RNA–Protein interactions for RNA: ENST00000549340.5

LETMD1-218, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-218ENST00000549340 ST20-MTHFSA0A0A6YYL1 179 aa20.32■□□□□ 0.84
LETMD1-218ENST00000549340 NBPF1Q3BBV0 1214 aa20.32■□□□□ 0.84
LETMD1-218ENST00000549340 RPGRIP1LQ68CZ1 1315 aa20.29■□□□□ 0.84
LETMD1-218ENST00000549340 COL17A1Q9UMD9 1497 aaPredicted RBP20.29■□□□□ 0.84
LETMD1-218ENST00000549340 SCAF11Q99590 1463 aaKnown RBP20.28■□□□□ 0.84
LETMD1-218ENST00000549340 SETBP1Q9Y6X0 1596 aa20.28■□□□□ 0.84
LETMD1-218ENST00000549340 CLTCQ00610 1675 aaKnown RBP20.25■□□□□ 0.83
LETMD1-218ENST00000549340 SLC52A1Q9NWF4 448 aa20.23■□□□□ 0.83
LETMD1-218ENST00000549340 EIF3AQ14152 1382 aaKnown RBP20.22■□□□□ 0.83
LETMD1-218ENST00000549340 TESK2Q96S53 571 aa20.22■□□□□ 0.83
LETMD1-218ENST00000549340 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
LETMD1-218ENST00000549340 ERVK-7P63135 1459 aa20.22■□□□□ 0.83
LETMD1-218ENST00000549340 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
LETMD1-218ENST00000549340 MYO5BQ9ULV0 1848 aa20.21■□□□□ 0.83
LETMD1-218ENST00000549340 PRKRIP1Q9H875 184 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-218ENST00000549340 TMEM131LA2VDJ0 1609 aa20.2■□□□□ 0.82
LETMD1-218ENST00000549340 PIK3C2GO75747 1445 aa20.2■□□□□ 0.82
LETMD1-218ENST00000549340 ZFYVE9O95405 1425 aa20.19■□□□□ 0.82
LETMD1-218ENST00000549340 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
LETMD1-218ENST00000549340 ADGRF5Q8IZF2 1346 aa20.19■□□□□ 0.82
LETMD1-218ENST00000549340 SLC24A1O60721 1099 aa20.18■□□□□ 0.82
LETMD1-218ENST00000549340 TMF1P82094 1093 aa20.18■□□□□ 0.82
LETMD1-218ENST00000549340 KTN1Q86UP2 1357 aaKnown RBP20.17■□□□□ 0.82
LETMD1-218ENST00000549340 CHGAP10645 457 aaKnown RBP20.16■□□□□ 0.82
LETMD1-218ENST00000549340 DISP3Q9P2K9 1392 aa20.14■□□□□ 0.81
LETMD1-218ENST00000549340 POLR3GLQ9BT43 218 aa20.14■□□□□ 0.81
LETMD1-218ENST00000549340 IDI1Q13907 227 aa20.13■□□□□ 0.81
LETMD1-218ENST00000549340 KDM5AP29375 1690 aaKnown RBP20.13■□□□□ 0.81
LETMD1-218ENST00000549340 ADGRB1O14514 1584 aa20.12■□□□□ 0.81
LETMD1-218ENST00000549340 VGFO15240 615 aaPredicted RBP20.12■□□□□ 0.81
LETMD1-218ENST00000549340 CDCA8Q53HL2 280 aa20.12■□□□□ 0.81
LETMD1-218ENST00000549340 CFAP70Q5T0N1 1121 aa20.12■□□□□ 0.81
LETMD1-218ENST00000549340 C14orf93Q9H972 538 aaKnown RBP20.12■□□□□ 0.81
LETMD1-218ENST00000549340 SBNO2Q9Y2G9 1366 aa20.11■□□□□ 0.81
LETMD1-218ENST00000549340 SCAF1Q9H7N4 1312 aaKnown RBP20.1■□□□□ 0.81
LETMD1-218ENST00000549340 MYOM1P52179 1685 aa20.07■□□□□ 0.8
LETMD1-218ENST00000549340 QRICH2Q9H0J4 1663 aa20.07■□□□□ 0.8
LETMD1-218ENST00000549340 ARHGEF28Q8N1W1 1705 aaKnown RBP20.05■□□□□ 0.8
LETMD1-218ENST00000549340 RALBP1Q15311 655 aa20.05■□□□□ 0.8
LETMD1-218ENST00000549340 FBXO31Q5XUX0 539 aaPredicted RBP20.04■□□□□ 0.8
LETMD1-218ENST00000549340 ESF1Q9H501 851 aaKnown RBP20.03■□□□□ 0.8
LETMD1-218ENST00000549340 PER1O15534 1290 aaPredicted RBP20.02■□□□□ 0.8
LETMD1-218ENST00000549340 ZMYM3Q14202 1370 aa20.02■□□□□ 0.8
LETMD1-218ENST00000549340 A2ML1A8K2U0 1454 aa20.02■□□□□ 0.8
LETMD1-218ENST00000549340 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
LETMD1-218ENST00000549340 PARD3Q8TEW0 1356 aa20■□□□□ 0.79
LETMD1-218ENST00000549340 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
LETMD1-218ENST00000549340 CENPJQ9HC77 1338 aaPredicted RBP20■□□□□ 0.79
LETMD1-218ENST00000549340 MLECQ14165 292 aa19.99■□□□□ 0.79
LETMD1-218ENST00000549340 MYBBP1AQ9BQG0 1328 aaKnown RBP19.99■□□□□ 0.79
LETMD1-218ENST00000549340 BRD4O60885 1362 aaPredicted RBP19.98■□□□□ 0.79
LETMD1-218ENST00000549340 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
LETMD1-218ENST00000549340 CCDC184Q52MB2 194 aa19.97■□□□□ 0.79
LETMD1-218ENST00000549340 ALKQ9UM73 1620 aa19.96■□□□□ 0.79
LETMD1-218ENST00000549340 PANK3Q9H999 370 aa19.96■□□□□ 0.79
LETMD1-218ENST00000549340 SETD1AO15047 1707 aaKnown RBP19.96■□□□□ 0.79
LETMD1-218ENST00000549340 STAG3Q9UJ98 1225 aa19.95■□□□□ 0.78
LETMD1-218ENST00000549340 FER1L4A9Z1Z3 1794 aa19.95■□□□□ 0.78
LETMD1-218ENST00000549340 TNRQ92752 1358 aa19.95■□□□□ 0.78
LETMD1-218ENST00000549340 RIMS2Q9UQ26 1411 aa19.94■□□□□ 0.78
LETMD1-218ENST00000549340 PUS7Q96PZ0 661 aaKnown RBP19.94■□□□□ 0.78
LETMD1-218ENST00000549340 NPC1L1Q9UHC9 1359 aa19.94■□□□□ 0.78
LETMD1-218ENST00000549340 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
LETMD1-218ENST00000549340 TRAK1Q9UPV9 953 aa19.92■□□□□ 0.78
LETMD1-218ENST00000549340 C3P01024 1663 aa19.91■□□□□ 0.78
LETMD1-218ENST00000549340 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
LETMD1-218ENST00000549340 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.91■□□□□ 0.78
LETMD1-218ENST00000549340 NLRP1Q9C000 1473 aa19.91■□□□□ 0.78
LETMD1-218ENST00000549340 TMEM132EQ6IEE7 984 aa19.9■□□□□ 0.78
LETMD1-218ENST00000549340 DLC1Q96QB1 1528 aa19.9■□□□□ 0.78
LETMD1-218ENST00000549340 HNRNPUQ00839 825 aaKnown RBP eCLIP19.89■□□□□ 0.77
LETMD1-218ENST00000549340 NUTM2DQ5VT03 806 aaPredicted RBP19.89■□□□□ 0.77
LETMD1-218ENST00000549340 NLRP13Q86W25 1043 aa19.89■□□□□ 0.77
LETMD1-218ENST00000549340 YTHDC2Q9H6S0 1430 aaKnown RBP19.88■□□□□ 0.77
LETMD1-218ENST00000549340 NRXN3Q9Y4C0 1643 aa19.87■□□□□ 0.77
LETMD1-218ENST00000549340 PTPRMP28827 1452 aa19.87■□□□□ 0.77
LETMD1-218ENST00000549340 HDGFP51858 240 aaKnown RBP19.87■□□□□ 0.77
LETMD1-218ENST00000549340 TMC1Q8TDI8 760 aa19.87■□□□□ 0.77
LETMD1-218ENST00000549340 KNSTRNQ9Y448 316 aa19.87■□□□□ 0.77
LETMD1-218ENST00000549340 USP32Q8NFA0 1604 aa19.87■□□□□ 0.77
LETMD1-218ENST00000549340 TULP4Q9NRJ4 1543 aa19.86■□□□□ 0.77
LETMD1-218ENST00000549340 KNDC1Q76NI1 1749 aa19.86■□□□□ 0.77
LETMD1-218ENST00000549340 FAM9BQ8IZU0 186 aa19.86■□□□□ 0.77
LETMD1-218ENST00000549340 INSRP06213 1382 aa19.85■□□□□ 0.77
LETMD1-218ENST00000549340 LRPPRCP42704 1394 aaKnown RBP19.85■□□□□ 0.77
LETMD1-218ENST00000549340 PNISRQ8TF01 805 aaKnown RBP19.85■□□□□ 0.77
LETMD1-218ENST00000549340 EVC2Q86UK5 1308 aa19.84■□□□□ 0.77
LETMD1-218ENST00000549340 ZBED9Q6R2W3 1325 aa19.83■□□□□ 0.77
LETMD1-218ENST00000549340 AMER1Q5JTC6 1135 aaPredicted RBP19.83■□□□□ 0.77
LETMD1-218ENST00000549340 NINLQ9Y2I6 1382 aa19.82■□□□□ 0.76
LETMD1-218ENST00000549340 TMEM2Q9UHN6 1383 aa19.81■□□□□ 0.76
LETMD1-218ENST00000549340 CNGB1Q14028 1251 aaPredicted RBP19.8■□□□□ 0.76
LETMD1-218ENST00000549340 CC2D1BQ5T0F9 858 aaKnown RBP19.8■□□□□ 0.76
LETMD1-218ENST00000549340 ABCC11Q96J66 1382 aa19.79■□□□□ 0.76
LETMD1-218ENST00000549340 SLIT1O75093 1534 aa19.77■□□□□ 0.76
LETMD1-218ENST00000549340 ARHGAP23Q9P227 1491 aa19.75■□□□□ 0.75
LETMD1-218ENST00000549340 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
LETMD1-218ENST00000549340 CPS1P31327 1500 aa19.75■□□□□ 0.75
LETMD1-218ENST00000549340 TECPR2O15040 1411 aa19.75■□□□□ 0.75
LETMD1-218ENST00000549340 ANKRD36BQ8N2N9 1353 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms