RNA–Protein interactions for RNA: ENST00000556112.5

NUMB-220, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-220ENST00000556112 KCTD12Q96CX2 325 aaKnown RBP7.55□□□□□ -1.2
NUMB-220ENST00000556112 GNPATO15228 680 aa7.54□□□□□ -1.2
NUMB-220ENST00000556112 GPR37O15354 613 aa7.54□□□□□ -1.2
NUMB-220ENST00000556112 FAM98CQ17RN3 349 aaKnown RBP7.54□□□□□ -1.2
NUMB-220ENST00000556112 WNT2BQ93097 391 aa7.54□□□□□ -1.2
NUMB-220ENST00000556112 CEP164Q9UPV0 1460 aa7.54□□□□□ -1.2
NUMB-220ENST00000556112 FECHP22830 423 aa7.53□□□□□ -1.2
NUMB-220ENST00000556112 TPRNQ4KMQ1 711 aa7.53□□□□□ -1.2
NUMB-220ENST00000556112 ZFRQ96KR1 1074 aaKnown RBP7.53□□□□□ -1.2
NUMB-220ENST00000556112 MRC2Q9UBG0 1479 aa7.53□□□□□ -1.2
NUMB-220ENST00000556112 FAM161AQ3B820 660 aa7.52□□□□□ -1.21
NUMB-220ENST00000556112 KIF21AQ7Z4S6 1674 aa7.51□□□□□ -1.21
NUMB-220ENST00000556112 ANKK1Q8NFD2 765 aa7.51□□□□□ -1.21
NUMB-220ENST00000556112 ADGRG1Q9Y653 693 aa7.51□□□□□ -1.21
NUMB-220ENST00000556112 PRKCSHP14314 528 aaPredicted RBP7.5□□□□□ -1.21
NUMB-220ENST00000556112 EYA1Q99502 592 aa7.5□□□□□ -1.21
NUMB-220ENST00000556112 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
NUMB-220ENST00000556112 HDGFP51858 240 aaKnown RBP7.49□□□□□ -1.21
NUMB-220ENST00000556112 PTPN5P54829 565 aa7.49□□□□□ -1.21
NUMB-220ENST00000556112 RBM46Q8TBY0 533 aaKnown RBP7.49□□□□□ -1.21
NUMB-220ENST00000556112 WDR62O43379 1518 aa7.48□□□□□ -1.21
NUMB-220ENST00000556112 OATP04181 439 aa7.48□□□□□ -1.21
NUMB-220ENST00000556112 BCAMP50895 628 aa7.48□□□□□ -1.21
NUMB-220ENST00000556112 THSD4Q6ZMP0 1018 aa7.48□□□□□ -1.21
NUMB-220ENST00000556112 LRCH3Q96II8 777 aa7.48□□□□□ -1.21
NUMB-220ENST00000556112 ABCC8Q09428 1581 aa7.47□□□□□ -1.21
NUMB-220ENST00000556112 SOWAHBA6NEL2 793 aa7.47□□□□□ -1.21
NUMB-220ENST00000556112 SAMD7Q7Z3H4 446 aa7.47□□□□□ -1.21
NUMB-220ENST00000556112 ZC3H15Q8WU90 426 aaKnown RBP7.47□□□□□ -1.21
NUMB-220ENST00000556112 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.47□□□□□ -1.21
NUMB-220ENST00000556112 HCSTQ9UBK5 93 aa7.47□□□□□ -1.21
NUMB-220ENST00000556112 URB2Q14146 1524 aaKnown RBP7.47□□□□□ -1.21
NUMB-220ENST00000556112 RCCD1A6NED2 376 aa7.45□□□□□ -1.22
NUMB-220ENST00000556112 RNF40O75150 1001 aa7.45□□□□□ -1.22
NUMB-220ENST00000556112 DNAJB2P25686 324 aa7.45□□□□□ -1.22
NUMB-220ENST00000556112 MAP2K5Q13163 448 aa7.45□□□□□ -1.22
NUMB-220ENST00000556112 METTL3Q86U44 580 aaKnown RBP7.45□□□□□ -1.22
NUMB-220ENST00000556112 KRI1Q8N9T8 703 aaKnown RBP7.45□□□□□ -1.22
NUMB-220ENST00000556112 PXYLP1Q8TE99 480 aa7.45□□□□□ -1.22
NUMB-220ENST00000556112 ZMYND10O75800 440 aa7.44□□□□□ -1.22
NUMB-220ENST00000556112 SWT1Q5T5J6 900 aaKnown RBP7.44□□□□□ -1.22
NUMB-220ENST00000556112 MINK1Q8N4C8 1332 aaPredicted RBP7.44□□□□□ -1.22
NUMB-220ENST00000556112 TOPBP1Q92547 1522 aa7.43□□□□□ -1.22
NUMB-220ENST00000556112 IRF6O14896 467 aa7.43□□□□□ -1.22
NUMB-220ENST00000556112 TSR3Q9UJK0 312 aaKnown RBP7.43□□□□□ -1.22
NUMB-220ENST00000556112 HPS5Q9UPZ3 1129 aa7.43□□□□□ -1.22
NUMB-220ENST00000556112 PRDM2Q13029 1718 aa7.43□□□□□ -1.22
NUMB-220ENST00000556112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.42□□□□□ -1.22
NUMB-220ENST00000556112 SLC4A3P48751 1232 aa7.42□□□□□ -1.22
NUMB-220ENST00000556112 PPP4CP60510 307 aa7.42□□□□□ -1.22
NUMB-220ENST00000556112 BARGINQ6ZT62 677 aa7.42□□□□□ -1.22
NUMB-220ENST00000556112 TMEM134Q9H6X4 195 aa7.42□□□□□ -1.22
NUMB-220ENST00000556112 WBP1LQ9NX94 342 aa7.42□□□□□ -1.22
NUMB-220ENST00000556112 SLF2Q8IX21 1173 aa7.41□□□□□ -1.22
NUMB-220ENST00000556112 CCDC102AQ96A19 550 aa7.41□□□□□ -1.22
NUMB-220ENST00000556112 PHOX2BQ99453 314 aa7.41□□□□□ -1.22
NUMB-220ENST00000556112 NLRP7Q8WX94 980 aa7.4□□□□□ -1.22
NUMB-220ENST00000556112 DNMBPQ6XZF7 1577 aa7.4□□□□□ -1.22
NUMB-220ENST00000556112 IFT140Q96RY7 1462 aa7.39□□□□□ -1.23
NUMB-220ENST00000556112 SOGA1O94964 1423 aa7.39□□□□□ -1.23
NUMB-220ENST00000556112 POLA1P09884 1462 aaPredicted RBP7.37□□□□□ -1.23
NUMB-220ENST00000556112 NYAP1Q6ZVC0 841 aa7.37□□□□□ -1.23
NUMB-220ENST00000556112 NECTIN2Q92692 538 aa7.37□□□□□ -1.23
NUMB-220ENST00000556112 DAXXQ9UER7 740 aaPredicted RBP7.37□□□□□ -1.23
NUMB-220ENST00000556112 CUX1P39880 1505 aa7.37□□□□□ -1.23
NUMB-220ENST00000556112 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
NUMB-220ENST00000556112 RAD54L2Q9Y4B4 1467 aa7.36□□□□□ -1.23
NUMB-220ENST00000556112 WRNQ14191 1432 aaPredicted RBP eCLIP7.35□□□□□ -1.23
NUMB-220ENST00000556112 MDM2Q00987 491 aaPredicted RBP7.35□□□□□ -1.23
NUMB-220ENST00000556112 ZNF608Q9ULD9 1512 aaPredicted RBP7.35□□□□□ -1.23
NUMB-220ENST00000556112 AQRO60306 1485 aaKnown RBP eCLIP7.35□□□□□ -1.23
NUMB-220ENST00000556112 TDRD9Q8NDG6 1382 aaKnown RBP7.34□□□□□ -1.23
NUMB-220ENST00000556112 DDX11L8A8MPP1 907 aa7.34□□□□□ -1.23
NUMB-220ENST00000556112 RSPH4AQ5TD94 716 aa7.34□□□□□ -1.23
NUMB-220ENST00000556112 SLC24A3Q9HC58 644 aa7.34□□□□□ -1.23
NUMB-220ENST00000556112 SLC10A3P09131 477 aa7.33□□□□□ -1.24
NUMB-220ENST00000556112 APLP1P51693 650 aa7.33□□□□□ -1.24
NUMB-220ENST00000556112 SULF1Q8IWU6 871 aa7.33□□□□□ -1.24
NUMB-220ENST00000556112 RDH13Q8NBN7 331 aa7.33□□□□□ -1.24
NUMB-220ENST00000556112 AK7Q96M32 723 aa7.33□□□□□ -1.24
NUMB-220ENST00000556112 TARBP1Q13395 1621 aaKnown RBP7.32□□□□□ -1.24
NUMB-220ENST00000556112 PLA2G2EQ9NZK7 142 aa7.32□□□□□ -1.24
NUMB-220ENST00000556112 CFHP08603 1231 aa7.31□□□□□ -1.24
NUMB-220ENST00000556112 CLCN1P35523 988 aa7.31□□□□□ -1.24
NUMB-220ENST00000556112 PRR14Q9BWN1 585 aa7.31□□□□□ -1.24
NUMB-220ENST00000556112 GPCPD1Q9NPB8 672 aa7.31□□□□□ -1.24
NUMB-220ENST00000556112 TRIM66O15016 1216 aa7.3□□□□□ -1.24
NUMB-220ENST00000556112 TTLL12Q14166 644 aaPredicted RBP7.3□□□□□ -1.24
NUMB-220ENST00000556112 KMT5BQ4FZB7 885 aa7.3□□□□□ -1.24
NUMB-220ENST00000556112 AMHR2Q16671 573 aa7.29□□□□□ -1.24
NUMB-220ENST00000556112 CHMP7Q8WUX9 453 aaPredicted RBP7.29□□□□□ -1.24
NUMB-220ENST00000556112 TOP2BQ02880 1626 aa7.29□□□□□ -1.24
NUMB-220ENST00000556112 ABCA10Q8WWZ4 1543 aa7.28□□□□□ -1.24
NUMB-220ENST00000556112 MTRQ99707 1265 aa7.28□□□□□ -1.24
NUMB-220ENST00000556112 REPIN1Q9BWE0 567 aaKnown RBP7.28□□□□□ -1.24
NUMB-220ENST00000556112 GAPVD1Q14C86 1478 aa7.28□□□□□ -1.24
NUMB-220ENST00000556112 SYNJ1O43426 1573 aa7.28□□□□□ -1.24
NUMB-220ENST00000556112 ACTN4O43707 911 aaKnown RBP7.27□□□□□ -1.25
NUMB-220ENST00000556112 ITGBL1O95965 494 aaPredicted RBP7.27□□□□□ -1.25
NUMB-220ENST00000556112 GCGRP47871 477 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms