RNA–Protein interactions for RNA: ENST00000557135.5

WARS-238, Transcript of tryptophanyl-tRNA synthetase, human

APPRIS P1 TSL 1 (best) BASIC

Gene WARS, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WARS-238	ENST00000557135	IDI1	Q13907	227 aa		13.78	□□□□□ -0.2
WARS-238	ENST00000557135	CFAP70	Q5T0N1	1121 aa		13.77	□□□□□ -0.21
WARS-238	ENST00000557135	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.76	□□□□□ -0.21
WARS-238	ENST00000557135	CENPB	P07199	599 aa	Predicted RBP	13.76	□□□□□ -0.21
WARS-238	ENST00000557135	PPP6R1	Q9UPN7	881 aa		13.76	□□□□□ -0.21
WARS-238	ENST00000557135	ERVK-7	P63135	1459 aa		13.76	□□□□□ -0.21
WARS-238	ENST00000557135	NRXN1	Q9ULB1	1477 aa		13.76	□□□□□ -0.21
WARS-238	ENST00000557135	TESK2	Q96S53	571 aa		13.76	□□□□□ -0.21
WARS-238	ENST00000557135	PPL	O60437	1756 aa		13.76	□□□□□ -0.21
WARS-238	ENST00000557135	KIAA1210	Q9ULL0	1709 aa		13.75	□□□□□ -0.21
WARS-238	ENST00000557135	IQGAP1	P46940	1657 aa		13.75	□□□□□ -0.21
WARS-238	ENST00000557135	CCER2	I3L3R5	266 aa		13.75	□□□□□ -0.21
WARS-238	ENST00000557135	SLC52A1	Q9NWF4	448 aa		13.75	□□□□□ -0.21
WARS-238	ENST00000557135	RPGRIP1L	Q68CZ1	1315 aa		13.74	□□□□□ -0.21
WARS-238	ENST00000557135	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.74	□□□□□ -0.21
WARS-238	ENST00000557135	SCAF11	Q99590	1463 aa	Known RBP	13.74	□□□□□ -0.21
WARS-238	ENST00000557135	DNAJC5	Q9H3Z4	198 aa		13.73	□□□□□ -0.21
WARS-238	ENST00000557135	DISP3	Q9P2K9	1392 aa		13.73	□□□□□ -0.21
WARS-238	ENST00000557135	NEXMIF	Q5QGS0	1516 aa		13.73	□□□□□ -0.21
WARS-238	ENST00000557135	PIK3C2G	O75747	1445 aa		13.72	□□□□□ -0.21
WARS-238	ENST00000557135	TMEM131L	A2VDJ0	1609 aa		13.71	□□□□□ -0.21
WARS-238	ENST00000557135	MYO5B	Q9ULV0	1848 aa		13.71	□□□□□ -0.22
WARS-238	ENST00000557135	ESF1	Q9H501	851 aa	Known RBP	13.7	□□□□□ -0.22
WARS-238	ENST00000557135	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.7	□□□□□ -0.22
WARS-238	ENST00000557135	SPATA31D1	Q6ZQQ2	1576 aa		13.69	□□□□□ -0.22
WARS-238	ENST00000557135	ZMYM3	Q14202	1370 aa		13.69	□□□□□ -0.22
WARS-238	ENST00000557135	TMF1	P82094	1093 aa		13.69	□□□□□ -0.22
WARS-238	ENST00000557135	C14orf93	Q9H972	538 aa	Known RBP	13.69	□□□□□ -0.22
WARS-238	ENST00000557135	CNGB1	Q14028	1251 aa	Predicted RBP	13.68	□□□□□ -0.22
WARS-238	ENST00000557135	SENP3	Q9H4L4	574 aa	Predicted RBP	13.68	□□□□□ -0.22
WARS-238	ENST00000557135	VGF	O15240	615 aa	Predicted RBP	13.67	□□□□□ -0.22
WARS-238	ENST00000557135	SETBP1	Q9Y6X0	1596 aa		13.67	□□□□□ -0.22
WARS-238	ENST00000557135	EIF3A	Q14152	1382 aa	Known RBP	13.67	□□□□□ -0.22
WARS-238	ENST00000557135	TMEM132E	Q6IEE7	984 aa		13.67	□□□□□ -0.22
WARS-238	ENST00000557135	STAG3	Q9UJ98	1225 aa		13.67	□□□□□ -0.22
WARS-238	ENST00000557135	ADGRB1	O14514	1584 aa		13.66	□□□□□ -0.22
WARS-238	ENST00000557135	CCDC184	Q52MB2	194 aa		13.66	□□□□□ -0.22
WARS-238	ENST00000557135	ZFYVE9	O95405	1425 aa		13.65	□□□□□ -0.23
WARS-238	ENST00000557135	TRAK1	Q9UPV9	953 aa		13.64	□□□□□ -0.23
WARS-238	ENST00000557135	A2ML1	A8K2U0	1454 aa		13.64	□□□□□ -0.23
WARS-238	ENST00000557135	TNR	Q92752	1358 aa		13.61	□□□□□ -0.23
WARS-238	ENST00000557135	MYO3A	Q8NEV4	1616 aa		13.61	□□□□□ -0.23
WARS-238	ENST00000557135	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.61	□□□□□ -0.23
WARS-238	ENST00000557135	CEBPA	P49715	358 aa	Predicted RBP	13.6	□□□□□ -0.23
WARS-238	ENST00000557135	PANK3	Q9H999	370 aa		13.6	□□□□□ -0.23
WARS-238	ENST00000557135	ASXL1	Q8IXJ9	1541 aa		13.6	□□□□□ -0.23
WARS-238	ENST00000557135	RIMS2	Q9UQ26	1411 aa		13.6	□□□□□ -0.23
WARS-238	ENST00000557135	SCAF1	Q9H7N4	1312 aa	Known RBP	13.59	□□□□□ -0.23
WARS-238	ENST00000557135	PER1	O15534	1290 aa	Predicted RBP	13.59	□□□□□ -0.23
WARS-238	ENST00000557135	MRS2	Q9HD23	443 aa		13.59	□□□□□ -0.23
WARS-238	ENST00000557135	CDCA8	Q53HL2	280 aa		13.59	□□□□□ -0.23
WARS-238	ENST00000557135	PLPPR3	Q6T4P5	718 aa		13.58	□□□□□ -0.24
WARS-238	ENST00000557135	STK26	Q9P289	416 aa		13.57	□□□□□ -0.24
WARS-238	ENST00000557135	SBNO2	Q9Y2G9	1366 aa		13.57	□□□□□ -0.24
WARS-238	ENST00000557135	QRICH2	Q9H0J4	1663 aa		13.57	□□□□□ -0.24
WARS-238	ENST00000557135	KDM5A	P29375	1690 aa	Known RBP	13.56	□□□□□ -0.24
WARS-238	ENST00000557135	ALK	Q9UM73	1620 aa		13.56	□□□□□ -0.24
WARS-238	ENST00000557135	MYOM1	P52179	1685 aa		13.56	□□□□□ -0.24
WARS-238	ENST00000557135	FER1L4	A9Z1Z3	1794 aa		13.56	□□□□□ -0.24
WARS-238	ENST00000557135	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.56	□□□□□ -0.24
WARS-238	ENST00000557135	C3	P01024	1663 aa		13.55	□□□□□ -0.24
WARS-238	ENST00000557135	KTN1	Q86UP2	1357 aa	Known RBP	13.54	□□□□□ -0.24
WARS-238	ENST00000557135	SLC24A1	O60721	1099 aa		13.54	□□□□□ -0.24
WARS-238	ENST00000557135	FAM9B	Q8IZU0	186 aa		13.54	□□□□□ -0.24
WARS-238	ENST00000557135	PTPRM	P28827	1452 aa		13.53	□□□□□ -0.24
WARS-238	ENST00000557135	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
WARS-238	ENST00000557135	RALBP1	Q15311	655 aa		13.53	□□□□□ -0.24
WARS-238	ENST00000557135	CC2D1B	Q5T0F9	858 aa	Known RBP	13.53	□□□□□ -0.24
WARS-238	ENST00000557135	GTF3C3	Q9Y5Q9	886 aa		13.53	□□□□□ -0.24
WARS-238	ENST00000557135	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.53	□□□□□ -0.24
WARS-238	ENST00000557135	UBR1	Q8IWV7	1749 aa		13.53	□□□□□ -0.24
WARS-238	ENST00000557135	PARD3	Q8TEW0	1356 aa		13.53	□□□□□ -0.24
WARS-238	ENST00000557135	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.52	□□□□□ -0.25
WARS-238	ENST00000557135	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
WARS-238	ENST00000557135	TMEM2	Q9UHN6	1383 aa		13.51	□□□□□ -0.25
WARS-238	ENST00000557135	NRXN3	Q9Y4C0	1643 aa		13.51	□□□□□ -0.25
WARS-238	ENST00000557135	NLRP1	Q9C000	1473 aa		13.51	□□□□□ -0.25
WARS-238	ENST00000557135	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
WARS-238	ENST00000557135	SETD1A	O15047	1707 aa	Known RBP	13.5	□□□□□ -0.25
WARS-238	ENST00000557135	TULP4	Q9NRJ4	1543 aa		13.5	□□□□□ -0.25
WARS-238	ENST00000557135	PRAM1	Q96QH2	718 aa		13.5	□□□□□ -0.25
WARS-238	ENST00000557135	KNSTRN	Q9Y448	316 aa		13.49	□□□□□ -0.25
WARS-238	ENST00000557135	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.48	□□□□□ -0.25
WARS-238	ENST00000557135	TMC1	Q8TDI8	760 aa		13.48	□□□□□ -0.25
WARS-238	ENST00000557135	HDGF	P51858	240 aa	Known RBP	13.48	□□□□□ -0.25
WARS-238	ENST00000557135	EVC2	Q86UK5	1308 aa		13.48	□□□□□ -0.25
WARS-238	ENST00000557135	POGK	Q9P215	609 aa		13.48	□□□□□ -0.25
WARS-238	ENST00000557135	BRD4	O60885	1362 aa	Predicted RBP	13.47	□□□□□ -0.25
WARS-238	ENST00000557135	MET	P08581	1390 aa		13.47	□□□□□ -0.25
WARS-238	ENST00000557135	LRPPRC	P42704	1394 aa	Known RBP	13.47	□□□□□ -0.25
WARS-238	ENST00000557135	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.47	□□□□□ -0.25
WARS-238	ENST00000557135	LTK	P29376	864 aa		13.47	□□□□□ -0.25
WARS-238	ENST00000557135	BCAN	Q96GW7	911 aa		13.47	□□□□□ -0.25
WARS-238	ENST00000557135	CARD14	Q9BXL6	1004 aa		13.47	□□□□□ -0.25
WARS-238	ENST00000557135	SLC12A5	Q9H2X9	1139 aa		13.47	□□□□□ -0.25
WARS-238	ENST00000557135	RIMS1	Q86UR5	1692 aa	Known RBP	13.47	□□□□□ -0.25
WARS-238	ENST00000557135	CABP2	Q9NPB3	220 aa		13.46	□□□□□ -0.25
WARS-238	ENST00000557135	NLRP13	Q86W25	1043 aa		13.46	□□□□□ -0.26
WARS-238	ENST00000557135	PNISR	Q8TF01	805 aa	Known RBP	13.46	□□□□□ -0.26
WARS-238	ENST00000557135	WAPL	Q7Z5K2	1190 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms