RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
SMAD3-205ENST00000558428 CCDC144AA2RUR9 1427 aa18.23■□□□□ 0.51
SMAD3-205ENST00000558428 PPP1R15AO75807 674 aaPredicted RBP18.22■□□□□ 0.51
SMAD3-205ENST00000558428 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
SMAD3-205ENST00000558428 ZNF335Q9H4Z2 1342 aaPredicted RBP18.22■□□□□ 0.51
SMAD3-205ENST00000558428 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
SMAD3-205ENST00000558428 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMAD3-205ENST00000558428 BCANQ96GW7 911 aa18.19■□□□□ 0.5
SMAD3-205ENST00000558428 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
SMAD3-205ENST00000558428 LTBP4Q8N2S1 1624 aa18.18■□□□□ 0.5
SMAD3-205ENST00000558428 PLEKHG1Q9ULL1 1385 aa18.17■□□□□ 0.5
SMAD3-205ENST00000558428 NEXMIFQ5QGS0 1516 aa18.15■□□□□ 0.5
SMAD3-205ENST00000558428 CERKQ8TCT0 537 aa18.15■□□□□ 0.5
SMAD3-205ENST00000558428 ANKRD30BQ9BXX2 1392 aa18.15■□□□□ 0.5
SMAD3-205ENST00000558428 SLC26A8Q96RN1 970 aa18.14■□□□□ 0.49
SMAD3-205ENST00000558428 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
SMAD3-205ENST00000558428 RPGRIP1LQ68CZ1 1315 aa18.12■□□□□ 0.49
SMAD3-205ENST00000558428 SPATA31E1Q6ZUB1 1445 aa18.12■□□□□ 0.49
SMAD3-205ENST00000558428 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
SMAD3-205ENST00000558428 PPLO60437 1756 aa18.12■□□□□ 0.49
SMAD3-205ENST00000558428 CPS1P31327 1500 aa18.1■□□□□ 0.49
SMAD3-205ENST00000558428 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
SMAD3-205ENST00000558428 DIP2AQ14689 1571 aa18.08■□□□□ 0.49
SMAD3-205ENST00000558428 ADAMTS13Q76LX8 1427 aa18.08■□□□□ 0.49
SMAD3-205ENST00000558428 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.48
SMAD3-205ENST00000558428 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
SMAD3-205ENST00000558428 TBX22Q9Y458 520 aa18.07■□□□□ 0.48
SMAD3-205ENST00000558428 NRXN3Q9Y4C0 1643 aa18.07■□□□□ 0.48
SMAD3-205ENST00000558428 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
SMAD3-205ENST00000558428 KCNA6P17658 529 aa18.05■□□□□ 0.48
SMAD3-205ENST00000558428 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
SMAD3-205ENST00000558428 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
SMAD3-205ENST00000558428 NWD1Q149M9 1564 aa18.03■□□□□ 0.48
SMAD3-205ENST00000558428 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
SMAD3-205ENST00000558428 LRRC7Q96NW7 1537 aa18.02■□□□□ 0.47
SMAD3-205ENST00000558428 ADGRF5Q8IZF2 1346 aa18.01■□□□□ 0.47
SMAD3-205ENST00000558428 FBXO41Q8TF61 875 aa18.01■□□□□ 0.47
SMAD3-205ENST00000558428 PIK3R4Q99570 1358 aa18.01■□□□□ 0.47
SMAD3-205ENST00000558428 NKTRP30414 1462 aaKnown RBP18■□□□□ 0.47
SMAD3-205ENST00000558428 ALKQ9UM73 1620 aa17.99■□□□□ 0.47
SMAD3-205ENST00000558428 SETD1AO15047 1707 aaKnown RBP17.98■□□□□ 0.47
SMAD3-205ENST00000558428 PROSER2Q86WR7 435 aaPredicted RBP17.98■□□□□ 0.47
SMAD3-205ENST00000558428 METP08581 1390 aa17.98■□□□□ 0.47
SMAD3-205ENST00000558428 XIRP1Q702N8 1843 aaKnown RBP17.98■□□□□ 0.47
SMAD3-205ENST00000558428 PTPRUQ92729 1446 aa17.98■□□□□ 0.47
SMAD3-205ENST00000558428 MYOM2P54296 1465 aa17.97■□□□□ 0.47
SMAD3-205ENST00000558428 AMOTL2Q9Y2J4 779 aa17.97■□□□□ 0.47
SMAD3-205ENST00000558428 ILDR1Q86SU0 546 aaPredicted RBP17.96■□□□□ 0.47
SMAD3-205ENST00000558428 PIK3C2GO75747 1445 aa17.96■□□□□ 0.47
SMAD3-205ENST00000558428 TMEM94Q12767 1356 aa17.95■□□□□ 0.46
SMAD3-205ENST00000558428 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
SMAD3-205ENST00000558428 XRN1Q8IZH2 1706 aaKnown RBP17.95■□□□□ 0.46
SMAD3-205ENST00000558428 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
SMAD3-205ENST00000558428 RBM33Q96EV2 1170 aaKnown RBP17.94■□□□□ 0.46
SMAD3-205ENST00000558428 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
SMAD3-205ENST00000558428 KDM2AQ9Y2K7 1162 aa17.94■□□□□ 0.46
SMAD3-205ENST00000558428 NRXN1Q9ULB1 1477 aa17.94■□□□□ 0.46
SMAD3-205ENST00000558428 TOM1O60784 492 aa17.91■□□□□ 0.46
SMAD3-205ENST00000558428 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
SMAD3-205ENST00000558428 STAC3Q96MF2 364 aa17.91■□□□□ 0.46
SMAD3-205ENST00000558428 LAMC1P11047 1609 aa17.9■□□□□ 0.46
SMAD3-205ENST00000558428 C14orf93Q9H972 538 aaKnown RBP17.89■□□□□ 0.45
SMAD3-205ENST00000558428 CFAP70Q5T0N1 1121 aa17.88■□□□□ 0.45
SMAD3-205ENST00000558428 C14orf37Q86TY3 774 aa17.88■□□□□ 0.45
SMAD3-205ENST00000558428 ASXL1Q8IXJ9 1541 aa17.88■□□□□ 0.45
SMAD3-205ENST00000558428 TMEM132EQ6IEE7 984 aa17.87■□□□□ 0.45
SMAD3-205ENST00000558428 MSH6P52701 1360 aa17.87■□□□□ 0.45
SMAD3-205ENST00000558428 NCOA3Q9Y6Q9 1424 aa17.87■□□□□ 0.45
SMAD3-205ENST00000558428 SCAF1Q9H7N4 1312 aaKnown RBP17.86■□□□□ 0.45
SMAD3-205ENST00000558428 PTCH1Q13635 1447 aa17.86■□□□□ 0.45
SMAD3-205ENST00000558428 PIP4K2BP78356 416 aa17.85■□□□□ 0.45
SMAD3-205ENST00000558428 STK26Q9P289 416 aa17.85■□□□□ 0.45
SMAD3-205ENST00000558428 PRAG1Q86YV5 1406 aa17.84■□□□□ 0.45
SMAD3-205ENST00000558428 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
SMAD3-205ENST00000558428 ROBO2Q9HCK4 1378 aa17.84■□□□□ 0.45
SMAD3-205ENST00000558428 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
SMAD3-205ENST00000558428 KNDC1Q76NI1 1749 aa17.84■□□□□ 0.45
SMAD3-205ENST00000558428 YTHDC2Q9H6S0 1430 aaKnown RBP17.83■□□□□ 0.45
SMAD3-205ENST00000558428 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.83■□□□□ 0.44
SMAD3-205ENST00000558428 C19orf44Q9H6X5 657 aa17.82■□□□□ 0.44
SMAD3-205ENST00000558428 ABCC11Q96J66 1382 aa17.81■□□□□ 0.44
SMAD3-205ENST00000558428 TECPR2O15040 1411 aa17.81■□□□□ 0.44
SMAD3-205ENST00000558428 ADGRB1O14514 1584 aa17.8■□□□□ 0.44
SMAD3-205ENST00000558428 NALCNQ8IZF0 1738 aa17.8■□□□□ 0.44
SMAD3-205ENST00000558428 ADGRL3Q9HAR2 1447 aa17.8■□□□□ 0.44
SMAD3-205ENST00000558428 KIAA1210Q9ULL0 1709 aa17.79■□□□□ 0.44
SMAD3-205ENST00000558428 ATF3P18847 181 aa17.79■□□□□ 0.44
SMAD3-205ENST00000558428 TONSLQ96HA7 1378 aa17.79■□□□□ 0.44
SMAD3-205ENST00000558428 CADPS2Q86UW7 1296 aa17.78■□□□□ 0.44
SMAD3-205ENST00000558428 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
SMAD3-205ENST00000558428 DCCP43146 1447 aa17.77■□□□□ 0.44
SMAD3-205ENST00000558428 SLAIN2Q9P270 581 aa17.76■□□□□ 0.43
SMAD3-205ENST00000558428 FAM135BQ49AJ0 1406 aa17.75■□□□□ 0.43
SMAD3-205ENST00000558428 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
SMAD3-205ENST00000558428 PLEKHH1Q9ULM0 1364 aa17.75■□□□□ 0.43
SMAD3-205ENST00000558428 CLSPNQ9HAW4 1339 aa17.74■□□□□ 0.43
SMAD3-205ENST00000558428 DLC1Q96QB1 1528 aa17.74■□□□□ 0.43
SMAD3-205ENST00000558428 SIRT1Q96EB6 747 aa17.74■□□□□ 0.43
SMAD3-205ENST00000558428 ROBO1Q9Y6N7 1651 aa17.74■□□□□ 0.43
SMAD3-205ENST00000558428 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms