RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.78
EFCAB2-215ENST00000549220 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
EFCAB2-215ENST00000549220 WDR97A6NE52 1622 aa10.15□□□□□ -0.79
EFCAB2-215ENST00000549220 SMAPO00193 183 aa10.14□□□□□ -0.79
EFCAB2-215ENST00000549220 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
EFCAB2-215ENST00000549220 PBRM1Q86U86 1689 aa10.14□□□□□ -0.79
EFCAB2-215ENST00000549220 RAD54L2Q9Y4B4 1467 aa10.13□□□□□ -0.79
EFCAB2-215ENST00000549220 CERKQ8TCT0 537 aa10.13□□□□□ -0.79
EFCAB2-215ENST00000549220 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
EFCAB2-215ENST00000549220 IFT140Q96RY7 1462 aa10.12□□□□□ -0.79
EFCAB2-215ENST00000549220 TOP2BQ02880 1626 aa10.12□□□□□ -0.79
EFCAB2-215ENST00000549220 A0A0G2JS52 829 aa10.12□□□□□ -0.79
EFCAB2-215ENST00000549220 RBM27Q9P2N5 1060 aaKnown RBP10.12□□□□□ -0.79
EFCAB2-215ENST00000549220 CHD1O14646 1710 aa10.12□□□□□ -0.79
EFCAB2-215ENST00000549220 WRNQ14191 1432 aaPredicted RBP eCLIP10.11□□□□□ -0.79
EFCAB2-215ENST00000549220 PACS2Q86VP3 889 aa10.11□□□□□ -0.79
EFCAB2-215ENST00000549220 TATDN2Q93075 761 aa10.11□□□□□ -0.79
EFCAB2-215ENST00000549220 SOGA1O94964 1423 aa10.09□□□□□ -0.79
EFCAB2-215ENST00000549220 NYAP1Q6ZVC0 841 aa10.08□□□□□ -0.8
EFCAB2-215ENST00000549220 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.08□□□□□ -0.8
EFCAB2-215ENST00000549220 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
EFCAB2-215ENST00000549220 SAMD7Q7Z3H4 446 aa10.07□□□□□ -0.8
EFCAB2-215ENST00000549220 HPS5Q9UPZ3 1129 aa10.07□□□□□ -0.8
EFCAB2-215ENST00000549220 AQRO60306 1485 aaKnown RBP eCLIP10.06□□□□□ -0.8
EFCAB2-215ENST00000549220 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
EFCAB2-215ENST00000549220 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
EFCAB2-215ENST00000549220 LRCH3Q96II8 777 aa10.05□□□□□ -0.8
EFCAB2-215ENST00000549220 EYA1Q99502 592 aa10.05□□□□□ -0.8
EFCAB2-215ENST00000549220 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
EFCAB2-215ENST00000549220 TDRD9Q8NDG6 1382 aaKnown RBP10.04□□□□□ -0.8
EFCAB2-215ENST00000549220 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
EFCAB2-215ENST00000549220 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
EFCAB2-215ENST00000549220 RGS20O76081 388 aa10.03□□□□□ -0.8
EFCAB2-215ENST00000549220 PTGDRQ13258 359 aa10.03□□□□□ -0.8
EFCAB2-215ENST00000549220 TJAP1Q5JTD0 557 aa10.02□□□□□ -0.81
EFCAB2-215ENST00000549220 NBPF26B4DH59 902 aa10.01□□□□□ -0.81
EFCAB2-215ENST00000549220 SEMA3EO15041 775 aa10.01□□□□□ -0.81
EFCAB2-215ENST00000549220 ABCA10Q8WWZ4 1543 aa10□□□□□ -0.81
EFCAB2-215ENST00000549220 GAPVD1Q14C86 1478 aa9.99□□□□□ -0.81
EFCAB2-215ENST00000549220 SNAPC4Q5SXM2 1469 aa9.99□□□□□ -0.81
EFCAB2-215ENST00000549220 APLP1P51693 650 aa9.97□□□□□ -0.81
EFCAB2-215ENST00000549220 KCNC4Q03721 635 aa9.97□□□□□ -0.81
EFCAB2-215ENST00000549220 PPP4CP60510 307 aa9.96□□□□□ -0.82
EFCAB2-215ENST00000549220 SWT1Q5T5J6 900 aaKnown RBP9.96□□□□□ -0.82
EFCAB2-215ENST00000549220 GRIN2BQ13224 1484 aa9.96□□□□□ -0.82
EFCAB2-215ENST00000549220 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
EFCAB2-215ENST00000549220 KDM2AQ9Y2K7 1162 aa9.95□□□□□ -0.82
EFCAB2-215ENST00000549220 ADGRG1Q9Y653 693 aa9.95□□□□□ -0.82
EFCAB2-215ENST00000549220 ADAMTS12P58397 1594 aa9.94□□□□□ -0.82
EFCAB2-215ENST00000549220 GPR37O15354 613 aa9.94□□□□□ -0.82
EFCAB2-215ENST00000549220 MAGI1Q96QZ7 1491 aaPredicted RBP9.93□□□□□ -0.82
EFCAB2-215ENST00000549220 P3H3Q8IVL6 736 aa9.93□□□□□ -0.82
EFCAB2-215ENST00000549220 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
EFCAB2-215ENST00000549220 MTRQ99707 1265 aa9.92□□□□□ -0.82
EFCAB2-215ENST00000549220 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
EFCAB2-215ENST00000549220 CUL7Q14999 1698 aa9.9□□□□□ -0.82
EFCAB2-215ENST00000549220 CHMP7Q8WUX9 453 aaPredicted RBP9.9□□□□□ -0.82
EFCAB2-215ENST00000549220 ERICH3Q5RHP9 1530 aa9.9□□□□□ -0.82
EFCAB2-215ENST00000549220 SYNJ2O15056 1496 aa9.9□□□□□ -0.83
EFCAB2-215ENST00000549220 KIF27Q86VH2 1401 aa9.89□□□□□ -0.83
EFCAB2-215ENST00000549220 TMEM134Q9H6X4 195 aa9.88□□□□□ -0.83
EFCAB2-215ENST00000549220 RUSC2Q8N2Y8 1516 aa9.87□□□□□ -0.83
EFCAB2-215ENST00000549220 RIMBP3CA6NJZ7 1639 aa9.87□□□□□ -0.83
EFCAB2-215ENST00000549220 RIMBP3BA6NNM3 1639 aa9.87□□□□□ -0.83
EFCAB2-215ENST00000549220 RIMBP3Q9UFD9 1639 aa9.87□□□□□ -0.83
EFCAB2-215ENST00000549220 RBM26Q5T8P6 1007 aaKnown RBP9.87□□□□□ -0.83
EFCAB2-215ENST00000549220 IL21Q9HBE4 155 aa9.87□□□□□ -0.83
EFCAB2-215ENST00000549220 FECHP22830 423 aa9.86□□□□□ -0.83
EFCAB2-215ENST00000549220 NKX2-3Q8TAU0 364 aa9.86□□□□□ -0.83
EFCAB2-215ENST00000549220 GRIN2AQ12879 1464 aa9.85□□□□□ -0.83
EFCAB2-215ENST00000549220 CEP170Q5SW79 1584 aa9.85□□□□□ -0.83
EFCAB2-215ENST00000549220 NUTM2FA1L443 756 aa9.85□□□□□ -0.83
EFCAB2-215ENST00000549220 RCCD1A6NED2 376 aa9.85□□□□□ -0.83
EFCAB2-215ENST00000549220 FHAD1B1AJZ9 1412 aa9.84□□□□□ -0.83
EFCAB2-215ENST00000549220 FCHSD2O94868 740 aa9.84□□□□□ -0.83
EFCAB2-215ENST00000549220 DNAJB2P25686 324 aa9.84□□□□□ -0.83
EFCAB2-215ENST00000549220 SLF2Q8IX21 1173 aa9.84□□□□□ -0.83
EFCAB2-215ENST00000549220 PXYLP1Q8TE99 480 aa9.84□□□□□ -0.83
EFCAB2-215ENST00000549220 CTTNBP2Q8WZ74 1663 aa9.83□□□□□ -0.84
EFCAB2-215ENST00000549220 CLASP1Q7Z460 1538 aa9.83□□□□□ -0.84
EFCAB2-215ENST00000549220 SLC10A3P09131 477 aa9.83□□□□□ -0.84
EFCAB2-215ENST00000549220 PPP1R18Q6NYC8 613 aa9.82□□□□□ -0.84
EFCAB2-215ENST00000549220 LCE2BO14633 110 aa9.81□□□□□ -0.84
EFCAB2-215ENST00000549220 FAM9AQ8IZU1 332 aaPredicted RBP9.81□□□□□ -0.84
EFCAB2-215ENST00000549220 RBM46Q8TBY0 533 aaKnown RBP9.81□□□□□ -0.84
EFCAB2-215ENST00000549220 IRX2Q9BZI1 471 aaPredicted RBP9.81□□□□□ -0.84
EFCAB2-215ENST00000549220 ARHGEF11O15085 1522 aa9.81□□□□□ -0.84
EFCAB2-215ENST00000549220 RNF40O75150 1001 aa9.8□□□□□ -0.84
EFCAB2-215ENST00000549220 HDGFP51858 240 aaKnown RBP9.8□□□□□ -0.84
EFCAB2-215ENST00000549220 HIC1Q14526 733 aa9.8□□□□□ -0.84
EFCAB2-215ENST00000549220 IGF1RP08069 1367 aa9.79□□□□□ -0.84
EFCAB2-215ENST00000549220 METTL3Q86U44 580 aaKnown RBP9.79□□□□□ -0.84
EFCAB2-215ENST00000549220 EMID1Q96A84 441 aaPredicted RBP9.79□□□□□ -0.84
EFCAB2-215ENST00000549220 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
EFCAB2-215ENST00000549220 CARMIL1Q5VZK9 1371 aa9.77□□□□□ -0.84
EFCAB2-215ENST00000549220 ZPR1O75312 459 aa9.77□□□□□ -0.85
EFCAB2-215ENST00000549220 COPS2P61201 443 aa9.77□□□□□ -0.85
EFCAB2-215ENST00000549220 BLOC1S3Q6QNY0 202 aa9.77□□□□□ -0.85
EFCAB2-215ENST00000549220 ERCC6L2Q5T890 1561 aa9.76□□□□□ -0.85
EFCAB2-215ENST00000549220 SHROOM2Q13796 1616 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms