RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 TMEM2Q9UHN6 1383 aa25.33■■□□□ 1.65
PSEN1-212ENST00000555254 UBAP1LF5GYI3 381 aa25.31■■□□□ 1.64
PSEN1-212ENST00000555254 SENP3Q9H4L4 574 aaPredicted RBP25.31■■□□□ 1.64
PSEN1-212ENST00000555254 NPHP4O75161 1426 aaPredicted RBP25.3■■□□□ 1.64
PSEN1-212ENST00000555254 ADGRB3O60242 1522 aa25.3■■□□□ 1.64
PSEN1-212ENST00000555254 BCANQ96GW7 911 aa25.29■■□□□ 1.64
PSEN1-212ENST00000555254 SCAF11Q99590 1463 aaKnown RBP25.28■■□□□ 1.64
PSEN1-212ENST00000555254 ARHGAP23Q9P227 1491 aa25.28■■□□□ 1.64
PSEN1-212ENST00000555254 SLIT1O75093 1534 aa25.27■■□□□ 1.64
PSEN1-212ENST00000555254 PPP1R15AO75807 674 aaPredicted RBP25.27■■□□□ 1.64
PSEN1-212ENST00000555254 HDGFP51858 240 aaKnown RBP25.27■■□□□ 1.64
PSEN1-212ENST00000555254 ZNF326Q5BKZ1 582 aaKnown RBP25.27■■□□□ 1.64
PSEN1-212ENST00000555254 NUTM2DQ5VT03 806 aaPredicted RBP25.27■■□□□ 1.64
PSEN1-212ENST00000555254 ZNF335Q9H4Z2 1342 aaPredicted RBP25.27■■□□□ 1.64
PSEN1-212ENST00000555254 NEURL4Q96JN8 1562 aa25.27■■□□□ 1.64
PSEN1-212ENST00000555254 MED14O60244 1454 aa25.24■■□□□ 1.63
PSEN1-212ENST00000555254 POLR1AO95602 1720 aaPredicted RBP25.23■■□□□ 1.63
PSEN1-212ENST00000555254 SPHKAPQ2M3C7 1700 aa25.23■■□□□ 1.63
PSEN1-212ENST00000555254 RIMS2Q9UQ26 1411 aa25.23■■□□□ 1.63
PSEN1-212ENST00000555254 TMEM131LA2VDJ0 1609 aa25.22■■□□□ 1.63
PSEN1-212ENST00000555254 KDM5AP29375 1690 aaKnown RBP25.21■■□□□ 1.63
PSEN1-212ENST00000555254 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.21■■□□□ 1.63
PSEN1-212ENST00000555254 TRPM2O94759 1503 aa25.21■■□□□ 1.63
PSEN1-212ENST00000555254 CCDC144AA2RUR9 1427 aa25.2■■□□□ 1.63
PSEN1-212ENST00000555254 SLC26A8Q96RN1 970 aa25.19■■□□□ 1.62
PSEN1-212ENST00000555254 CLTCL1P53675 1640 aa25.17■■□□□ 1.62
PSEN1-212ENST00000555254 HSPA1LP34931 641 aa25.17■■□□□ 1.62
PSEN1-212ENST00000555254 L3MBTL2Q969R5 705 aa25.17■■□□□ 1.62
PSEN1-212ENST00000555254 ZFYVE9O95405 1425 aa25.17■■□□□ 1.62
PSEN1-212ENST00000555254 IQGAP1P46940 1657 aa25.17■■□□□ 1.62
PSEN1-212ENST00000555254 RGL3Q3MIN7 710 aa25.13■■□□□ 1.61
PSEN1-212ENST00000555254 MYO5BQ9ULV0 1848 aa25.13■■□□□ 1.61
PSEN1-212ENST00000555254 PLEKHG1Q9ULL1 1385 aa25.11■■□□□ 1.61
PSEN1-212ENST00000555254 PHF23Q9BUL5 403 aaPredicted RBP25.05■■□□□ 1.6
PSEN1-212ENST00000555254 RPGRIP1LQ68CZ1 1315 aa25.05■■□□□ 1.6
PSEN1-212ENST00000555254 VGFO15240 615 aaPredicted RBP25.04■■□□□ 1.6
PSEN1-212ENST00000555254 TBX22Q9Y458 520 aa25.04■■□□□ 1.6
PSEN1-212ENST00000555254 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
PSEN1-212ENST00000555254 KIF1BO60333 1816 aa25.02■■□□□ 1.6
PSEN1-212ENST00000555254 KCNA6P17658 529 aa25.02■■□□□ 1.6
PSEN1-212ENST00000555254 ZNF316A6NFI3 1004 aaPredicted RBP25.01■■□□□ 1.59
PSEN1-212ENST00000555254 PIP4K2BP78356 416 aa25.01■■□□□ 1.59
PSEN1-212ENST00000555254 DCAF11Q8TEB1 546 aa25.01■■□□□ 1.59
PSEN1-212ENST00000555254 KDM2AQ9Y2K7 1162 aa25■■□□□ 1.59
PSEN1-212ENST00000555254 CPS1P31327 1500 aa25■■□□□ 1.59
PSEN1-212ENST00000555254 NEXMIFQ5QGS0 1516 aa24.98■■□□□ 1.59
PSEN1-212ENST00000555254 SPATA31E1Q6ZUB1 1445 aa24.98■■□□□ 1.59
PSEN1-212ENST00000555254 ADAMTS13Q76LX8 1427 aa24.97■■□□□ 1.59
PSEN1-212ENST00000555254 PROSER2Q86WR7 435 aaPredicted RBP24.97■■□□□ 1.59
PSEN1-212ENST00000555254 STAC3Q96MF2 364 aa24.97■■□□□ 1.59
PSEN1-212ENST00000555254 RBM33Q96EV2 1170 aaKnown RBP24.96■■□□□ 1.59
PSEN1-212ENST00000555254 LRRC7Q96NW7 1537 aa24.92■■□□□ 1.58
PSEN1-212ENST00000555254 ADGRF5Q8IZF2 1346 aa24.92■■□□□ 1.58
PSEN1-212ENST00000555254 STRCP1A6NGW2 1772 aa24.91■■□□□ 1.58
PSEN1-212ENST00000555254 NBPF8Q3BBV2 869 aa24.91■■□□□ 1.58
PSEN1-212ENST00000555254 AMOTL2Q9Y2J4 779 aa24.91■■□□□ 1.58
PSEN1-212ENST00000555254 METP08581 1390 aa24.89■■□□□ 1.57
PSEN1-212ENST00000555254 TMEM94Q12767 1356 aa24.88■■□□□ 1.57
PSEN1-212ENST00000555254 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
PSEN1-212ENST00000555254 PIK3R4Q99570 1358 aa24.87■■□□□ 1.57
PSEN1-212ENST00000555254 DIP2AQ14689 1571 aa24.87■■□□□ 1.57
PSEN1-212ENST00000555254 TOM1O60784 492 aa24.86■■□□□ 1.57
PSEN1-212ENST00000555254 RGS17Q9UGC6 210 aaPredicted RBP24.86■■□□□ 1.57
PSEN1-212ENST00000555254 ALKQ9UM73 1620 aa24.86■■□□□ 1.57
PSEN1-212ENST00000555254 C14orf37Q86TY3 774 aa24.85■■□□□ 1.57
PSEN1-212ENST00000555254 PTPRUQ92729 1446 aa24.85■■□□□ 1.57
PSEN1-212ENST00000555254 NRXN3Q9Y4C0 1643 aa24.84■■□□□ 1.57
PSEN1-212ENST00000555254 PPLO60437 1756 aa24.83■■□□□ 1.57
PSEN1-212ENST00000555254 EIF4G2P78344 907 aaKnown RBP eCLIP24.82■■□□□ 1.56
PSEN1-212ENST00000555254 NKTRP30414 1462 aaKnown RBP24.82■■□□□ 1.56
PSEN1-212ENST00000555254 NWD1Q149M9 1564 aa24.8■■□□□ 1.56
PSEN1-212ENST00000555254 PRAG1Q86YV5 1406 aa24.79■■□□□ 1.56
PSEN1-212ENST00000555254 CHD2O14647 1828 aaKnown RBP24.78■■□□□ 1.56
PSEN1-212ENST00000555254 TMEM132EQ6IEE7 984 aa24.78■■□□□ 1.56
PSEN1-212ENST00000555254 STK26Q9P289 416 aa24.78■■□□□ 1.56
PSEN1-212ENST00000555254 CFAP70Q5T0N1 1121 aa24.77■■□□□ 1.56
PSEN1-212ENST00000555254 CARD11Q9BXL7 1154 aa24.76■■□□□ 1.55
PSEN1-212ENST00000555254 RALGAPBQ86X10 1494 aa24.76■■□□□ 1.55
PSEN1-212ENST00000555254 C14orf93Q9H972 538 aaKnown RBP24.75■■□□□ 1.55
PSEN1-212ENST00000555254 PIK3C2GO75747 1445 aa24.75■■□□□ 1.55
PSEN1-212ENST00000555254 HSPA5P11021 654 aaKnown RBP24.74■■□□□ 1.55
PSEN1-212ENST00000555254 ROCK2O75116 1388 aaKnown RBP24.74■■□□□ 1.55
PSEN1-212ENST00000555254 MSH6P52701 1360 aa24.74■■□□□ 1.55
PSEN1-212ENST00000555254 IFT172Q9UG01 1749 aa24.73■■□□□ 1.55
PSEN1-212ENST00000555254 MYOM2P54296 1465 aa24.73■■□□□ 1.55
PSEN1-212ENST00000555254 C19orf44Q9H6X5 657 aa24.7■■□□□ 1.54
PSEN1-212ENST00000555254 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.54
PSEN1-212ENST00000555254 ATF3P18847 181 aa24.69■■□□□ 1.54
PSEN1-212ENST00000555254 ROBO2Q9HCK4 1378 aa24.68■■□□□ 1.54
PSEN1-212ENST00000555254 HIRIP3Q9BW71 556 aaPredicted RBP24.68■■□□□ 1.54
PSEN1-212ENST00000555254 NCOA3Q9Y6Q9 1424 aa24.68■■□□□ 1.54
PSEN1-212ENST00000555254 XIRP1Q702N8 1843 aaKnown RBP24.68■■□□□ 1.54
PSEN1-212ENST00000555254 SETD1AO15047 1707 aaKnown RBP24.67■■□□□ 1.54
PSEN1-212ENST00000555254 XRN1Q8IZH2 1706 aaKnown RBP24.67■■□□□ 1.54
PSEN1-212ENST00000555254 SLAIN2Q9P270 581 aa24.66■■□□□ 1.54
PSEN1-212ENST00000555254 LRPPRCP42704 1394 aaKnown RBP24.66■■□□□ 1.54
PSEN1-212ENST00000555254 NBPF1Q3BBV0 1214 aa24.65■■□□□ 1.54
PSEN1-212ENST00000555254 USP47Q96K76 1375 aa24.65■■□□□ 1.54
PSEN1-212ENST00000555254 DIEXFQ68CQ4 756 aaKnown RBP24.64■■□□□ 1.54
PSEN1-212ENST00000555254 WAPLQ7Z5K2 1190 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms