RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
SMARCC2-207ENST00000549757 FAM198AQ9UFP1 575 aa9.27□□□□□ -0.93
SMARCC2-207ENST00000549757 AQRO60306 1485 aaKnown RBP eCLIP9.27□□□□□ -0.932e-6■■□□□ 13.5
SMARCC2-207ENST00000549757 PRSS12P56730 875 aa9.26□□□□□ -0.93
SMARCC2-207ENST00000549757 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
SMARCC2-207ENST00000549757 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
SMARCC2-207ENST00000549757 TARBP1Q13395 1621 aaKnown RBP9.26□□□□□ -0.93
SMARCC2-207ENST00000549757 PTGDRQ13258 359 aa9.25□□□□□ -0.93
SMARCC2-207ENST00000549757 SMYD5Q6GMV2 418 aa9.25□□□□□ -0.93
SMARCC2-207ENST00000549757 TTC13Q8NBP0 860 aa9.25□□□□□ -0.93
SMARCC2-207ENST00000549757 KIAA1468Q9P260 1216 aa9.25□□□□□ -0.93
SMARCC2-207ENST00000549757 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
SMARCC2-207ENST00000549757 POLA1P09884 1462 aaPredicted RBP9.25□□□□□ -0.93
SMARCC2-207ENST00000549757 NBPF3Q9H094 633 aa9.23□□□□□ -0.93
SMARCC2-207ENST00000549757 ARAP1Q96P48 1450 aa9.22□□□□□ -0.93
SMARCC2-207ENST00000549757 C3orf80F5H4A9 247 aa9.22□□□□□ -0.93
SMARCC2-207ENST00000549757 GPR37O15354 613 aa9.22□□□□□ -0.93
SMARCC2-207ENST00000549757 MRPL50Q8N5N7 158 aaKnown RBP9.22□□□□□ -0.93
SMARCC2-207ENST00000549757 RAD54L2Q9Y4B4 1467 aa9.21□□□□□ -0.93
SMARCC2-207ENST00000549757 NUTM2FA1L443 756 aa9.21□□□□□ -0.94
SMARCC2-207ENST00000549757 PADI6Q6TGC4 694 aa9.21□□□□□ -0.94
SMARCC2-207ENST00000549757 SOGA1O94964 1423 aa9.21□□□□□ -0.94
SMARCC2-207ENST00000549757 SNAPC4Q5SXM2 1469 aa9.21□□□□□ -0.94
SMARCC2-207ENST00000549757 LAPTM4BQ86VI4 370 aa9.2□□□□□ -0.94
SMARCC2-207ENST00000549757 TDRD9Q8NDG6 1382 aaKnown RBP9.2□□□□□ -0.94
SMARCC2-207ENST00000549757 PACS2Q86VP3 889 aa9.19□□□□□ -0.94
SMARCC2-207ENST00000549757 STAC3Q96MF2 364 aa9.19□□□□□ -0.94
SMARCC2-207ENST00000549757 SEPT9Q9UHD8 586 aaPredicted RBP9.19□□□□□ -0.94
SMARCC2-207ENST00000549757 FGD5Q6ZNL6 1462 aa9.19□□□□□ -0.94
SMARCC2-207ENST00000549757 WDR97A6NE52 1622 aa9.18□□□□□ -0.94
SMARCC2-207ENST00000549757 SYNJ1O43426 1573 aa9.18□□□□□ -0.94
SMARCC2-207ENST00000549757 CHMP7Q8WUX9 453 aaPredicted RBP9.18□□□□□ -0.94
SMARCC2-207ENST00000549757 FCHSD2O94868 740 aa9.17□□□□□ -0.94
SMARCC2-207ENST00000549757 FAM98CQ17RN3 349 aaKnown RBP9.17□□□□□ -0.94
SMARCC2-207ENST00000549757 TATDN2Q93075 761 aa9.17□□□□□ -0.94
SMARCC2-207ENST00000549757 KCTD12Q96CX2 325 aaKnown RBP9.17□□□□□ -0.94
SMARCC2-207ENST00000549757 SMAPO00193 183 aa9.16□□□□□ -0.94
SMARCC2-207ENST00000549757 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
SMARCC2-207ENST00000549757 MAGI1Q96QZ7 1491 aaPredicted RBP9.15□□□□□ -0.94
SMARCC2-207ENST00000549757 NBPF26B4DH59 902 aa9.15□□□□□ -0.94
SMARCC2-207ENST00000549757 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
SMARCC2-207ENST00000549757 CLASP1Q7Z460 1538 aa9.15□□□□□ -0.95
SMARCC2-207ENST00000549757 GRIN2BQ13224 1484 aa9.15□□□□□ -0.95
SMARCC2-207ENST00000549757 HIC1Q14526 733 aa9.14□□□□□ -0.95
SMARCC2-207ENST00000549757 THSD4Q6ZMP0 1018 aa9.14□□□□□ -0.95
SMARCC2-207ENST00000549757 NUDT18Q6ZVK8 323 aa9.14□□□□□ -0.95
SMARCC2-207ENST00000549757 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMARCC2-207ENST00000549757 NPM2Q86SE8 214 aaKnown RBP9.14□□□□□ -0.95
SMARCC2-207ENST00000549757 WNT2BQ93097 391 aa9.14□□□□□ -0.95
SMARCC2-207ENST00000549757 CUX1P39880 1505 aa9.14□□□□□ -0.95
SMARCC2-207ENST00000549757 GOLGA8CPA6NN73 597 aa9.13□□□□□ -0.95
SMARCC2-207ENST00000549757 SUPT5HO00267 1087 aaKnown RBP9.13□□□□□ -0.95
SMARCC2-207ENST00000549757 FECHP22830 423 aa9.13□□□□□ -0.95
SMARCC2-207ENST00000549757 GPIHBP1Q8IV16 184 aa9.13□□□□□ -0.95
SMARCC2-207ENST00000549757 SYNJ2O15056 1496 aa9.13□□□□□ -0.95
SMARCC2-207ENST00000549757 PBRM1Q86U86 1689 aa9.13□□□□□ -0.95
SMARCC2-207ENST00000549757 GNPATO15228 680 aa9.12□□□□□ -0.95
SMARCC2-207ENST00000549757 EYA1Q99502 592 aa9.12□□□□□ -0.95
SMARCC2-207ENST00000549757 ADGRG1Q9Y653 693 aa9.12□□□□□ -0.95
SMARCC2-207ENST00000549757 ANKK1Q8NFD2 765 aa9.11□□□□□ -0.95
SMARCC2-207ENST00000549757 GAPVD1Q14C86 1478 aa9.1□□□□□ -0.95
SMARCC2-207ENST00000549757 SOWAHBA6NEL2 793 aa9.1□□□□□ -0.95
SMARCC2-207ENST00000549757 HCSTQ9UBK5 93 aa9.1□□□□□ -0.95
SMARCC2-207ENST00000549757 BCAMP50895 628 aa9.09□□□□□ -0.95
SMARCC2-207ENST00000549757 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
SMARCC2-207ENST00000549757 LMOD2Q6P5Q4 547 aa9.09□□□□□ -0.95
SMARCC2-207ENST00000549757 TRIM26Q12899 539 aaPredicted RBP9.07□□□□□ -0.96
SMARCC2-207ENST00000549757 SAMD7Q7Z3H4 446 aa9.07□□□□□ -0.96
SMARCC2-207ENST00000549757 ABCA5Q8WWZ7 1642 aa9.06□□□□□ -0.96
SMARCC2-207ENST00000549757 PTPN5P54829 565 aa9.06□□□□□ -0.96
SMARCC2-207ENST00000549757 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.06□□□□□ -0.96
SMARCC2-207ENST00000549757 ABCA10Q8WWZ4 1543 aa9.05□□□□□ -0.96
SMARCC2-207ENST00000549757 RBM46Q8TBY0 533 aaKnown RBP9.05□□□□□ -0.96
SMARCC2-207ENST00000549757 PXYLP1Q8TE99 480 aa9.05□□□□□ -0.96
SMARCC2-207ENST00000549757 LRCH3Q96II8 777 aa9.05□□□□□ -0.96
SMARCC2-207ENST00000549757 UBTFP17480 764 aaKnown RBP9.04□□□□□ -0.96
SMARCC2-207ENST00000549757 SWT1Q5T5J6 900 aaKnown RBP9.03□□□□□ -0.96
SMARCC2-207ENST00000549757 METTL3Q86U44 580 aaKnown RBP9.03□□□□□ -0.96
SMARCC2-207ENST00000549757 WBP1LQ9NX94 342 aa9.03□□□□□ -0.96
SMARCC2-207ENST00000549757 GRIN2AQ12879 1464 aa9.02□□□□□ -0.96
SMARCC2-207ENST00000549757 RCCD1A6NED2 376 aa9.02□□□□□ -0.97
SMARCC2-207ENST00000549757 OATP04181 439 aa9.02□□□□□ -0.97
SMARCC2-207ENST00000549757 DNAJB2P25686 324 aa9.02□□□□□ -0.97
SMARCC2-207ENST00000549757 TSR3Q9UJK0 312 aaKnown RBP9.02□□□□□ -0.97
SMARCC2-207ENST00000549757 HPS5Q9UPZ3 1129 aa9.02□□□□□ -0.97
SMARCC2-207ENST00000549757 WRNQ14191 1432 aaPredicted RBP eCLIP9.02□□□□□ -0.97
SMARCC2-207ENST00000549757 ADAMTS12P58397 1594 aa9.02□□□□□ -0.97
SMARCC2-207ENST00000549757 MAP2K5Q13163 448 aa9.01□□□□□ -0.97
SMARCC2-207ENST00000549757 TMEM134Q9H6X4 195 aa9.01□□□□□ -0.97
SMARCC2-207ENST00000549757 CEP170Q5SW79 1584 aa9□□□□□ -0.97
SMARCC2-207ENST00000549757 ERCC6L2Q5T890 1561 aa9□□□□□ -0.97
SMARCC2-207ENST00000549757 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9□□□□□ -0.97
SMARCC2-207ENST00000549757 ZC3H15Q8WU90 426 aaKnown RBP9□□□□□ -0.97
SMARCC2-207ENST00000549757 PHOX2BQ99453 314 aa9□□□□□ -0.97
SMARCC2-207ENST00000549757 NYAP1Q6ZVC0 841 aa8.99□□□□□ -0.97
SMARCC2-207ENST00000549757 IRF6O14896 467 aa8.98□□□□□ -0.97
SMARCC2-207ENST00000549757 ZMYND10O75800 440 aa8.98□□□□□ -0.97
SMARCC2-207ENST00000549757 HRCP23327 699 aa8.98□□□□□ -0.97
SMARCC2-207ENST00000549757 TOP2BQ02880 1626 aa8.98□□□□□ -0.97
SMARCC2-207ENST00000549757 BIVM-ERCC5R4GMW8 1640 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms