RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 PTGDRQ13258 359 aa10□□□□□ -0.81
HNRNPC-233ENST00000557768 PADI6Q6TGC4 694 aa10□□□□□ -0.81
HNRNPC-233ENST00000557768 ARHGEF11O15085 1522 aa9.99□□□□□ -0.81
HNRNPC-233ENST00000557768 TULP1O00294 542 aaPredicted RBP9.99□□□□□ -0.81
HNRNPC-233ENST00000557768 DNMBPQ6XZF7 1577 aa9.99□□□□□ -0.81
HNRNPC-233ENST00000557768 TARBP1Q13395 1621 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-233ENST00000557768 SMAPO00193 183 aa9.98□□□□□ -0.81
HNRNPC-233ENST00000557768 C3orf80F5H4A9 247 aa9.97□□□□□ -0.81
HNRNPC-233ENST00000557768 FCHSD2O94868 740 aa9.97□□□□□ -0.81
HNRNPC-233ENST00000557768 WNT2BQ93097 391 aa9.97□□□□□ -0.81
HNRNPC-233ENST00000557768 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
HNRNPC-233ENST00000557768 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
HNRNPC-233ENST00000557768 NBPF26B4DH59 902 aa9.96□□□□□ -0.82
HNRNPC-233ENST00000557768 LAPTM4BQ86VI4 370 aa9.96□□□□□ -0.82
HNRNPC-233ENST00000557768 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-233ENST00000557768 FAM98CQ17RN3 349 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-233ENST00000557768 NUDT18Q6ZVK8 323 aa9.95□□□□□ -0.82
HNRNPC-233ENST00000557768 TATDN2Q93075 761 aa9.95□□□□□ -0.82
HNRNPC-233ENST00000557768 AQRO60306 1485 aaKnown RBP eCLIP9.94□□□□□ -0.826e-12■■■■■ 27.1
HNRNPC-233ENST00000557768 PTPN5P54829 565 aa9.94□□□□□ -0.82
HNRNPC-233ENST00000557768 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.94□□□□□ -0.82
HNRNPC-233ENST00000557768 GPIHBP1Q8IV16 184 aa9.94□□□□□ -0.82
HNRNPC-233ENST00000557768 ANKK1Q8NFD2 765 aa9.94□□□□□ -0.82
HNRNPC-233ENST00000557768 ZFRQ96KR1 1074 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-233ENST00000557768 GPR37O15354 613 aa9.93□□□□□ -0.82
HNRNPC-233ENST00000557768 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
HNRNPC-233ENST00000557768 TTC13Q8NBP0 860 aa9.93□□□□□ -0.82
HNRNPC-233ENST00000557768 THSD4Q6ZMP0 1018 aa9.92□□□□□ -0.82
HNRNPC-233ENST00000557768 HCSTQ9UBK5 93 aa9.92□□□□□ -0.82
HNRNPC-233ENST00000557768 HIC1Q14526 733 aa9.91□□□□□ -0.82
HNRNPC-233ENST00000557768 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
HNRNPC-233ENST00000557768 CYB5RLQ6IPT4 315 aa9.91□□□□□ -0.82
HNRNPC-233ENST00000557768 POLA1P09884 1462 aaPredicted RBP9.91□□□□□ -0.82
HNRNPC-233ENST00000557768 BCAMP50895 628 aa9.9□□□□□ -0.82
HNRNPC-233ENST00000557768 GNPATO15228 680 aa9.89□□□□□ -0.83
HNRNPC-233ENST00000557768 FECHP22830 423 aa9.89□□□□□ -0.83
HNRNPC-233ENST00000557768 ARAP1Q96P48 1450 aa9.89□□□□□ -0.83
HNRNPC-233ENST00000557768 RAD54L2Q9Y4B4 1467 aa9.89□□□□□ -0.83
HNRNPC-233ENST00000557768 SOWAHBA6NEL2 793 aa9.87□□□□□ -0.83
HNRNPC-233ENST00000557768 SAMD7Q7Z3H4 446 aa9.87□□□□□ -0.83
HNRNPC-233ENST00000557768 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
HNRNPC-233ENST00000557768 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.87□□□□□ -0.83
HNRNPC-233ENST00000557768 ADGRG1Q9Y653 693 aa9.87□□□□□ -0.83
HNRNPC-233ENST00000557768 EYA1Q99502 592 aa9.86□□□□□ -0.83
HNRNPC-233ENST00000557768 TDRD9Q8NDG6 1382 aaKnown RBP9.86□□□□□ -0.83
HNRNPC-233ENST00000557768 SOGA1O94964 1423 aa9.85□□□□□ -0.83
HNRNPC-233ENST00000557768 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
HNRNPC-233ENST00000557768 RBM46Q8TBY0 533 aaKnown RBP9.85□□□□□ -0.83
HNRNPC-233ENST00000557768 FGD5Q6ZNL6 1462 aa9.85□□□□□ -0.83
HNRNPC-233ENST00000557768 RNF40O75150 1001 aa9.84□□□□□ -0.83
HNRNPC-233ENST00000557768 WDR97A6NE52 1622 aa9.84□□□□□ -0.83
HNRNPC-233ENST00000557768 SNAPC4Q5SXM2 1469 aa9.84□□□□□ -0.83
HNRNPC-233ENST00000557768 PBRM1Q86U86 1689 aa9.83□□□□□ -0.84
HNRNPC-233ENST00000557768 CLASP1Q7Z460 1538 aa9.83□□□□□ -0.84
HNRNPC-233ENST00000557768 HPS5Q9UPZ3 1129 aa9.83□□□□□ -0.84
HNRNPC-233ENST00000557768 CUX1P39880 1505 aa9.82□□□□□ -0.84
HNRNPC-233ENST00000557768 SWT1Q5T5J6 900 aaKnown RBP9.82□□□□□ -0.84
HNRNPC-233ENST00000557768 WBP1LQ9NX94 342 aa9.82□□□□□ -0.84
HNRNPC-233ENST00000557768 SYNJ1O43426 1573 aa9.81□□□□□ -0.84
HNRNPC-233ENST00000557768 OATP04181 439 aa9.81□□□□□ -0.84
HNRNPC-233ENST00000557768 RCCD1A6NED2 376 aa9.8□□□□□ -0.84
HNRNPC-233ENST00000557768 DNAJB2P25686 324 aa9.8□□□□□ -0.84
HNRNPC-233ENST00000557768 ZC3H15Q8WU90 426 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-233ENST00000557768 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-233ENST00000557768 PPP4CP60510 307 aa9.79□□□□□ -0.84
HNRNPC-233ENST00000557768 PXYLP1Q8TE99 480 aa9.79□□□□□ -0.84
HNRNPC-233ENST00000557768 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-233ENST00000557768 METTL3Q86U44 580 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-233ENST00000557768 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-233ENST00000557768 GRIN2BQ13224 1484 aa9.78□□□□□ -0.84
HNRNPC-233ENST00000557768 SLC4A3P48751 1232 aa9.76□□□□□ -0.85
HNRNPC-233ENST00000557768 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
HNRNPC-233ENST00000557768 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
HNRNPC-233ENST00000557768 NLRP7Q8WX94 980 aa9.76□□□□□ -0.85
HNRNPC-233ENST00000557768 TMEM134Q9H6X4 195 aa9.76□□□□□ -0.85
HNRNPC-233ENST00000557768 SYNJ2O15056 1496 aa9.76□□□□□ -0.85
HNRNPC-233ENST00000557768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-233ENST00000557768 ZMYND10O75800 440 aa9.75□□□□□ -0.85
HNRNPC-233ENST00000557768 ABCA5Q8WWZ7 1642 aa9.74□□□□□ -0.85
HNRNPC-233ENST00000557768 KRI1Q8N9T8 703 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-233ENST00000557768 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
HNRNPC-233ENST00000557768 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
HNRNPC-233ENST00000557768 IRF6O14896 467 aa9.73□□□□□ -0.85
HNRNPC-233ENST00000557768 GTF3C3Q9Y5Q9 886 aa9.73□□□□□ -0.85
HNRNPC-233ENST00000557768 BARGINQ6ZT62 677 aa9.72□□□□□ -0.85
HNRNPC-233ENST00000557768 NYAP1Q6ZVC0 841 aa9.72□□□□□ -0.85
HNRNPC-233ENST00000557768 PHOX2BQ99453 314 aa9.72□□□□□ -0.85
HNRNPC-233ENST00000557768 MINK1Q8N4C8 1332 aaPredicted RBP9.72□□□□□ -0.85
HNRNPC-233ENST00000557768 TIMELESSQ9UNS1 1208 aa9.71□□□□□ -0.86
HNRNPC-233ENST00000557768 CCDC102AQ96A19 550 aa9.7□□□□□ -0.86
HNRNPC-233ENST00000557768 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
HNRNPC-233ENST00000557768 ERCC6L2Q5T890 1561 aa9.7□□□□□ -0.86
HNRNPC-233ENST00000557768 APLP1P51693 650 aa9.69□□□□□ -0.86
HNRNPC-233ENST00000557768 NECTIN2Q92692 538 aa9.69□□□□□ -0.86
HNRNPC-233ENST00000557768 ADAMTS12P58397 1594 aa9.67□□□□□ -0.86
HNRNPC-233ENST00000557768 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
HNRNPC-233ENST00000557768 DAXXQ9UER7 740 aaPredicted RBP9.67□□□□□ -0.86
HNRNPC-233ENST00000557768 BIVM-ERCC5R4GMW8 1640 aa9.67□□□□□ -0.86
HNRNPC-233ENST00000557768 GRIN2AQ12879 1464 aa9.66□□□□□ -0.86
HNRNPC-233ENST00000557768 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms