RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 NUP153P49790 1475 aaKnown RBP11.95□□□□□ -0.5
SMARCC2-214ENST00000552674 PLEKHH1Q9ULM0 1364 aa11.95□□□□□ -0.5
SMARCC2-214ENST00000552674 CFAP70Q5T0N1 1121 aa11.95□□□□□ -0.5
SMARCC2-214ENST00000552674 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
SMARCC2-214ENST00000552674 TCP11L2Q8N4U5 519 aa11.95□□□□□ -0.5
SMARCC2-214ENST00000552674 KIAA0586Q9BVV6 1533 aa11.94□□□□□ -0.5
SMARCC2-214ENST00000552674 PTPRGP23470 1445 aa11.94□□□□□ -0.5
SMARCC2-214ENST00000552674 TESK2Q96S53 571 aa11.94□□□□□ -0.5
SMARCC2-214ENST00000552674 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
SMARCC2-214ENST00000552674 C22orf23Q9BZE7 217 aa11.94□□□□□ -0.5
SMARCC2-214ENST00000552674 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
SMARCC2-214ENST00000552674 SEC24BO95487 1268 aa11.93□□□□□ -0.5
SMARCC2-214ENST00000552674 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
SMARCC2-214ENST00000552674 CHMP5Q9NZZ3 219 aa11.93□□□□□ -0.5
SMARCC2-214ENST00000552674 TPRNQ4KMQ1 711 aa11.92□□□□□ -0.5
SMARCC2-214ENST00000552674 GBP4Q96PP9 640 aa11.92□□□□□ -0.5
SMARCC2-214ENST00000552674 STK26Q9P289 416 aa11.92□□□□□ -0.5
SMARCC2-214ENST00000552674 KANK1Q14678 1352 aa11.92□□□□□ -0.5
SMARCC2-214ENST00000552674 SRPK2P78362 688 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-214ENST00000552674 TRAK2O60296 914 aa11.91□□□□□ -0.5
SMARCC2-214ENST00000552674 DZIP1LQ8IYY4 767 aaKnown RBP11.91□□□□□ -0.5
SMARCC2-214ENST00000552674 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
SMARCC2-214ENST00000552674 KDM2BQ8NHM5 1336 aa11.91□□□□□ -0.5
SMARCC2-214ENST00000552674 WWC1Q8IX03 1113 aa11.91□□□□□ -0.5
SMARCC2-214ENST00000552674 DNMT1P26358 1616 aaKnown RBP11.91□□□□□ -0.5
SMARCC2-214ENST00000552674 HSP90AA2PQ14568 343 aaPredicted RBP11.91□□□□□ -0.5
SMARCC2-214ENST00000552674 APBB1O00213 710 aa11.9□□□□□ -0.5
SMARCC2-214ENST00000552674 GGT6Q6P531 493 aa11.9□□□□□ -0.5
SMARCC2-214ENST00000552674 VSIG10Q8N0Z9 540 aa11.9□□□□□ -0.5
SMARCC2-214ENST00000552674 MTHFSP49914 203 aa11.9□□□□□ -0.5
SMARCC2-214ENST00000552674 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.5
SMARCC2-214ENST00000552674 LNPKQ9C0E8 428 aa11.9□□□□□ -0.5
SMARCC2-214ENST00000552674 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
SMARCC2-214ENST00000552674 BCORL1Q5H9F3 1711 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 PRAG1Q86YV5 1406 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 IPO8O15397 1037 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 MCM4P33991 863 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 AFAP1Q8N556 730 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 NGEFQ8N5V2 710 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 SLC12A5Q9H2X9 1139 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 ADAMTS12P58397 1594 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 UHRF1BP1Q6BDS2 1440 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
SMARCC2-214ENST00000552674 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
SMARCC2-214ENST00000552674 ELL2O00472 640 aaPredicted RBP11.88□□□□□ -0.51
SMARCC2-214ENST00000552674 ARID3AQ99856 593 aa11.88□□□□□ -0.51
SMARCC2-214ENST00000552674 NKTRP30414 1462 aaKnown RBP11.88□□□□□ -0.51
SMARCC2-214ENST00000552674 ZBTB7CA1YPR0 619 aa11.88□□□□□ -0.51
SMARCC2-214ENST00000552674 KIF14Q15058 1648 aa11.88□□□□□ -0.51
SMARCC2-214ENST00000552674 ANKRD45Q5TZF3 282 aa11.87□□□□□ -0.51
SMARCC2-214ENST00000552674 MSNP26038 577 aaKnown RBP11.87□□□□□ -0.51
SMARCC2-214ENST00000552674 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
SMARCC2-214ENST00000552674 MAGI1Q96QZ7 1491 aaPredicted RBP11.87□□□□□ -0.51
SMARCC2-214ENST00000552674 TMEM132EQ6IEE7 984 aa11.87□□□□□ -0.51
SMARCC2-214ENST00000552674 RARSP54136 660 aaKnown RBP11.86□□□□□ -0.51
SMARCC2-214ENST00000552674 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
SMARCC2-214ENST00000552674 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
SMARCC2-214ENST00000552674 KDM5CP41229 1560 aa11.86□□□□□ -0.51
SMARCC2-214ENST00000552674 PTMAP06454 111 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-214ENST00000552674 ARHGAP5Q13017 1502 aa11.85□□□□□ -0.51
SMARCC2-214ENST00000552674 MRC2Q9UBG0 1479 aa11.85□□□□□ -0.51
SMARCC2-214ENST00000552674 MRE11P49959 708 aa11.85□□□□□ -0.51
SMARCC2-214ENST00000552674 DDX19BQ9UMR2 479 aa11.85□□□□□ -0.51
SMARCC2-214ENST00000552674 RAPGEF6Q8TEU7 1601 aa11.85□□□□□ -0.51
SMARCC2-214ENST00000552674 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-214ENST00000552674 PANK2Q9BZ23 570 aa11.84□□□□□ -0.51
SMARCC2-214ENST00000552674 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
SMARCC2-214ENST00000552674 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
SMARCC2-214ENST00000552674 CCDC141Q6ZP82 1450 aa11.83□□□□□ -0.52
SMARCC2-214ENST00000552674 ARHGEF12Q9NZN5 1544 aa11.83□□□□□ -0.52
SMARCC2-214ENST00000552674 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
SMARCC2-214ENST00000552674 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
SMARCC2-214ENST00000552674 MVPQ14764 893 aaKnown RBP11.83□□□□□ -0.52
SMARCC2-214ENST00000552674 DNTTIP2Q5QJE6 756 aaKnown RBP11.83□□□□□ -0.52
SMARCC2-214ENST00000552674 RLBP1P12271 317 aa11.82□□□□□ -0.52
SMARCC2-214ENST00000552674 FOXD4L5Q5VV16 416 aaPredicted RBP11.82□□□□□ -0.52
SMARCC2-214ENST00000552674 FOXD4L4Q8WXT5 416 aaPredicted RBP11.82□□□□□ -0.52
SMARCC2-214ENST00000552674 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
SMARCC2-214ENST00000552674 IFT140Q96RY7 1462 aa11.82□□□□□ -0.52
SMARCC2-214ENST00000552674 RIPK4P57078 832 aa11.82□□□□□ -0.52
SMARCC2-214ENST00000552674 XRCC6P12956 609 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMARCC2-214ENST00000552674 BLMP54132 1417 aaPredicted RBP11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 GGNBP2Q9H3C7 697 aa11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 MBD5Q9P267 1494 aa11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 CALD1Q05682 793 aaKnown RBP11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 GRPEL1Q9HAV7 217 aa11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 COL17A1Q9UMD9 1497 aaPredicted RBP11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 AAMPQ13685 434 aa11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 CASC1Q6TDU7 716 aa11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 RRAGDQ9NQL2 400 aaPredicted RBP11.81□□□□□ -0.52
SMARCC2-214ENST00000552674 DISP1Q96F81 1524 aa11.8□□□□□ -0.52
SMARCC2-214ENST00000552674 CHMP4BQ9H444 224 aaKnown RBP11.8□□□□□ -0.52
SMARCC2-214ENST00000552674 ZMYM4Q5VZL5 1548 aa11.8□□□□□ -0.52
SMARCC2-214ENST00000552674 UBE2Q2Q8WVN8 375 aa11.8□□□□□ -0.52
SMARCC2-214ENST00000552674 NOB1Q9ULX3 412 aaKnown RBP11.8□□□□□ -0.52
SMARCC2-214ENST00000552674 FAM135AQ9P2D6 1515 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms