RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 TRIM52Q96A61 297 aa20.9■□□□□ 0.94
LETMD1-235ENST00000552739 GTF3C3Q9Y5Q9 886 aa20.9■□□□□ 0.94
LETMD1-235ENST00000552739 ZFYVE9O95405 1425 aa20.88■□□□□ 0.93
LETMD1-235ENST00000552739 ZNF335Q9H4Z2 1342 aaPredicted RBP20.87■□□□□ 0.93
LETMD1-235ENST00000552739 LTKP29376 864 aa20.87■□□□□ 0.93
LETMD1-235ENST00000552739 CERKQ8TCT0 537 aa20.87■□□□□ 0.93
LETMD1-235ENST00000552739 KIF1BO60333 1816 aa20.86■□□□□ 0.93
LETMD1-235ENST00000552739 TXNDC2Q86VQ3 553 aa20.86■□□□□ 0.93
LETMD1-235ENST00000552739 EID1Q9Y6B2 187 aa20.86■□□□□ 0.93
LETMD1-235ENST00000552739 IQSEC2Q5JU85 1478 aa20.85■□□□□ 0.93
LETMD1-235ENST00000552739 STRCP1A6NGW2 1772 aa20.84■□□□□ 0.93
LETMD1-235ENST00000552739 SLC4A1APQ9BWU0 796 aaKnown RBP20.84■□□□□ 0.93
LETMD1-235ENST00000552739 RAB3GAP2Q9H2M9 1393 aa20.84■□□□□ 0.93
LETMD1-235ENST00000552739 RIMS2Q9UQ26 1411 aa20.83■□□□□ 0.93
LETMD1-235ENST00000552739 CPS1P31327 1500 aa20.83■□□□□ 0.93
LETMD1-235ENST00000552739 MIER1Q8N108 512 aa20.81■□□□□ 0.92
LETMD1-235ENST00000552739 ILDR1Q86SU0 546 aaPredicted RBP20.79■□□□□ 0.92
LETMD1-235ENST00000552739 FBXO41Q8TF61 875 aa20.79■□□□□ 0.92
LETMD1-235ENST00000552739 CHGAP10645 457 aaKnown RBP20.78■□□□□ 0.92
LETMD1-235ENST00000552739 PLEKHG1Q9ULL1 1385 aa20.77■□□□□ 0.92
LETMD1-235ENST00000552739 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
LETMD1-235ENST00000552739 NEXMIFQ5QGS0 1516 aa20.76■□□□□ 0.91
LETMD1-235ENST00000552739 DIP2AQ14689 1571 aa20.74■□□□□ 0.91
LETMD1-235ENST00000552739 NWD1Q149M9 1564 aa20.74■□□□□ 0.91
LETMD1-235ENST00000552739 HDGFP51858 240 aaKnown RBP20.73■□□□□ 0.91
LETMD1-235ENST00000552739 FOXD1Q16676 465 aa20.73■□□□□ 0.91
LETMD1-235ENST00000552739 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.73■□□□□ 0.91
LETMD1-235ENST00000552739 NRXN3Q9Y4C0 1643 aa20.73■□□□□ 0.91
LETMD1-235ENST00000552739 PPP1R15AO75807 674 aaPredicted RBP20.72■□□□□ 0.91
LETMD1-235ENST00000552739 PPLO60437 1756 aa20.72■□□□□ 0.91
LETMD1-235ENST00000552739 SETBP1Q9Y6X0 1596 aa20.71■□□□□ 0.91
LETMD1-235ENST00000552739 CHD2O14647 1828 aaKnown RBP20.71■□□□□ 0.91
LETMD1-235ENST00000552739 XIRP1Q702N8 1843 aaKnown RBP20.71■□□□□ 0.91
LETMD1-235ENST00000552739 LRRC7Q96NW7 1537 aa20.7■□□□□ 0.9
LETMD1-235ENST00000552739 CCDC144AA2RUR9 1427 aa20.7■□□□□ 0.9
LETMD1-235ENST00000552739 ADAMTS13Q76LX8 1427 aa20.69■□□□□ 0.9
LETMD1-235ENST00000552739 IFT172Q9UG01 1749 aa20.68■□□□□ 0.9
LETMD1-235ENST00000552739 SLC26A8Q96RN1 970 aa20.68■□□□□ 0.9
LETMD1-235ENST00000552739 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
LETMD1-235ENST00000552739 NUTM2DQ5VT03 806 aaPredicted RBP20.67■□□□□ 0.9
LETMD1-235ENST00000552739 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
LETMD1-235ENST00000552739 SPATA31E1Q6ZUB1 1445 aa20.65■□□□□ 0.9
LETMD1-235ENST00000552739 BCANQ96GW7 911 aa20.64■□□□□ 0.9
LETMD1-235ENST00000552739 TIMELESSQ9UNS1 1208 aa20.64■□□□□ 0.89
LETMD1-235ENST00000552739 SETD1AO15047 1707 aaKnown RBP20.63■□□□□ 0.89
LETMD1-235ENST00000552739 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
LETMD1-235ENST00000552739 TBX22Q9Y458 520 aa20.62■□□□□ 0.89
LETMD1-235ENST00000552739 KCNA6P17658 529 aa20.61■□□□□ 0.89
LETMD1-235ENST00000552739 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
LETMD1-235ENST00000552739 PIK3R4Q99570 1358 aa20.61■□□□□ 0.89
LETMD1-235ENST00000552739 RPGRIP1LQ68CZ1 1315 aa20.6■□□□□ 0.89
LETMD1-235ENST00000552739 XRN1Q8IZH2 1706 aaKnown RBP20.6■□□□□ 0.89
LETMD1-235ENST00000552739 ANKRD30BQ9BXX2 1392 aa20.58■□□□□ 0.88
LETMD1-235ENST00000552739 YTHDC1Q96MU7 727 aaKnown RBP20.56■□□□□ 0.88
LETMD1-235ENST00000552739 UBAP1LF5GYI3 381 aa20.56■□□□□ 0.88
LETMD1-235ENST00000552739 VGFO15240 615 aaPredicted RBP20.55■□□□□ 0.88
LETMD1-235ENST00000552739 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
LETMD1-235ENST00000552739 PTPRUQ92729 1446 aa20.55■□□□□ 0.88
LETMD1-235ENST00000552739 METP08581 1390 aa20.52■□□□□ 0.88
LETMD1-235ENST00000552739 TOM1O60784 492 aa20.5■□□□□ 0.87
LETMD1-235ENST00000552739 PROSER2Q86WR7 435 aaPredicted RBP20.5■□□□□ 0.87
LETMD1-235ENST00000552739 MYOM2P54296 1465 aa20.5■□□□□ 0.87
LETMD1-235ENST00000552739 RGL3Q3MIN7 710 aa20.5■□□□□ 0.87
LETMD1-235ENST00000552739 PIK3C2GO75747 1445 aa20.48■□□□□ 0.87
LETMD1-235ENST00000552739 NCOA3Q9Y6Q9 1424 aa20.48■□□□□ 0.87
LETMD1-235ENST00000552739 LAMC1P11047 1609 aa20.48■□□□□ 0.87
LETMD1-235ENST00000552739 NRXN1Q9ULB1 1477 aa20.48■□□□□ 0.87
LETMD1-235ENST00000552739 ADGRF5Q8IZF2 1346 aa20.47■□□□□ 0.87
LETMD1-235ENST00000552739 AMOTL2Q9Y2J4 779 aa20.47■□□□□ 0.87
LETMD1-235ENST00000552739 PRAG1Q86YV5 1406 aa20.46■□□□□ 0.87
LETMD1-235ENST00000552739 MYT1Q01538 1121 aa20.46■□□□□ 0.87
LETMD1-235ENST00000552739 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.45■□□□□ 0.86
LETMD1-235ENST00000552739 RBM33Q96EV2 1170 aaKnown RBP20.45■□□□□ 0.86
LETMD1-235ENST00000552739 ASXL1Q8IXJ9 1541 aa20.45■□□□□ 0.86
LETMD1-235ENST00000552739 MSH6P52701 1360 aa20.44■□□□□ 0.86
LETMD1-235ENST00000552739 KNDC1Q76NI1 1749 aa20.43■□□□□ 0.86
LETMD1-235ENST00000552739 NALCNQ8IZF0 1738 aa20.43■□□□□ 0.86
LETMD1-235ENST00000552739 PIP4K2BP78356 416 aa20.43■□□□□ 0.86
LETMD1-235ENST00000552739 PTCH1Q13635 1447 aa20.43■□□□□ 0.86
LETMD1-235ENST00000552739 ROBO1Q9Y6N7 1651 aa20.4■□□□□ 0.86
LETMD1-235ENST00000552739 DCCP43146 1447 aa20.38■□□□□ 0.85
LETMD1-235ENST00000552739 TECPR2O15040 1411 aa20.36■□□□□ 0.85
LETMD1-235ENST00000552739 ADGRL3Q9HAR2 1447 aa20.36■□□□□ 0.85
LETMD1-235ENST00000552739 FAM135BQ49AJ0 1406 aa20.36■□□□□ 0.85
LETMD1-235ENST00000552739 ROBO2Q9HCK4 1378 aa20.36■□□□□ 0.85
LETMD1-235ENST00000552739 C14orf37Q86TY3 774 aa20.35■□□□□ 0.85
LETMD1-235ENST00000552739 C19orf44Q9H6X5 657 aa20.34■□□□□ 0.85
LETMD1-235ENST00000552739 LRPPRCP42704 1394 aaKnown RBP20.34■□□□□ 0.85
LETMD1-235ENST00000552739 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.84
LETMD1-235ENST00000552739 ADGRB1O14514 1584 aa20.32■□□□□ 0.84
LETMD1-235ENST00000552739 HSPA1LP34931 641 aa20.32■□□□□ 0.84
LETMD1-235ENST00000552739 YTHDC2Q9H6S0 1430 aaKnown RBP20.32■□□□□ 0.84
LETMD1-235ENST00000552739 DCAF11Q8TEB1 546 aa20.31■□□□□ 0.84
LETMD1-235ENST00000552739 STAC3Q96MF2 364 aa20.31■□□□□ 0.84
LETMD1-235ENST00000552739 KIAA1210Q9ULL0 1709 aa20.31■□□□□ 0.84
LETMD1-235ENST00000552739 ABCC11Q96J66 1382 aa20.3■□□□□ 0.84
LETMD1-235ENST00000552739 CADPS2Q86UW7 1296 aa20.3■□□□□ 0.84
LETMD1-235ENST00000552739 CDC42BPGQ6DT37 1551 aa20.29■□□□□ 0.84
LETMD1-235ENST00000552739 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
LETMD1-235ENST00000552739 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms