RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 STAG3Q9UJ98 1225 aa11.37□□□□□ -0.59
RAB5B-210ENST00000553116 MYOM2P54296 1465 aa11.37□□□□□ -0.59
RAB5B-210ENST00000553116 SYNMO15061 1565 aa11.37□□□□□ -0.59
RAB5B-210ENST00000553116 REREQ9P2R6 1566 aa11.37□□□□□ -0.59
RAB5B-210ENST00000553116 ARHGAP31Q2M1Z3 1444 aa11.37□□□□□ -0.59
RAB5B-210ENST00000553116 TMF1P82094 1093 aa11.37□□□□□ -0.59
RAB5B-210ENST00000553116 NUTM2DQ5VT03 806 aaPredicted RBP11.37□□□□□ -0.59
RAB5B-210ENST00000553116 IFT172Q9UG01 1749 aa11.37□□□□□ -0.59
RAB5B-210ENST00000553116 CLTCQ00610 1675 aaKnown RBP11.36□□□□□ -0.59
RAB5B-210ENST00000553116 EIF3AQ14152 1382 aaKnown RBP11.36□□□□□ -0.59
RAB5B-210ENST00000553116 PREX1Q8TCU6 1659 aa11.36□□□□□ -0.59
RAB5B-210ENST00000553116 AGLP35573 1532 aa11.36□□□□□ -0.59
RAB5B-210ENST00000553116 PRKRIP1Q9H875 184 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-210ENST00000553116 IDI1Q13907 227 aa11.35□□□□□ -0.59
RAB5B-210ENST00000553116 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-210ENST00000553116 SLC52A1Q9NWF4 448 aa11.35□□□□□ -0.59
RAB5B-210ENST00000553116 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
RAB5B-210ENST00000553116 FBXO31Q5XUX0 539 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-210ENST00000553116 PPLO60437 1756 aa11.35□□□□□ -0.59
RAB5B-210ENST00000553116 IQGAP1P46940 1657 aa11.34□□□□□ -0.59
RAB5B-210ENST00000553116 KIAA1210Q9ULL0 1709 aa11.34□□□□□ -0.59
RAB5B-210ENST00000553116 PIK3C2BO00750 1634 aa11.33□□□□□ -0.6
RAB5B-210ENST00000553116 DISP3Q9P2K9 1392 aa11.33□□□□□ -0.6
RAB5B-210ENST00000553116 RPGRIP1LQ68CZ1 1315 aa11.33□□□□□ -0.6
RAB5B-210ENST00000553116 PPP6R1Q9UPN7 881 aa11.33□□□□□ -0.6
RAB5B-210ENST00000553116 TESK2Q96S53 571 aa11.33□□□□□ -0.6
RAB5B-210ENST00000553116 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
RAB5B-210ENST00000553116 VGFO15240 615 aaPredicted RBP11.32□□□□□ -0.6
RAB5B-210ENST00000553116 MYO5BQ9ULV0 1848 aa11.32□□□□□ -0.6
RAB5B-210ENST00000553116 ERVK-7P63135 1459 aa11.31□□□□□ -0.6
RAB5B-210ENST00000553116 CDCA8Q53HL2 280 aa11.3□□□□□ -0.6
RAB5B-210ENST00000553116 PIK3C2GO75747 1445 aa11.29□□□□□ -0.6
RAB5B-210ENST00000553116 NRXN1Q9ULB1 1477 aa11.29□□□□□ -0.6
RAB5B-210ENST00000553116 TRAK1Q9UPV9 953 aa11.29□□□□□ -0.6
RAB5B-210ENST00000553116 TMEM132EQ6IEE7 984 aa11.29□□□□□ -0.6
RAB5B-210ENST00000553116 NEXMIFQ5QGS0 1516 aa11.29□□□□□ -0.6
RAB5B-210ENST00000553116 FAM9BQ8IZU0 186 aa11.29□□□□□ -0.6
RAB5B-210ENST00000553116 C14orf93Q9H972 538 aaKnown RBP11.28□□□□□ -0.6
RAB5B-210ENST00000553116 HNRNPUQ00839 825 aaKnown RBP eCLIP11.27□□□□□ -0.6
RAB5B-210ENST00000553116 TMEM131LA2VDJ0 1609 aa11.27□□□□□ -0.6
RAB5B-210ENST00000553116 CCDC184Q52MB2 194 aa11.27□□□□□ -0.61
RAB5B-210ENST00000553116 PANK3Q9H999 370 aa11.27□□□□□ -0.61
RAB5B-210ENST00000553116 ZMYM3Q14202 1370 aa11.26□□□□□ -0.61
RAB5B-210ENST00000553116 SETBP1Q9Y6X0 1596 aa11.26□□□□□ -0.61
RAB5B-210ENST00000553116 CENPJQ9HC77 1338 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-210ENST00000553116 RTN4Q9NQC3 1192 aaKnown RBP11.25□□□□□ -0.61
RAB5B-210ENST00000553116 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
RAB5B-210ENST00000553116 SPATA31D1Q6ZQQ2 1576 aa11.25□□□□□ -0.61
RAB5B-210ENST00000553116 KDM5AP29375 1690 aaKnown RBP11.25□□□□□ -0.61
RAB5B-210ENST00000553116 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
RAB5B-210ENST00000553116 TMC1Q8TDI8 760 aa11.24□□□□□ -0.61
RAB5B-210ENST00000553116 STK26Q9P289 416 aa11.24□□□□□ -0.61
RAB5B-210ENST00000553116 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
RAB5B-210ENST00000553116 RALBP1Q15311 655 aa11.23□□□□□ -0.61
RAB5B-210ENST00000553116 SAFB2Q14151 953 aaKnown RBP eCLIP11.23□□□□□ -0.61
RAB5B-210ENST00000553116 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
RAB5B-210ENST00000553116 QRICH2Q9H0J4 1663 aa11.22□□□□□ -0.61
RAB5B-210ENST00000553116 ADGRB1O14514 1584 aa11.22□□□□□ -0.61
RAB5B-210ENST00000553116 BCANQ96GW7 911 aa11.22□□□□□ -0.61
RAB5B-210ENST00000553116 MYBBP1AQ9BQG0 1328 aaKnown RBP11.22□□□□□ -0.61
RAB5B-210ENST00000553116 TNRQ92752 1358 aa11.21□□□□□ -0.61
RAB5B-210ENST00000553116 ZFYVE9O95405 1425 aa11.21□□□□□ -0.61
RAB5B-210ENST00000553116 MYO3AQ8NEV4 1616 aa11.21□□□□□ -0.62
RAB5B-210ENST00000553116 RIMS2Q9UQ26 1411 aa11.21□□□□□ -0.62
RAB5B-210ENST00000553116 A2ML1A8K2U0 1454 aa11.2□□□□□ -0.62
RAB5B-210ENST00000553116 CEBPAP49715 358 aaPredicted RBP11.19□□□□□ -0.62
RAB5B-210ENST00000553116 POGKQ9P215 609 aa11.19□□□□□ -0.62
RAB5B-210ENST00000553116 PER1O15534 1290 aaPredicted RBP11.19□□□□□ -0.62
RAB5B-210ENST00000553116 ARHGEF28Q8N1W1 1705 aaKnown RBP11.19□□□□□ -0.62
RAB5B-210ENST00000553116 SBNO2Q9Y2G9 1366 aa11.19□□□□□ -0.62
RAB5B-210ENST00000553116 FER1L4A9Z1Z3 1794 aa11.19□□□□□ -0.62
RAB5B-210ENST00000553116 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
RAB5B-210ENST00000553116 MYOM1P52179 1685 aa11.18□□□□□ -0.62
RAB5B-210ENST00000553116 HDGFP51858 240 aaKnown RBP11.18□□□□□ -0.62
RAB5B-210ENST00000553116 NLRP13Q86W25 1043 aa11.18□□□□□ -0.62
RAB5B-210ENST00000553116 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.17□□□□□ -0.62
RAB5B-210ENST00000553116 PARD3Q8TEW0 1356 aa11.17□□□□□ -0.62
RAB5B-210ENST00000553116 AEBP2Q6ZN18 517 aaPredicted RBP11.17□□□□□ -0.62
RAB5B-210ENST00000553116 EVC2Q86UK5 1308 aa11.17□□□□□ -0.62
RAB5B-210ENST00000553116 ALKQ9UM73 1620 aa11.17□□□□□ -0.62
RAB5B-210ENST00000553116 BRD4O60885 1362 aaPredicted RBP11.16□□□□□ -0.62
RAB5B-210ENST00000553116 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
RAB5B-210ENST00000553116 ASXL1Q8IXJ9 1541 aa11.16□□□□□ -0.62
RAB5B-210ENST00000553116 PRAM1Q96QH2 718 aa11.15□□□□□ -0.62
RAB5B-210ENST00000553116 SRPK2P78362 688 aaKnown RBP11.15□□□□□ -0.62
RAB5B-210ENST00000553116 MINK1Q8N4C8 1332 aaPredicted RBP11.15□□□□□ -0.62
RAB5B-210ENST00000553116 C3P01024 1663 aa11.14□□□□□ -0.63
RAB5B-210ENST00000553116 SENP3-EIF4A1A0A087X0R7 540 aa11.14□□□□□ -0.63
RAB5B-210ENST00000553116 UBR1Q8IWV7 1749 aa11.13□□□□□ -0.63
RAB5B-210ENST00000553116 CABP2Q9NPB3 220 aa11.13□□□□□ -0.63
RAB5B-210ENST00000553116 PNISRQ8TF01 805 aaKnown RBP11.13□□□□□ -0.63
RAB5B-210ENST00000553116 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
RAB5B-210ENST00000553116 NEFLP07196 543 aa11.12□□□□□ -0.63
RAB5B-210ENST00000553116 AMER1Q5JTC6 1135 aaPredicted RBP11.12□□□□□ -0.63
RAB5B-210ENST00000553116 TMEM2Q9UHN6 1383 aa11.12□□□□□ -0.63
RAB5B-210ENST00000553116 NLRP1Q9C000 1473 aa11.12□□□□□ -0.63
RAB5B-210ENST00000553116 ZBED9Q6R2W3 1325 aa11.11□□□□□ -0.63
RAB5B-210ENST00000553116 EID1Q9Y6B2 187 aa11.11□□□□□ -0.63
RAB5B-210ENST00000553116 TULP4Q9NRJ4 1543 aa11.11□□□□□ -0.63
RAB5B-210ENST00000553116 PTPRMP28827 1452 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms