RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ALKQ9UM73 1620 aa19■□□□□ 0.63
RABGGTA-207ENST00000558936 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
RABGGTA-207ENST00000558936 NRXN3Q9Y4C0 1643 aa19■□□□□ 0.63
RABGGTA-207ENST00000558936 FBXO41Q8TF61 875 aa18.98■□□□□ 0.63
RABGGTA-207ENST00000558936 ADAMTS13Q76LX8 1427 aa18.98■□□□□ 0.63
RABGGTA-207ENST00000558936 NEXMIFQ5QGS0 1516 aa18.97■□□□□ 0.63
RABGGTA-207ENST00000558936 STAG3Q9UJ98 1225 aa18.97■□□□□ 0.63
RABGGTA-207ENST00000558936 KIF1BO60333 1816 aa18.96■□□□□ 0.63
RABGGTA-207ENST00000558936 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
RABGGTA-207ENST00000558936 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
RABGGTA-207ENST00000558936 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
RABGGTA-207ENST00000558936 PLEKHG1Q9ULL1 1385 aa18.93■□□□□ 0.62
RABGGTA-207ENST00000558936 CHD2O14647 1828 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-207ENST00000558936 EID1Q9Y6B2 187 aa18.92■□□□□ 0.62
RABGGTA-207ENST00000558936 SPATA31E1Q6ZUB1 1445 aa18.91■□□□□ 0.62
RABGGTA-207ENST00000558936 SETD1AO15047 1707 aaKnown RBP18.91■□□□□ 0.62
RABGGTA-207ENST00000558936 PPLO60437 1756 aa18.91■□□□□ 0.62
RABGGTA-207ENST00000558936 IQSEC2Q5JU85 1478 aa18.9■□□□□ 0.62
RABGGTA-207ENST00000558936 CPS1P31327 1500 aa18.9■□□□□ 0.62
RABGGTA-207ENST00000558936 NWD1Q149M9 1564 aa18.9■□□□□ 0.62
RABGGTA-207ENST00000558936 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
RABGGTA-207ENST00000558936 IFT172Q9UG01 1749 aa18.89■□□□□ 0.61
RABGGTA-207ENST00000558936 HRCP23327 699 aa18.89■□□□□ 0.61
RABGGTA-207ENST00000558936 SETBP1Q9Y6X0 1596 aa18.88■□□□□ 0.61
RABGGTA-207ENST00000558936 RBM33Q96EV2 1170 aaKnown RBP18.87■□□□□ 0.61
RABGGTA-207ENST00000558936 ANKRD30BQ9BXX2 1392 aa18.87■□□□□ 0.61
RABGGTA-207ENST00000558936 TBX22Q9Y458 520 aa18.84■□□□□ 0.61
RABGGTA-207ENST00000558936 METP08581 1390 aa18.83■□□□□ 0.61
RABGGTA-207ENST00000558936 KCNA6P17658 529 aa18.83■□□□□ 0.6
RABGGTA-207ENST00000558936 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
RABGGTA-207ENST00000558936 ZNF326Q5BKZ1 582 aaKnown RBP18.81■□□□□ 0.6
RABGGTA-207ENST00000558936 CCDC144AA2RUR9 1427 aa18.81■□□□□ 0.6
RABGGTA-207ENST00000558936 XRN1Q8IZH2 1706 aaKnown RBP18.8■□□□□ 0.6
RABGGTA-207ENST00000558936 ADGRF5Q8IZF2 1346 aa18.8■□□□□ 0.6
RABGGTA-207ENST00000558936 DIP2AQ14689 1571 aa18.8■□□□□ 0.6
RABGGTA-207ENST00000558936 PPP1R15AO75807 674 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-207ENST00000558936 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
RABGGTA-207ENST00000558936 TMEM94Q12767 1356 aa18.78■□□□□ 0.6
RABGGTA-207ENST00000558936 ASXL1Q8IXJ9 1541 aa18.77■□□□□ 0.6
RABGGTA-207ENST00000558936 NKTRP30414 1462 aaKnown RBP18.76■□□□□ 0.59
RABGGTA-207ENST00000558936 UBAP1LF5GYI3 381 aa18.75■□□□□ 0.59
RABGGTA-207ENST00000558936 HDGFP51858 240 aaKnown RBP18.75■□□□□ 0.59
RABGGTA-207ENST00000558936 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
RABGGTA-207ENST00000558936 BCANQ96GW7 911 aa18.74■□□□□ 0.59
RABGGTA-207ENST00000558936 NRXN1Q9ULB1 1477 aa18.73■□□□□ 0.59
RABGGTA-207ENST00000558936 DHX57Q6P158 1386 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-207ENST00000558936 PIK3R4Q99570 1358 aa18.73■□□□□ 0.59
RABGGTA-207ENST00000558936 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-207ENST00000558936 AMOTL2Q9Y2J4 779 aa18.72■□□□□ 0.59
RABGGTA-207ENST00000558936 PROSER2Q86WR7 435 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-207ENST00000558936 PIK3C2GO75747 1445 aa18.71■□□□□ 0.59
RABGGTA-207ENST00000558936 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.69■□□□□ 0.58
RABGGTA-207ENST00000558936 VGFO15240 615 aaPredicted RBP18.69■□□□□ 0.58
RABGGTA-207ENST00000558936 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
RABGGTA-207ENST00000558936 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
RABGGTA-207ENST00000558936 MYOM2P54296 1465 aa18.66■□□□□ 0.58
RABGGTA-207ENST00000558936 PIP4K2BP78356 416 aa18.66■□□□□ 0.58
RABGGTA-207ENST00000558936 NALCNQ8IZF0 1738 aa18.66■□□□□ 0.58
RABGGTA-207ENST00000558936 PRAG1Q86YV5 1406 aa18.66■□□□□ 0.58
RABGGTA-207ENST00000558936 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.57
RABGGTA-207ENST00000558936 TOM1O60784 492 aa18.63■□□□□ 0.57
RABGGTA-207ENST00000558936 HSPA1LP34931 641 aa18.63■□□□□ 0.57
RABGGTA-207ENST00000558936 SIN3AQ96ST3 1273 aa18.63■□□□□ 0.57
RABGGTA-207ENST00000558936 CFAP70Q5T0N1 1121 aa18.62■□□□□ 0.57
RABGGTA-207ENST00000558936 C14orf93Q9H972 538 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-207ENST00000558936 ADGRB1O14514 1584 aa18.61■□□□□ 0.57
RABGGTA-207ENST00000558936 NCOA3Q9Y6Q9 1424 aa18.61■□□□□ 0.57
RABGGTA-207ENST00000558936 ROBO1Q9Y6N7 1651 aa18.6■□□□□ 0.57
RABGGTA-207ENST00000558936 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
RABGGTA-207ENST00000558936 PTCH1Q13635 1447 aa18.59■□□□□ 0.57
RABGGTA-207ENST00000558936 KNDC1Q76NI1 1749 aa18.59■□□□□ 0.57
RABGGTA-207ENST00000558936 TECPR2O15040 1411 aa18.58■□□□□ 0.57
RABGGTA-207ENST00000558936 FAM135BQ49AJ0 1406 aa18.57■□□□□ 0.56
RABGGTA-207ENST00000558936 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
RABGGTA-207ENST00000558936 KDM2AQ9Y2K7 1162 aa18.56■□□□□ 0.56
RABGGTA-207ENST00000558936 LRPPRCP42704 1394 aaKnown RBP18.55■□□□□ 0.56
RABGGTA-207ENST00000558936 MSH6P52701 1360 aa18.55■□□□□ 0.56
RABGGTA-207ENST00000558936 WAPLQ7Z5K2 1190 aa18.55■□□□□ 0.56
RABGGTA-207ENST00000558936 C19orf44Q9H6X5 657 aa18.55■□□□□ 0.56
RABGGTA-207ENST00000558936 MST1RQ04912 1400 aa18.55■□□□□ 0.56
RABGGTA-207ENST00000558936 YTHDC2Q9H6S0 1430 aaKnown RBP18.55■□□□□ 0.56
RABGGTA-207ENST00000558936 ADGRL3Q9HAR2 1447 aa18.55■□□□□ 0.56
RABGGTA-207ENST00000558936 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
RABGGTA-207ENST00000558936 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
RABGGTA-207ENST00000558936 SLAIN2Q9P270 581 aa18.54■□□□□ 0.56
RABGGTA-207ENST00000558936 LAMC1P11047 1609 aa18.52■□□□□ 0.56
RABGGTA-207ENST00000558936 STK26Q9P289 416 aa18.52■□□□□ 0.56
RABGGTA-207ENST00000558936 L3MBTL2Q969R5 705 aa18.51■□□□□ 0.55
RABGGTA-207ENST00000558936 DCCP43146 1447 aa18.49■□□□□ 0.55
RABGGTA-207ENST00000558936 COL16A1Q07092 1604 aaPredicted RBP18.49■□□□□ 0.55
RABGGTA-207ENST00000558936 NBPF1Q3BBV0 1214 aa18.48■□□□□ 0.55
RABGGTA-207ENST00000558936 BRINP3Q76B58 766 aa18.47■□□□□ 0.55
RABGGTA-207ENST00000558936 RGPD8O14715 1765 aaPredicted RBP18.46■□□□□ 0.55
RABGGTA-207ENST00000558936 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
RABGGTA-207ENST00000558936 ARHGEF28Q8N1W1 1705 aaKnown RBP18.46■□□□□ 0.55
RABGGTA-207ENST00000558936 KIAA1210Q9ULL0 1709 aa18.46■□□□□ 0.55
RABGGTA-207ENST00000558936 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.54
RABGGTA-207ENST00000558936 DLC1Q96QB1 1528 aa18.45■□□□□ 0.54
RABGGTA-207ENST00000558936 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
RABGGTA-207ENST00000558936 CADPS2Q86UW7 1296 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms