RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 DISP3Q9P2K9 1392 aa24.4■■□□□ 1.5
MEG3-224ENST00000554639 DIP2BQ9P265 1576 aa24.39■■□□□ 1.49
MEG3-224ENST00000554639 RPGRIP1LQ68CZ1 1315 aa24.39■■□□□ 1.49
MEG3-224ENST00000554639 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
MEG3-224ENST00000554639 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
MEG3-224ENST00000554639 MROH2AA6NES4 1674 aa24.37■■□□□ 1.49
MEG3-224ENST00000554639 PARD3Q8TEW0 1356 aa24.37■■□□□ 1.49
MEG3-224ENST00000554639 UGGT1Q9NYU2 1555 aa24.37■■□□□ 1.49
MEG3-224ENST00000554639 SETBP1Q9Y6X0 1596 aa24.37■■□□□ 1.49
MEG3-224ENST00000554639 NOS1P29475 1434 aa24.37■■□□□ 1.49
MEG3-224ENST00000554639 PER1O15534 1290 aaPredicted RBP24.36■■□□□ 1.49
MEG3-224ENST00000554639 RAPGEF3O95398 923 aa24.35■■□□□ 1.49
MEG3-224ENST00000554639 PIK3C2BO00750 1634 aa24.34■■□□□ 1.49
MEG3-224ENST00000554639 GGT6Q6P531 493 aa24.34■■□□□ 1.49
MEG3-224ENST00000554639 TMC1Q8TDI8 760 aa24.33■■□□□ 1.49
MEG3-224ENST00000554639 SYNMO15061 1565 aa24.33■■□□□ 1.49
MEG3-224ENST00000554639 REREQ9P2R6 1566 aa24.33■■□□□ 1.49
MEG3-224ENST00000554639 PPLO60437 1756 aa24.33■■□□□ 1.48
MEG3-224ENST00000554639 PNISRQ8TF01 805 aaKnown RBP24.32■■□□□ 1.48
MEG3-224ENST00000554639 MYO3AQ8NEV4 1616 aa24.31■■□□□ 1.48
MEG3-224ENST00000554639 NLRP13Q86W25 1043 aa24.31■■□□□ 1.48
MEG3-224ENST00000554639 INSRP06213 1382 aa24.3■■□□□ 1.48
MEG3-224ENST00000554639 LRPPRCP42704 1394 aaKnown RBP24.3■■□□□ 1.48
MEG3-224ENST00000554639 FKBP8Q14318 412 aa24.3■■□□□ 1.48
MEG3-224ENST00000554639 SBNO2Q9Y2G9 1366 aa24.3■■□□□ 1.48
MEG3-224ENST00000554639 ERICH6BQ5W0A0 696 aa24.3■■□□□ 1.48
MEG3-224ENST00000554639 ADGRF5Q8IZF2 1346 aa24.27■■□□□ 1.48
MEG3-224ENST00000554639 PPP6R1Q9UPN7 881 aa24.27■■□□□ 1.48
MEG3-224ENST00000554639 PIK3C2GO75747 1445 aa24.26■■□□□ 1.47
MEG3-224ENST00000554639 KDM5AP29375 1690 aaKnown RBP24.25■■□□□ 1.47
MEG3-224ENST00000554639 FAM69CQ0P6D2 419 aa24.25■■□□□ 1.47
MEG3-224ENST00000554639 PANK3Q9H999 370 aa24.25■■□□□ 1.47
MEG3-224ENST00000554639 YEATS2Q9ULM3 1422 aa24.25■■□□□ 1.47
MEG3-224ENST00000554639 AGLP35573 1532 aa24.25■■□□□ 1.47
MEG3-224ENST00000554639 SIGLEC1Q9BZZ2 1709 aa24.25■■□□□ 1.47
MEG3-224ENST00000554639 NPC1L1Q9UHC9 1359 aa24.23■■□□□ 1.47
MEG3-224ENST00000554639 SLC52A1Q9NWF4 448 aa24.23■■□□□ 1.47
MEG3-224ENST00000554639 CFAP70Q5T0N1 1121 aa24.22■■□□□ 1.47
MEG3-224ENST00000554639 C14orf93Q9H972 538 aaKnown RBP24.21■■□□□ 1.47
MEG3-224ENST00000554639 ZFYVE9O95405 1425 aa24.2■■□□□ 1.47
MEG3-224ENST00000554639 SMG6Q86US8 1419 aaKnown RBP24.2■■□□□ 1.47
MEG3-224ENST00000554639 MYOM1P52179 1685 aa24.19■■□□□ 1.46
MEG3-224ENST00000554639 VGFO15240 615 aaPredicted RBP24.17■■□□□ 1.46
MEG3-224ENST00000554639 CFAP65Q6ZU64 1925 aaKnown RBP24.17■■□□□ 1.46
MEG3-224ENST00000554639 ADGRB1O14514 1584 aa24.17■■□□□ 1.46
MEG3-224ENST00000554639 PREX1Q8TCU6 1659 aa24.16■■□□□ 1.46
MEG3-224ENST00000554639 NEXMIFQ5QGS0 1516 aa24.16■■□□□ 1.46
MEG3-224ENST00000554639 ERVK-7P63135 1459 aa24.16■■□□□ 1.46
MEG3-224ENST00000554639 ASXL1Q8IXJ9 1541 aa24.16■■□□□ 1.46
MEG3-224ENST00000554639 CHGAP10645 457 aaKnown RBP24.15■■□□□ 1.46
MEG3-224ENST00000554639 KNSTRNQ9Y448 316 aa24.15■■□□□ 1.46
MEG3-224ENST00000554639 CNGB1Q14028 1251 aaPredicted RBP24.12■■□□□ 1.45
MEG3-224ENST00000554639 CENPJQ9HC77 1338 aaPredicted RBP24.11■■□□□ 1.45
MEG3-224ENST00000554639 PUS7Q96PZ0 661 aaKnown RBP24.11■■□□□ 1.45
MEG3-224ENST00000554639 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
MEG3-224ENST00000554639 NUDCQ9Y266 331 aa24.1■■□□□ 1.45
MEG3-224ENST00000554639 AMER1Q5JTC6 1135 aaPredicted RBP24.09■■□□□ 1.45
MEG3-224ENST00000554639 TMEM131LA2VDJ0 1609 aa24.08■■□□□ 1.45
MEG3-224ENST00000554639 CC2D1BQ5T0F9 858 aaKnown RBP24.08■■□□□ 1.45
MEG3-224ENST00000554639 QRICH2Q9H0J4 1663 aa24.07■■□□□ 1.44
MEG3-224ENST00000554639 PDE3BQ13370 1112 aa24.07■■□□□ 1.44
MEG3-224ENST00000554639 IDI1Q13907 227 aa24.06■■□□□ 1.44
MEG3-224ENST00000554639 KIF13AQ9H1H9 1805 aa24.06■■□□□ 1.44
MEG3-224ENST00000554639 BLMP54132 1417 aaPredicted RBP24.05■■□□□ 1.44
MEG3-224ENST00000554639 ARHGEF40Q8TER5 1519 aa24.04■■□□□ 1.44
MEG3-224ENST00000554639 RNF123Q5XPI4 1314 aa24.01■■□□□ 1.43
MEG3-224ENST00000554639 BCANQ96GW7 911 aa24.01■■□□□ 1.43
MEG3-224ENST00000554639 ARHGEF28Q8N1W1 1705 aaKnown RBP24■■□□□ 1.43
MEG3-224ENST00000554639 SPATA31D1Q6ZQQ2 1576 aa23.99■■□□□ 1.43
MEG3-224ENST00000554639 PPP2R1AP30153 589 aa23.99■■□□□ 1.43
MEG3-224ENST00000554639 PPP4R2Q9NY27 417 aa23.98■■□□□ 1.43
MEG3-224ENST00000554639 MYO5BQ9ULV0 1848 aa23.97■■□□□ 1.43
MEG3-224ENST00000554639 TRAK1Q9UPV9 953 aa23.97■■□□□ 1.43
MEG3-224ENST00000554639 USP32Q8NFA0 1604 aa23.97■■□□□ 1.43
MEG3-224ENST00000554639 ANP32EQ9BTT0 268 aa23.96■■□□□ 1.43
MEG3-224ENST00000554639 CLTCQ00610 1675 aaKnown RBP23.96■■□□□ 1.43
MEG3-224ENST00000554639 EVC2Q86UK5 1308 aa23.93■■□□□ 1.42
MEG3-224ENST00000554639 NINLQ9Y2I6 1382 aa23.93■■□□□ 1.42
MEG3-224ENST00000554639 TMEM132EQ6IEE7 984 aa23.9■■□□□ 1.42
MEG3-224ENST00000554639 WDR43Q15061 677 aaKnown RBP eCLIP23.89■■□□□ 1.41
MEG3-224ENST00000554639 CARD14Q9BXL6 1004 aa23.87■■□□□ 1.41
MEG3-224ENST00000554639 TULP4Q9NRJ4 1543 aa23.87■■□□□ 1.41
MEG3-224ENST00000554639 FBXO31Q5XUX0 539 aaPredicted RBP23.86■■□□□ 1.41
MEG3-224ENST00000554639 NSD2O96028 1365 aa23.86■■□□□ 1.41
MEG3-224ENST00000554639 A2ML1A8K2U0 1454 aa23.86■■□□□ 1.41
MEG3-224ENST00000554639 ALKQ9UM73 1620 aa23.85■■□□□ 1.41
MEG3-224ENST00000554639 NGEFQ8N5V2 710 aa23.85■■□□□ 1.41
MEG3-224ENST00000554639 TSHZ2Q9NRE2 1034 aa23.84■■□□□ 1.41
MEG3-224ENST00000554639 PTPRMP28827 1452 aa23.84■■□□□ 1.41
MEG3-224ENST00000554639 YTHDC2Q9H6S0 1430 aaKnown RBP23.83■■□□□ 1.41
MEG3-224ENST00000554639 ANKRD36BQ8N2N9 1353 aa23.83■■□□□ 1.41
MEG3-224ENST00000554639 STAG3Q9UJ98 1225 aa23.83■■□□□ 1.41
MEG3-224ENST00000554639 ADAMTS8Q9UP79 889 aa23.83■■□□□ 1.41
MEG3-224ENST00000554639 DLC1Q96QB1 1528 aa23.83■■□□□ 1.41
MEG3-224ENST00000554639 NSD3Q9BZ95 1437 aa23.83■■□□□ 1.4
MEG3-224ENST00000554639 POLR3AO14802 1390 aaPredicted RBP23.82■■□□□ 1.4
MEG3-224ENST00000554639 IRX6P78412 446 aaPredicted RBP23.82■■□□□ 1.4
MEG3-224ENST00000554639 ATAD2Q6PL18 1390 aa23.8■■□□□ 1.4
MEG3-224ENST00000554639 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
MEG3-224ENST00000554639 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms