RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
TROAP-213ENST00000550709 SPHKAPQ2M3C7 1700 aa20.22■□□□□ 0.83
TROAP-213ENST00000550709 CCDC144AA2RUR9 1427 aa20.21■□□□□ 0.83
TROAP-213ENST00000550709 ZFYVE9O95405 1425 aa20.2■□□□□ 0.82
TROAP-213ENST00000550709 RGL3Q3MIN7 710 aa20.2■□□□□ 0.82
TROAP-213ENST00000550709 CLTCL1P53675 1640 aa20.2■□□□□ 0.82
TROAP-213ENST00000550709 CERKQ8TCT0 537 aa20.19■□□□□ 0.82
TROAP-213ENST00000550709 ILDR1Q86SU0 546 aaPredicted RBP20.18■□□□□ 0.82
TROAP-213ENST00000550709 KDM5AP29375 1690 aaKnown RBP20.17■□□□□ 0.82
TROAP-213ENST00000550709 POLR1AO95602 1720 aaPredicted RBP20.16■□□□□ 0.82
TROAP-213ENST00000550709 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
TROAP-213ENST00000550709 ANKRD30BQ9BXX2 1392 aa20.14■□□□□ 0.81
TROAP-213ENST00000550709 IQGAP1P46940 1657 aa20.13■□□□□ 0.81
TROAP-213ENST00000550709 MYO5BQ9ULV0 1848 aa20.11■□□□□ 0.81
TROAP-213ENST00000550709 RPGRIP1LQ68CZ1 1315 aa20.11■□□□□ 0.81
TROAP-213ENST00000550709 LTBP4Q8N2S1 1624 aa20.1■□□□□ 0.81
TROAP-213ENST00000550709 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
TROAP-213ENST00000550709 PCGF6Q9BYE7 350 aa20.1■□□□□ 0.81
TROAP-213ENST00000550709 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
TROAP-213ENST00000550709 SPATA31E1Q6ZUB1 1445 aa20.08■□□□□ 0.8
TROAP-213ENST00000550709 KCNA6P17658 529 aa20.06■□□□□ 0.8
TROAP-213ENST00000550709 ADAMTS13Q76LX8 1427 aa20.05■□□□□ 0.8
TROAP-213ENST00000550709 NEXMIFQ5QGS0 1516 aa20.05■□□□□ 0.8
TROAP-213ENST00000550709 ADGRF5Q8IZF2 1346 aa20.04■□□□□ 0.8
TROAP-213ENST00000550709 RBM33Q96EV2 1170 aaKnown RBP20.03■□□□□ 0.8
TROAP-213ENST00000550709 KIF1BO60333 1816 aa20.03■□□□□ 0.8
TROAP-213ENST00000550709 PROSER2Q86WR7 435 aaPredicted RBP20.02■□□□□ 0.8
TROAP-213ENST00000550709 FBXO41Q8TF61 875 aa20.02■□□□□ 0.8
TROAP-213ENST00000550709 CPS1P31327 1500 aa20.02■□□□□ 0.79
TROAP-213ENST00000550709 DHX57Q6P158 1386 aaKnown RBP20.01■□□□□ 0.79
TROAP-213ENST00000550709 KDM2AQ9Y2K7 1162 aa20.01■□□□□ 0.79
TROAP-213ENST00000550709 METP08581 1390 aa19.99■□□□□ 0.79
TROAP-213ENST00000550709 AMOTL2Q9Y2J4 779 aa19.99■□□□□ 0.79
TROAP-213ENST00000550709 UBAP1LF5GYI3 381 aa19.98■□□□□ 0.79
TROAP-213ENST00000550709 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
TROAP-213ENST00000550709 DCAF11Q8TEB1 546 aa19.98■□□□□ 0.79
TROAP-213ENST00000550709 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
TROAP-213ENST00000550709 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
TROAP-213ENST00000550709 TMEM94Q12767 1356 aa19.95■□□□□ 0.79
TROAP-213ENST00000550709 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
TROAP-213ENST00000550709 PIK3R4Q99570 1358 aa19.95■□□□□ 0.78
TROAP-213ENST00000550709 PTPRUQ92729 1446 aa19.94■□□□□ 0.78
TROAP-213ENST00000550709 STRCP1A6NGW2 1772 aa19.93■□□□□ 0.78
TROAP-213ENST00000550709 DIP2AQ14689 1571 aa19.93■□□□□ 0.78
TROAP-213ENST00000550709 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
TROAP-213ENST00000550709 NRXN3Q9Y4C0 1643 aa19.92■□□□□ 0.78
TROAP-213ENST00000550709 C14orf37Q86TY3 774 aa19.92■□□□□ 0.78
TROAP-213ENST00000550709 PIP4K2BP78356 416 aa19.91■□□□□ 0.78
TROAP-213ENST00000550709 CFAP70Q5T0N1 1121 aa19.91■□□□□ 0.78
TROAP-213ENST00000550709 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
TROAP-213ENST00000550709 STK26Q9P289 416 aa19.91■□□□□ 0.78
TROAP-213ENST00000550709 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
TROAP-213ENST00000550709 TOM1O60784 492 aa19.9■□□□□ 0.78
TROAP-213ENST00000550709 NKTRP30414 1462 aaKnown RBP19.9■□□□□ 0.78
TROAP-213ENST00000550709 PPLO60437 1756 aa19.89■□□□□ 0.77
TROAP-213ENST00000550709 PIK3C2GO75747 1445 aa19.89■□□□□ 0.77
TROAP-213ENST00000550709 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
TROAP-213ENST00000550709 ALKQ9UM73 1620 aa19.89■□□□□ 0.77
TROAP-213ENST00000550709 NWD1Q149M9 1564 aa19.87■□□□□ 0.77
TROAP-213ENST00000550709 MYOM2P54296 1465 aa19.86■□□□□ 0.77
TROAP-213ENST00000550709 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
TROAP-213ENST00000550709 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
TROAP-213ENST00000550709 NRXN1Q9ULB1 1477 aa19.84■□□□□ 0.77
TROAP-213ENST00000550709 MSH6P52701 1360 aa19.83■□□□□ 0.77
TROAP-213ENST00000550709 ROBO2Q9HCK4 1378 aa19.83■□□□□ 0.77
TROAP-213ENST00000550709 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
TROAP-213ENST00000550709 C19orf44Q9H6X5 657 aa19.81■□□□□ 0.76
TROAP-213ENST00000550709 IFT172Q9UG01 1749 aa19.81■□□□□ 0.76
TROAP-213ENST00000550709 LRPPRCP42704 1394 aaKnown RBP19.81■□□□□ 0.76
TROAP-213ENST00000550709 ATF3P18847 181 aa19.8■□□□□ 0.76
TROAP-213ENST00000550709 WAPLQ7Z5K2 1190 aa19.8■□□□□ 0.76
TROAP-213ENST00000550709 YTHDC2Q9H6S0 1430 aaKnown RBP19.78■□□□□ 0.76
TROAP-213ENST00000550709 NCOA3Q9Y6Q9 1424 aa19.78■□□□□ 0.76
TROAP-213ENST00000550709 XRN1Q8IZH2 1706 aaKnown RBP19.77■□□□□ 0.76
TROAP-213ENST00000550709 SLAIN2Q9P270 581 aa19.77■□□□□ 0.76
TROAP-213ENST00000550709 ABCC11Q96J66 1382 aa19.77■□□□□ 0.76
TROAP-213ENST00000550709 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
TROAP-213ENST00000550709 TONSLQ96HA7 1378 aa19.76■□□□□ 0.75
TROAP-213ENST00000550709 CADPS2Q86UW7 1296 aa19.76■□□□□ 0.75
TROAP-213ENST00000550709 TRAK1Q9UPV9 953 aa19.76■□□□□ 0.75
TROAP-213ENST00000550709 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
TROAP-213ENST00000550709 SAFB2Q14151 953 aaKnown RBP eCLIP19.75■□□□□ 0.75
TROAP-213ENST00000550709 CCER1Q8TC90 406 aaPredicted RBP19.75■□□□□ 0.75
TROAP-213ENST00000550709 SETD1AO15047 1707 aaKnown RBP19.75■□□□□ 0.75
TROAP-213ENST00000550709 PLEKHH1Q9ULM0 1364 aa19.74■□□□□ 0.75
TROAP-213ENST00000550709 NBPF1Q3BBV0 1214 aa19.74■□□□□ 0.75
TROAP-213ENST00000550709 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
TROAP-213ENST00000550709 HSPA1LP34931 641 aa19.73■□□□□ 0.75
TROAP-213ENST00000550709 PRAM1Q96QH2 718 aa19.73■□□□□ 0.75
TROAP-213ENST00000550709 XIRP1Q702N8 1843 aaKnown RBP19.72■□□□□ 0.75
TROAP-213ENST00000550709 POGKQ9P215 609 aa19.72■□□□□ 0.75
TROAP-213ENST00000550709 TECPR2O15040 1411 aa19.71■□□□□ 0.75
TROAP-213ENST00000550709 ADGRL3Q9HAR2 1447 aa19.71■□□□□ 0.75
TROAP-213ENST00000550709 NBPF8Q3BBV2 869 aa19.69■□□□□ 0.74
TROAP-213ENST00000550709 SIRT1Q96EB6 747 aa19.69■□□□□ 0.74
TROAP-213ENST00000550709 ADGRB1O14514 1584 aa19.69■□□□□ 0.74
TROAP-213ENST00000550709 LAMC1P11047 1609 aa19.67■□□□□ 0.74
TROAP-213ENST00000550709 FAM135BQ49AJ0 1406 aa19.67■□□□□ 0.74
TROAP-213ENST00000550709 NUTM2FA1L443 756 aa19.66■□□□□ 0.74
TROAP-213ENST00000550709 DCCP43146 1447 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms