RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.78■■□□□ 1.72
CDK4-207ENST00000550419 RIMS2Q9UQ26 1411 aa25.78■■□□□ 1.72
CDK4-207ENST00000550419 IQGAP1P46940 1657 aa25.77■■□□□ 1.72
CDK4-207ENST00000550419 KIF1BO60333 1816 aa25.76■■□□□ 1.71
CDK4-207ENST00000550419 ANKRD30BQ9BXX2 1392 aa25.72■■□□□ 1.71
CDK4-207ENST00000550419 PLEKHG1Q9ULL1 1385 aa25.71■■□□□ 1.71
CDK4-207ENST00000550419 RPGRIP1LQ68CZ1 1315 aa25.69■■□□□ 1.7
CDK4-207ENST00000550419 SPATA31E1Q6ZUB1 1445 aa25.69■■□□□ 1.7
CDK4-207ENST00000550419 PPP1R15AO75807 674 aaPredicted RBP25.68■■□□□ 1.7
CDK4-207ENST00000550419 ZNF326Q5BKZ1 582 aaKnown RBP25.68■■□□□ 1.7
CDK4-207ENST00000550419 LTBP4Q8N2S1 1624 aa25.67■■□□□ 1.7
CDK4-207ENST00000550419 NEXMIFQ5QGS0 1516 aa25.67■■□□□ 1.7
CDK4-207ENST00000550419 ZNF335Q9H4Z2 1342 aaPredicted RBP25.65■■□□□ 1.7
CDK4-207ENST00000550419 VGFO15240 615 aaPredicted RBP25.61■■□□□ 1.69
CDK4-207ENST00000550419 TBX22Q9Y458 520 aa25.6■■□□□ 1.69
CDK4-207ENST00000550419 DIP2AQ14689 1571 aa25.6■■□□□ 1.69
CDK4-207ENST00000550419 CPS1P31327 1500 aa25.59■■□□□ 1.69
CDK4-207ENST00000550419 NUTM2DQ5VT03 806 aaPredicted RBP25.59■■□□□ 1.69
CDK4-207ENST00000550419 CERKQ8TCT0 537 aa25.59■■□□□ 1.69
CDK4-207ENST00000550419 SETBP1Q9Y6X0 1596 aa25.59■■□□□ 1.69
CDK4-207ENST00000550419 ADAMTS13Q76LX8 1427 aa25.58■■□□□ 1.69
CDK4-207ENST00000550419 SLC26A8Q96RN1 970 aa25.58■■□□□ 1.69
CDK4-207ENST00000550419 PPLO60437 1756 aa25.57■■□□□ 1.68
CDK4-207ENST00000550419 BCANQ96GW7 911 aa25.57■■□□□ 1.68
CDK4-207ENST00000550419 IQSEC2Q5JU85 1478 aa25.57■■□□□ 1.68
CDK4-207ENST00000550419 RGL3Q3MIN7 710 aa25.55■■□□□ 1.68
CDK4-207ENST00000550419 PIK3R4Q99570 1358 aa25.55■■□□□ 1.68
CDK4-207ENST00000550419 NRXN3Q9Y4C0 1643 aa25.54■■□□□ 1.68
CDK4-207ENST00000550419 DHX57Q6P158 1386 aaKnown RBP25.54■■□□□ 1.68
CDK4-207ENST00000550419 FBXO41Q8TF61 875 aa25.53■■□□□ 1.68
CDK4-207ENST00000550419 IFT172Q9UG01 1749 aa25.53■■□□□ 1.68
CDK4-207ENST00000550419 KCNA6P17658 529 aa25.52■■□□□ 1.68
CDK4-207ENST00000550419 STRCP1A6NGW2 1772 aa25.5■■□□□ 1.67
CDK4-207ENST00000550419 NWD1Q149M9 1564 aa25.5■■□□□ 1.67
CDK4-207ENST00000550419 STAC3Q96MF2 364 aa25.48■■□□□ 1.67
CDK4-207ENST00000550419 PCGF6Q9BYE7 350 aa25.48■■□□□ 1.67
CDK4-207ENST00000550419 NKTRP30414 1462 aaKnown RBP25.47■■□□□ 1.67
CDK4-207ENST00000550419 MYOM2P54296 1465 aa25.47■■□□□ 1.67
CDK4-207ENST00000550419 CHD2O14647 1828 aaKnown RBP25.47■■□□□ 1.67
CDK4-207ENST00000550419 LRRC7Q96NW7 1537 aa25.46■■□□□ 1.67
CDK4-207ENST00000550419 ADGRF5Q8IZF2 1346 aa25.45■■□□□ 1.66
CDK4-207ENST00000550419 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.66
CDK4-207ENST00000550419 NRXN1Q9ULB1 1477 aa25.45■■□□□ 1.66
CDK4-207ENST00000550419 PIK3C2GO75747 1445 aa25.44■■□□□ 1.66
CDK4-207ENST00000550419 ALKQ9UM73 1620 aa25.42■■□□□ 1.66
CDK4-207ENST00000550419 METP08581 1390 aa25.41■■□□□ 1.66
CDK4-207ENST00000550419 SETD1AO15047 1707 aaKnown RBP25.4■■□□□ 1.66
CDK4-207ENST00000550419 PTPRUQ92729 1446 aa25.38■■□□□ 1.65
CDK4-207ENST00000550419 DCAF11Q8TEB1 546 aa25.37■■□□□ 1.65
CDK4-207ENST00000550419 AMOTL2Q9Y2J4 779 aa25.37■■□□□ 1.65
CDK4-207ENST00000550419 XRN1Q8IZH2 1706 aaKnown RBP25.37■■□□□ 1.65
CDK4-207ENST00000550419 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
CDK4-207ENST00000550419 NCOA3Q9Y6Q9 1424 aa25.36■■□□□ 1.65
CDK4-207ENST00000550419 TMEM94Q12767 1356 aa25.35■■□□□ 1.65
CDK4-207ENST00000550419 PROSER2Q86WR7 435 aaPredicted RBP25.35■■□□□ 1.65
CDK4-207ENST00000550419 LAMC1P11047 1609 aa25.34■■□□□ 1.65
CDK4-207ENST00000550419 C14orf93Q9H972 538 aaKnown RBP25.34■■□□□ 1.65
CDK4-207ENST00000550419 SIN3AQ96ST3 1273 aa25.33■■□□□ 1.65
CDK4-207ENST00000550419 XIRP1Q702N8 1843 aaKnown RBP25.32■■□□□ 1.64
CDK4-207ENST00000550419 KDM2AQ9Y2K7 1162 aa25.29■■□□□ 1.64
CDK4-207ENST00000550419 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
CDK4-207ENST00000550419 CLSPNQ9HAW4 1339 aa25.27■■□□□ 1.64
CDK4-207ENST00000550419 ASXL1Q8IXJ9 1541 aa25.27■■□□□ 1.64
CDK4-207ENST00000550419 TOM1O60784 492 aa25.26■■□□□ 1.63
CDK4-207ENST00000550419 NEUROD1Q13562 356 aa25.26■■□□□ 1.63
CDK4-207ENST00000550419 CFAP70Q5T0N1 1121 aa25.26■■□□□ 1.63
CDK4-207ENST00000550419 LRPPRCP42704 1394 aaKnown RBP25.26■■□□□ 1.63
CDK4-207ENST00000550419 TECPR2O15040 1411 aa25.26■■□□□ 1.63
CDK4-207ENST00000550419 UBAP1LF5GYI3 381 aa25.25■■□□□ 1.63
CDK4-207ENST00000550419 L3MBTL2Q969R5 705 aa25.25■■□□□ 1.63
CDK4-207ENST00000550419 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
CDK4-207ENST00000550419 YTHDC2Q9H6S0 1430 aaKnown RBP25.22■■□□□ 1.63
CDK4-207ENST00000550419 MSH6P52701 1360 aa25.22■■□□□ 1.63
CDK4-207ENST00000550419 ROBO2Q9HCK4 1378 aa25.21■■□□□ 1.63
CDK4-207ENST00000550419 TMEM132EQ6IEE7 984 aa25.21■■□□□ 1.63
CDK4-207ENST00000550419 RBM33Q96EV2 1170 aaKnown RBP25.21■■□□□ 1.63
CDK4-207ENST00000550419 ADGRB1O14514 1584 aa25.21■■□□□ 1.63
CDK4-207ENST00000550419 SIRT1Q96EB6 747 aa25.2■■□□□ 1.62
CDK4-207ENST00000550419 C19orf44Q9H6X5 657 aa25.2■■□□□ 1.62
CDK4-207ENST00000550419 KNDC1Q76NI1 1749 aa25.2■■□□□ 1.62
CDK4-207ENST00000550419 KIAA1210Q9ULL0 1709 aa25.19■■□□□ 1.62
CDK4-207ENST00000550419 DCCP43146 1447 aa25.18■■□□□ 1.62
CDK4-207ENST00000550419 FAM135BQ49AJ0 1406 aa25.17■■□□□ 1.62
CDK4-207ENST00000550419 C14orf37Q86TY3 774 aa25.16■■□□□ 1.62
CDK4-207ENST00000550419 ADGRL3Q9HAR2 1447 aa25.16■■□□□ 1.62
CDK4-207ENST00000550419 TONSLQ96HA7 1378 aa25.16■■□□□ 1.62
CDK4-207ENST00000550419 STK26Q9P289 416 aa25.15■■□□□ 1.62
CDK4-207ENST00000550419 DLC1Q96QB1 1528 aa25.14■■□□□ 1.62
CDK4-207ENST00000550419 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.13■■□□□ 1.61
CDK4-207ENST00000550419 CADPS2Q86UW7 1296 aa25.13■■□□□ 1.61
CDK4-207ENST00000550419 NALCNQ8IZF0 1738 aa25.1■■□□□ 1.61
CDK4-207ENST00000550419 ATF3P18847 181 aa25.1■■□□□ 1.61
CDK4-207ENST00000550419 TIMELESSQ9UNS1 1208 aa25.1■■□□□ 1.61
CDK4-207ENST00000550419 SLAIN2Q9P270 581 aa25.09■■□□□ 1.61
CDK4-207ENST00000550419 PIP4K2BP78356 416 aa25.07■■□□□ 1.6
CDK4-207ENST00000550419 CCER1Q8TC90 406 aaPredicted RBP25.07■■□□□ 1.6
CDK4-207ENST00000550419 WAPLQ7Z5K2 1190 aa25.06■■□□□ 1.6
CDK4-207ENST00000550419 TRPM1Q7Z4N2 1603 aa25.05■■□□□ 1.6
CDK4-207ENST00000550419 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
CDK4-207ENST00000550419 NBPF1Q3BBV0 1214 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms