RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 NEXMIFQ5QGS0 1516 aa25.51■■□□□ 1.67
TPM1-214ENST00000558544 SPATA31E1Q6ZUB1 1445 aa25.51■■□□□ 1.67
TPM1-214ENST00000558544 ANKLE2Q86XL3 938 aa25.51■■□□□ 1.67
TPM1-214ENST00000558544 LTKP29376 864 aa25.49■■□□□ 1.67
TPM1-214ENST00000558544 TXNDC2Q86VQ3 553 aa25.48■■□□□ 1.67
TPM1-214ENST00000558544 EID1Q9Y6B2 187 aa25.48■■□□□ 1.67
TPM1-214ENST00000558544 MED14O60244 1454 aa25.47■■□□□ 1.67
TPM1-214ENST00000558544 RGL3Q3MIN7 710 aa25.45■■□□□ 1.67
TPM1-214ENST00000558544 NUTM2DQ5VT03 806 aaPredicted RBP25.45■■□□□ 1.67
TPM1-214ENST00000558544 NPHP4O75161 1426 aaPredicted RBP25.45■■□□□ 1.66
TPM1-214ENST00000558544 PPP1R15AO75807 674 aaPredicted RBP25.43■■□□□ 1.66
TPM1-214ENST00000558544 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.42■■□□□ 1.66
TPM1-214ENST00000558544 HDGFP51858 240 aaKnown RBP25.41■■□□□ 1.66
TPM1-214ENST00000558544 SIN3AQ96ST3 1273 aa25.41■■□□□ 1.66
TPM1-214ENST00000558544 SENP3Q9H4L4 574 aaPredicted RBP25.4■■□□□ 1.66
TPM1-214ENST00000558544 DMRT2Q9Y5R5 561 aa25.4■■□□□ 1.66
TPM1-214ENST00000558544 RPGRIP1LQ68CZ1 1315 aa25.39■■□□□ 1.66
TPM1-214ENST00000558544 PLEKHG1Q9ULL1 1385 aa25.38■■□□□ 1.65
TPM1-214ENST00000558544 NRXN3Q9Y4C0 1643 aa25.38■■□□□ 1.65
TPM1-214ENST00000558544 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
TPM1-214ENST00000558544 BCANQ96GW7 911 aa25.34■■□□□ 1.65
TPM1-214ENST00000558544 SETBP1Q9Y6X0 1596 aa25.34■■□□□ 1.65
TPM1-214ENST00000558544 MYOM2P54296 1465 aa25.32■■□□□ 1.64
TPM1-214ENST00000558544 VGFO15240 615 aaPredicted RBP25.31■■□□□ 1.64
TPM1-214ENST00000558544 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
TPM1-214ENST00000558544 DIP2AQ14689 1571 aa25.31■■□□□ 1.64
TPM1-214ENST00000558544 SETD1AO15047 1707 aaKnown RBP25.3■■□□□ 1.64
TPM1-214ENST00000558544 ADAMTS13Q76LX8 1427 aa25.3■■□□□ 1.64
TPM1-214ENST00000558544 ADGRF5Q8IZF2 1346 aa25.29■■□□□ 1.64
TPM1-214ENST00000558544 SLC26A8Q96RN1 970 aa25.28■■□□□ 1.64
TPM1-214ENST00000558544 STRCP1A6NGW2 1772 aa25.28■■□□□ 1.64
TPM1-214ENST00000558544 DCAF11Q8TEB1 546 aa25.27■■□□□ 1.64
TPM1-214ENST00000558544 NRXN1Q9ULB1 1477 aa25.26■■□□□ 1.63
TPM1-214ENST00000558544 CLSPNQ9HAW4 1339 aa25.26■■□□□ 1.63
TPM1-214ENST00000558544 PIK3C2GO75747 1445 aa25.26■■□□□ 1.63
TPM1-214ENST00000558544 ALKQ9UM73 1620 aa25.25■■□□□ 1.63
TPM1-214ENST00000558544 CHD2O14647 1828 aaKnown RBP25.25■■□□□ 1.63
TPM1-214ENST00000558544 KDM2AQ9Y2K7 1162 aa25.25■■□□□ 1.63
TPM1-214ENST00000558544 LAMC1P11047 1609 aa25.23■■□□□ 1.63
TPM1-214ENST00000558544 ZNF335Q9H4Z2 1342 aaPredicted RBP25.22■■□□□ 1.63
TPM1-214ENST00000558544 L3MBTL2Q969R5 705 aa25.21■■□□□ 1.63
TPM1-214ENST00000558544 TONSLQ96HA7 1378 aa25.21■■□□□ 1.63
TPM1-214ENST00000558544 NWD1Q149M9 1564 aa25.2■■□□□ 1.62
TPM1-214ENST00000558544 LTBP4Q8N2S1 1624 aa25.2■■□□□ 1.62
TPM1-214ENST00000558544 TBX22Q9Y458 520 aa25.19■■□□□ 1.62
TPM1-214ENST00000558544 STAC3Q96MF2 364 aa25.17■■□□□ 1.62
TPM1-214ENST00000558544 ASXL1Q8IXJ9 1541 aa25.16■■□□□ 1.62
TPM1-214ENST00000558544 XRN1Q8IZH2 1706 aaKnown RBP25.15■■□□□ 1.62
TPM1-214ENST00000558544 METP08581 1390 aa25.15■■□□□ 1.62
TPM1-214ENST00000558544 KIAA1210Q9ULL0 1709 aa25.15■■□□□ 1.62
TPM1-214ENST00000558544 PIK3R4Q99570 1358 aa25.14■■□□□ 1.62
TPM1-214ENST00000558544 PRAG1Q86YV5 1406 aa25.14■■□□□ 1.61
TPM1-214ENST00000558544 PTPRUQ92729 1446 aa25.13■■□□□ 1.61
TPM1-214ENST00000558544 CPS1P31327 1500 aa25.13■■□□□ 1.61
TPM1-214ENST00000558544 CFAP70Q5T0N1 1121 aa25.11■■□□□ 1.61
TPM1-214ENST00000558544 TRPM1Q7Z4N2 1603 aa25.11■■□□□ 1.61
TPM1-214ENST00000558544 XIRP1Q702N8 1843 aaKnown RBP25.1■■□□□ 1.61
TPM1-214ENST00000558544 C14orf93Q9H972 538 aaKnown RBP25.1■■□□□ 1.61
TPM1-214ENST00000558544 NKTRP30414 1462 aaKnown RBP25.1■■□□□ 1.61
TPM1-214ENST00000558544 KCNA6P17658 529 aa25.09■■□□□ 1.61
TPM1-214ENST00000558544 KNDC1Q76NI1 1749 aa25.09■■□□□ 1.61
TPM1-214ENST00000558544 ADGRB1O14514 1584 aa25.07■■□□□ 1.6
TPM1-214ENST00000558544 LRRC7Q96NW7 1537 aa25.06■■□□□ 1.6
TPM1-214ENST00000558544 TMEM132EQ6IEE7 984 aa25.05■■□□□ 1.6
TPM1-214ENST00000558544 AMOTL2Q9Y2J4 779 aa25.05■■□□□ 1.6
TPM1-214ENST00000558544 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
TPM1-214ENST00000558544 NBPF8Q3BBV2 869 aa25.01■■□□□ 1.59
TPM1-214ENST00000558544 LRPPRCP42704 1394 aaKnown RBP25■■□□□ 1.59
TPM1-214ENST00000558544 TIMELESSQ9UNS1 1208 aa25■■□□□ 1.59
TPM1-214ENST00000558544 PTCH1Q13635 1447 aa25■■□□□ 1.59
TPM1-214ENST00000558544 PROSER2Q86WR7 435 aaPredicted RBP24.99■■□□□ 1.59
TPM1-214ENST00000558544 STK26Q9P289 416 aa24.99■■□□□ 1.59
TPM1-214ENST00000558544 ARHGEF28Q8N1W1 1705 aaKnown RBP24.98■■□□□ 1.59
TPM1-214ENST00000558544 TECPR2O15040 1411 aa24.97■■□□□ 1.59
TPM1-214ENST00000558544 CERKQ8TCT0 537 aa24.97■■□□□ 1.59
TPM1-214ENST00000558544 RBM33Q96EV2 1170 aaKnown RBP24.97■■□□□ 1.59
TPM1-214ENST00000558544 TMEM94Q12767 1356 aa24.97■■□□□ 1.59
TPM1-214ENST00000558544 ROBO2Q9HCK4 1378 aa24.97■■□□□ 1.59
TPM1-214ENST00000558544 NBPF1Q3BBV0 1214 aa24.96■■□□□ 1.59
TPM1-214ENST00000558544 NALCNQ8IZF0 1738 aa24.95■■□□□ 1.59
TPM1-214ENST00000558544 ABCC11Q96J66 1382 aa24.95■■□□□ 1.59
TPM1-214ENST00000558544 IQSEC2Q5JU85 1478 aa24.95■■□□□ 1.58
TPM1-214ENST00000558544 RALGAPBQ86X10 1494 aa24.95■■□□□ 1.58
TPM1-214ENST00000558544 DLC1Q96QB1 1528 aa24.94■■□□□ 1.58
TPM1-214ENST00000558544 ROCK2O75116 1388 aaKnown RBP24.94■■□□□ 1.58
TPM1-214ENST00000558544 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.91■■□□□ 1.58
TPM1-214ENST00000558544 TRAK1Q9UPV9 953 aa24.91■■□□□ 1.58
TPM1-214ENST00000558544 PLEKHH1Q9ULM0 1364 aa24.88■■□□□ 1.57
TPM1-214ENST00000558544 FAM135BQ49AJ0 1406 aa24.88■■□□□ 1.57
TPM1-214ENST00000558544 NCOA3Q9Y6Q9 1424 aa24.87■■□□□ 1.57
TPM1-214ENST00000558544 WAPLQ7Z5K2 1190 aa24.87■■□□□ 1.57
TPM1-214ENST00000558544 C14orf37Q86TY3 774 aa24.87■■□□□ 1.57
TPM1-214ENST00000558544 GPRASP1Q5JY77 1395 aa24.87■■□□□ 1.57
TPM1-214ENST00000558544 ADGRL3Q9HAR2 1447 aa24.86■■□□□ 1.57
TPM1-214ENST00000558544 MSH6P52701 1360 aa24.85■■□□□ 1.57
TPM1-214ENST00000558544 PRAM1Q96QH2 718 aa24.84■■□□□ 1.57
TPM1-214ENST00000558544 QRICH2Q9H0J4 1663 aa24.84■■□□□ 1.57
TPM1-214ENST00000558544 SIRT1Q96EB6 747 aa24.83■■□□□ 1.57
TPM1-214ENST00000558544 CARD11Q9BXL7 1154 aa24.82■■□□□ 1.56
TPM1-214ENST00000558544 SAFB2Q14151 953 aaKnown RBP eCLIP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms