa23.06■■□□□ 1.28
PBX1-215ENST00000559240 DCAF11Q8TEB1 546 aa23.05■■□□□ 1.28
PBX1-215ENST00000559240 GPRASP1Q5JY77 1395 aa23.05■■□□□ 1.28
PBX1-215ENST00000559240 SETBP1Q9Y6X0 1596 aa23.01■■□□□ 1.27
PBX1-215ENST00000559240 RGL3Q3MIN7 710 aa23■■□□□ 1.27
PBX1-215ENST00000559240 PIK3C2GO75747 1445 aa23■■□□□ 1.27
PBX1-215ENST00000559240 PTPRMP28827 1452 aa23■■□□□ 1.27
PBX1-215ENST00000559240 SLIT1O75093 1534 aa22.98■■□□□ 1.27
PBX1-215ENST00000559240 SETD1BQ9UPS6 1966 aaKnown RBP22.98■■□□□ 1.27
PBX1-215ENST00000559240 ARHGAP23Q9P227 1491 aa22.97■■□□□ 1.27
PBX1-215ENST00000559240 CEP170BQ9Y4F5 1589 aaPredicted RBP22.97■■□□□ 1.27
PBX1-215ENST00000559240 IQGAP1P46940 1657 aa22.94■■□□□ 1.26
PBX1-215ENST00000559240 VGFO15240 615 aaPredicted RBP22.94■■□□□ 1.26
PBX1-215ENST00000559240 CCDC136Q96JN2 1154 aa22.93■■□□□ 1.26
PBX1-215ENST00000559240 RIMS2Q9UQ26 1411 aa22.92■■□□□ 1.26
PBX1-215ENST00000559240 CEBPAP49715 358 aaPredicted RBP22.92■■□□□ 1.26
PBX1-215ENST00000559240 KDM2AQ9Y2K7 1162 aa22.92■■□□□ 1.26
PBX1-215ENST00000559240 ZNF326Q5BKZ1 582 aaKnown RBP22.91■■□□□ 1.26
PBX1-215ENST00000559240 TMEM2Q9UHN6 1383 aa22.91■■□□□ 1.26
PBX1-215ENST00000559240 ZNF316A6NFI3 1004 aaPredicted RBP22.9■■□□□ 1.26
PBX1-215ENST00000559240 ADGRF5Q8IZF2 1346 aa22.9■■□□□ 1.26
PBX1-215ENST00000559240 CHGAP10645 457 aaKnown RBP22.9■■□□□ 1.26
PBX1-215ENST00000559240 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.9■■□□□ 1.26
PBX1-215ENST00000559240 SETD1AO15047 1707 aaKnown RBP22.89■■□□□ 1.26
PBX1-215ENST00000559240 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
PBX1-215ENST00000559240 ROCK2O75116 1388 aaKnown RBP22.88■■□□□ 1.25
PBX1-215ENST00000559240 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
PBX1-215ENST00000559240 SALL2Q9Y467 1007 aaPredicted RBP22.87■■□□□ 1.25
PBX1-215ENST00000559240 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
PBX1-215ENST00000559240 NRXN3Q9Y4C0 1643 aa22.87■■□□□ 1.25
PBX1-215ENST00000559240 EIF5BO60841 1220 aaKnown RBP22.87■■□□□ 1.25
PBX1-215ENST00000559240 HDGFP51858 240 aaKnown RBP22.87■■□□□ 1.25
PBX1-215ENST00000559240 C14orf93Q9H972 538 aaKnown RBP22.86■■□□□ 1.25
PBX1-215ENST00000559240 STAG3Q9UJ98 1225 aa22.85■■□□□ 1.25
PBX1-215ENST00000559240 EIF4G2P78344 907 aaKnown RBP eCLIP22.85■■□□□ 1.25
PBX1-215ENST00000559240 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
PBX1-215ENST00000559240 ALKQ9UM73 1620 aa22.83■■□□□ 1.25
PBX1-215ENST00000559240 USP47Q96K76 1375 aa22.83■■□□□ 1.24
PBX1-215ENST00000559240 DIP2AQ14689 1571 aa22.81■■□□□ 1.24
PBX1-215ENST00000559240 THEMISQ8N1K5 641 aaPredicted RBP22.81■■□□□ 1.24
PBX1-215ENST00000559240 UBE2Q2Q8WVN8 375 aa22.81■■□□□ 1.24
PBX1-215ENST00000559240 PLEKHG1Q9ULL1 1385 aa22.81■■□□□ 1.24
PBX1-215ENST00000559240 CARD11Q9BXL7 1154 aa22.8■■□□□ 1.24
PBX1-215ENST00000559240 ASXL1Q8IXJ9 1541 aa22.8■■□□□ 1.24
PBX1-215ENST00000559240 HSPA5P11021 654 aaKnown RBP22.78■■□□□ 1.24
PBX1-215ENST00000559240 NBPF1Q3BBV0 1214 aa22.78■■□□□ 1.24
PBX1-215ENST00000559240 MED14O60244 1454 aa22.78■■□□□ 1.24
PBX1-215ENST00000559240 KDM4FA0A1W2PPD8 638 aa22.77■■□□□ 1.24
PBX1-215ENST00000559240 KNDC1Q76NI1 1749 aa22.76■■□□□ 1.23
PBX1-215ENST00000559240 CFAP70Q5T0N1 1121 aa22.75■■□□□ 1.23
PBX1-215ENST00000559240 DLC1Q96QB1 1528 aa22.75■■□□□ 1.23
PBX1-215ENST00000559240 EIF3AQ14152 1382 aaKnown RBP22.74■■□□□ 1.23
PBX1-215ENST00000559240 ARHGEF28Q8N1W1 1705 aaKnown RBP22.74■■□□□ 1.23
PBX1-215ENST00000559240 SBNO2Q9Y2G9 1366 aa22.72■■□□□ 1.23
PBX1-215ENST00000559240 PLEKHG5O94827 1062 aa22.72■■□□□ 1.23
PBX1-215ENST00000559240 ADAMTS13Q76LX8 1427 aa22.72■■□□□ 1.23
PBX1-215ENST00000559240 EID1Q9Y6B2 187 aa22.71■■□□□ 1.23
PBX1-215ENST00000559240 TECPR2O15040 1411 aa22.68■■□□□ 1.22
PBX1-215ENST00000559240 LTKP29376 864 aa22.68■■□□□ 1.22
PBX1-215ENST00000559240 MIER1Q8N108 512 aa22.67■■□□□ 1.22
PBX1-215ENST00000559240 CPS1P31327 1500 aa22.67■■□□□ 1.22
PBX1-215ENST00000559240 YTHDC2Q9H6S0 1430 aaKnown RBP22.67■■□□□ 1.22
PBX1-215ENST00000559240 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
PBX1-215ENST00000559240 TXNDC2Q86VQ3 553 aa22.66■■□□□ 1.22
PBX1-215ENST00000559240 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
PBX1-215ENST00000559240 PIK3R4Q99570 1358 aa22.65■■□□□ 1.22
PBX1-215ENST00000559240 ABCC11Q96J66 1382 aa22.64■■□□□ 1.22
PBX1-215ENST00000559240 NUTM2DQ5VT03 806 aaPredicted RBP22.64■■□□□ 1.21
PBX1-215ENST00000559240 SIRT1Q96EB6 747 aa22.64■■□□□ 1.21
PBX1-215ENST00000559240 TESK2Q96S53 571 aa22.64■■□□□ 1.21
PBX1-215ENST00000559240 ST20-MTHFSA0A0A6YYL1 179 aa22.63■■□□□ 1.21
PBX1-215ENST00000559240 TBX22Q9Y458 520 aa22.62■■□□□ 1.21
PBX1-215ENST00000559240 LMTK3Q96Q04 1460 aa22.61■■□□□ 1.21
PBX1-215ENST00000559240 CCDC7Q96M83 1385 aa22.61■■□□□ 1.21
PBX1-215ENST00000559240 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
PBX1-215ENST00000559240 ANKLE2Q86XL3 938 aa22.61■■□□□ 1.21
PBX1-215ENST00000559240 XRN1Q8IZH2 1706 aaKnown RBP22.61■■□□□ 1.21
PBX1-215ENST00000559240 FAM135BQ49AJ0 1406 aa22.61■■□□□ 1.21
PBX1-215ENST00000559240 METP08581 1390 aa22.58■■□□□ 1.21
PBX1-215ENST00000559240 WASHC2AQ641Q2 1341 aa22.58■■□□□ 1.21
PBX1-215ENST00000559240 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
PBX1-215ENST00000559240 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.56■■□□□ 1.2
PBX1-215ENST00000559240 CHD2O14647 1828 aaKnown RBP22.56■■□□□ 1.2
PBX1-215ENST00000559240 CENPJQ9HC77 1338 aaPredicted RBP22.56■■□□□ 1.2
PBX1-215ENST00000559240 TMEM132EQ6IEE7 984 aa22.56■■□□□ 1.2
PBX1-215ENST00000559240 PTCH1Q13635 1447 aa22.55■■□□□ 1.2
PBX1-215ENST00000559240 KIF7Q2M1P5 1343 aa22.55■■□□□ 1.2
PBX1-215ENST00000559240 NWD1Q149M9 1564 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms