RNA–Protein interactions for RNA: ENST00000553142.5

B4GALNT1-216, Transcript of beta-1,4-N-acetyl-galactosaminyltransferase 1, humanhuman

TSL 2

Gene B4GALNT1, Length 5,580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
B4GALNT1-216ENST00000553142 RRP12Q5JTH9 1297 aaKnown RBP18.7■□□□□ 0.58
B4GALNT1-216ENST00000553142 WWC1Q8IX03 1113 aa18.7■□□□□ 0.58
B4GALNT1-216ENST00000553142 STK31Q9BXU1 1019 aa18.7■□□□□ 0.58
B4GALNT1-216ENST00000553142 EFCAB5A4FU69 1503 aa18.69■□□□□ 0.58
B4GALNT1-216ENST00000553142 BECN2A8MW95 431 aa18.69■□□□□ 0.58
B4GALNT1-216ENST00000553142 TPM1P09493 284 aa18.69■□□□□ 0.58
B4GALNT1-216ENST00000553142 TMX4Q9H1E5 349 aaPredicted RBP18.69■□□□□ 0.58
B4GALNT1-216ENST00000553142 ARAP1Q96P48 1450 aa18.69■□□□□ 0.58
B4GALNT1-216ENST00000553142 SMC4Q9NTJ3 1288 aa18.69■□□□□ 0.58
B4GALNT1-216ENST00000553142 DDX49Q9Y6V7 483 aaKnown RBP18.68■□□□□ 0.58
B4GALNT1-216ENST00000553142 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
B4GALNT1-216ENST00000553142 TEX35Q5T0J7 233 aa18.68■□□□□ 0.58
B4GALNT1-216ENST00000553142 H3BQV1 296 aa18.67■□□□□ 0.58
B4GALNT1-216ENST00000553142 IFFO2Q5TF58 517 aa18.67■□□□□ 0.58
B4GALNT1-216ENST00000553142 MYBBP1AQ9BQG0 1328 aaKnown RBP18.67■□□□□ 0.58
B4GALNT1-216ENST00000553142 ANKRD50Q9ULJ7 1429 aa18.67■□□□□ 0.58
B4GALNT1-216ENST00000553142 TPM2P07951 284 aa18.67■□□□□ 0.58
B4GALNT1-216ENST00000553142 COG3Q96JB2 828 aa18.66■□□□□ 0.58
B4GALNT1-216ENST00000553142 CGNL1Q0VF96 1302 aa18.66■□□□□ 0.58
B4GALNT1-216ENST00000553142 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
B4GALNT1-216ENST00000553142 CHMP4AQ9BY43 222 aa18.65■□□□□ 0.58
B4GALNT1-216ENST00000553142 SLC4A10Q6U841 1118 aa18.64■□□□□ 0.57
B4GALNT1-216ENST00000553142 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.64■□□□□ 0.57
B4GALNT1-216ENST00000553142 CLUAP1Q96AJ1 413 aa18.64■□□□□ 0.57
B4GALNT1-216ENST00000553142 HDAC5Q9UQL6 1122 aa18.64■□□□□ 0.57
B4GALNT1-216ENST00000553142 GSE1Q14687 1217 aa18.63■□□□□ 0.57
B4GALNT1-216ENST00000553142 FAM13BQ9NYF5 915 aa18.63■□□□□ 0.57
B4GALNT1-216ENST00000553142 AFAP1Q8N556 730 aa18.63■□□□□ 0.57
B4GALNT1-216ENST00000553142 FOXD4L6Q3SYB3 417 aaPredicted RBP18.63■□□□□ 0.57
B4GALNT1-216ENST00000553142 FOXD4L3Q6VB84 417 aaPredicted RBP18.63■□□□□ 0.57
B4GALNT1-216ENST00000553142 SKOR2Q2VWA4 1001 aaPredicted RBP18.62■□□□□ 0.57
B4GALNT1-216ENST00000553142 HECW1Q76N89 1606 aa18.62■□□□□ 0.57
B4GALNT1-216ENST00000553142 EHBP1L1Q8N3D4 1523 aa18.62■□□□□ 0.57
B4GALNT1-216ENST00000553142 FAM184AQ8NB25 1140 aa18.62■□□□□ 0.57
B4GALNT1-216ENST00000553142 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
B4GALNT1-216ENST00000553142 PRXQ9BXM0 1461 aa18.61■□□□□ 0.57
B4GALNT1-216ENST00000553142 LAMC3Q9Y6N6 1575 aa18.6■□□□□ 0.57
B4GALNT1-216ENST00000553142 ATP6V1DQ9Y5K8 247 aa18.6■□□□□ 0.57
B4GALNT1-216ENST00000553142 IPO7O95373 1038 aaKnown RBP18.6■□□□□ 0.57
B4GALNT1-216ENST00000553142 PCMTD1Q96MG8 357 aaPredicted RBP18.6■□□□□ 0.57
B4GALNT1-216ENST00000553142 G3V3G9 751 aa18.59■□□□□ 0.57
B4GALNT1-216ENST00000553142 DCAF8Q5TAQ9 597 aa18.59■□□□□ 0.57
B4GALNT1-216ENST00000553142 CENPJQ9HC77 1338 aaPredicted RBP18.58■□□□□ 0.57
B4GALNT1-216ENST00000553142 HOMER1Q86YM7 354 aa18.58■□□□□ 0.56
B4GALNT1-216ENST00000553142 SLC4A3P48751 1232 aa18.57■□□□□ 0.56
B4GALNT1-216ENST00000553142 NOM1Q5C9Z4 860 aaKnown RBP18.57■□□□□ 0.56
B4GALNT1-216ENST00000553142 FRAT2O75474 233 aaPredicted RBP18.56■□□□□ 0.56
B4GALNT1-216ENST00000553142 AKAP17AQ02040 695 aaKnown RBP18.55■□□□□ 0.56
B4GALNT1-216ENST00000553142 PDE3BQ13370 1112 aa18.55■□□□□ 0.56
B4GALNT1-216ENST00000553142 MCTP1Q6DN14 999 aa18.55■□□□□ 0.56
B4GALNT1-216ENST00000553142 RUFY1Q96T51 708 aa18.55■□□□□ 0.56
B4GALNT1-216ENST00000553142 RILPL2Q969X0 211 aa18.54■□□□□ 0.56
B4GALNT1-216ENST00000553142 EVA1CP58658 441 aa18.53■□□□□ 0.56
B4GALNT1-216ENST00000553142 CDR1P51861 262 aa18.53■□□□□ 0.56
B4GALNT1-216ENST00000553142 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
B4GALNT1-216ENST00000553142 AK7Q96M32 723 aa18.53■□□□□ 0.56
B4GALNT1-216ENST00000553142 PSME1Q06323 249 aa18.52■□□□□ 0.56
B4GALNT1-216ENST00000553142 CHMP4CQ96CF2 233 aa18.52■□□□□ 0.56
B4GALNT1-216ENST00000553142 PRKRIP1Q9H875 184 aaPredicted RBP18.52■□□□□ 0.56
B4GALNT1-216ENST00000553142 C9orf84Q5VXU9 1444 aa18.52■□□□□ 0.56
B4GALNT1-216ENST00000553142 PLEKHH2Q8IVE3 1493 aa18.52■□□□□ 0.55
B4GALNT1-216ENST00000553142 TROQ12816 1431 aaPredicted RBP18.52■□□□□ 0.55
B4GALNT1-216ENST00000553142 ANKRD20A12PQ8NF67 263 aa18.52■□□□□ 0.55
B4GALNT1-216ENST00000553142 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
B4GALNT1-216ENST00000553142 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.51■□□□□ 0.55
B4GALNT1-216ENST00000553142 STAC3Q96MF2 364 aa18.5■□□□□ 0.55
B4GALNT1-216ENST00000553142 ARGLU1Q9NWB6 273 aaPredicted RBP18.5■□□□□ 0.55
B4GALNT1-216ENST00000553142 ACBD3Q9H3P7 528 aa18.49■□□□□ 0.55
B4GALNT1-216ENST00000553142 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
B4GALNT1-216ENST00000553142 FAM161AQ3B820 660 aa18.49■□□□□ 0.55
B4GALNT1-216ENST00000553142 MAP7D2Q96T17 732 aa18.49■□□□□ 0.55
B4GALNT1-216ENST00000553142 TIAM1Q13009 1591 aa18.48■□□□□ 0.55
B4GALNT1-216ENST00000553142 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
B4GALNT1-216ENST00000553142 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
B4GALNT1-216ENST00000553142 SYNE3Q6ZMZ3 975 aa18.48■□□□□ 0.55
B4GALNT1-216ENST00000553142 CCDC47Q96A33 483 aaKnown RBP18.48■□□□□ 0.55
B4GALNT1-216ENST00000553142 KIAA0586Q9BVV6 1533 aa18.48■□□□□ 0.55
B4GALNT1-216ENST00000553142 MNS1Q8NEH6 495 aa18.48■□□□□ 0.55
B4GALNT1-216ENST00000553142 IQGAP2Q13576 1575 aa18.47■□□□□ 0.55
B4GALNT1-216ENST00000553142 SUPT6HQ7KZ85 1726 aaKnown RBP18.47■□□□□ 0.55
B4GALNT1-216ENST00000553142 PDE4AP27815 886 aa18.47■□□□□ 0.55
B4GALNT1-216ENST00000553142 SCAPERQ9BY12 1400 aa18.47■□□□□ 0.55
B4GALNT1-216ENST00000553142 DIAPH1O60610 1272 aaKnown RBP18.47■□□□□ 0.55
B4GALNT1-216ENST00000553142 HSP90B2PQ58FF3 399 aa18.47■□□□□ 0.55
B4GALNT1-216ENST00000553142 TCEAL9Q9UHQ7 104 aa18.47■□□□□ 0.55
B4GALNT1-216ENST00000553142 MIA2Q96PC5 1412 aa18.46■□□□□ 0.55
B4GALNT1-216ENST00000553142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.46■□□□□ 0.55
B4GALNT1-216ENST00000553142 CCDC191Q8NCU4 936 aa18.46■□□□□ 0.55
B4GALNT1-216ENST00000553142 ELL2O00472 640 aaPredicted RBP18.46■□□□□ 0.55
B4GALNT1-216ENST00000553142 APPP05067 770 aa18.46■□□□□ 0.55
B4GALNT1-216ENST00000553142 FAM43AQ8N2R8 423 aa18.46■□□□□ 0.55
B4GALNT1-216ENST00000553142 TRIM29Q14134 588 aa18.46■□□□□ 0.55
B4GALNT1-216ENST00000553142 ANKRD45Q5TZF3 282 aa18.46■□□□□ 0.55
B4GALNT1-216ENST00000553142 CABP2Q9NPB3 220 aa18.46■□□□□ 0.55
B4GALNT1-216ENST00000553142 CDK13Q14004 1512 aaKnown RBP18.46■□□□□ 0.54
B4GALNT1-216ENST00000553142 CUL7Q14999 1698 aa18.45■□□□□ 0.54
B4GALNT1-216ENST00000553142 BICD2Q8TD16 824 aa18.45■□□□□ 0.54
B4GALNT1-216ENST00000553142 KRI1Q8N9T8 703 aaKnown RBP18.45■□□□□ 0.54
B4GALNT1-216ENST00000553142 ATF3P18847 181 aa18.44■□□□□ 0.54
B4GALNT1-216ENST00000553142 CENPQQ7L2Z9 268 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms