RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 CLASP1Q7Z460 1538 aa12.09□□□□□ -0.47
CALCOCO1-210ENST00000548263 KDM6BO15054 1643 aa12.08□□□□□ -0.48
CALCOCO1-210ENST00000548263 RWDD1Q9H446 243 aaPredicted RBP12.08□□□□□ -0.48
CALCOCO1-210ENST00000548263 CCDC141Q6ZP82 1450 aa12.08□□□□□ -0.48
CALCOCO1-210ENST00000548263 E9PSI1 815 aa12.07□□□□□ -0.48
CALCOCO1-210ENST00000548263 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
CALCOCO1-210ENST00000548263 HSCBQ8IWL3 235 aa12.07□□□□□ -0.48
CALCOCO1-210ENST00000548263 PMFBP1Q8TBY8 1022 aa12.07□□□□□ -0.48
CALCOCO1-210ENST00000548263 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
CALCOCO1-210ENST00000548263 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.483e-6■■□□□ 12.1
CALCOCO1-210ENST00000548263 MINK1Q8N4C8 1332 aaPredicted RBP12.06□□□□□ -0.48
CALCOCO1-210ENST00000548263 NCLP19338 710 aaKnown RBP12.06□□□□□ -0.48
CALCOCO1-210ENST00000548263 PPP2R1AP30153 589 aa12.06□□□□□ -0.48
CALCOCO1-210ENST00000548263 PANK1Q8TE04 598 aa12.06□□□□□ -0.48
CALCOCO1-210ENST00000548263 MAPK8IP3Q9UPT6 1336 aa12.06□□□□□ -0.48
CALCOCO1-210ENST00000548263 HSP90AB1P08238 724 aaKnown RBP12.06□□□□□ -0.48
CALCOCO1-210ENST00000548263 CGNL1Q0VF96 1302 aa12.06□□□□□ -0.48
CALCOCO1-210ENST00000548263 BCAR3O75815 825 aa12.06□□□□□ -0.48
CALCOCO1-210ENST00000548263 SYCP2Q9BX26 1530 aa12.05□□□□□ -0.48
CALCOCO1-210ENST00000548263 DHX29Q7Z478 1369 aaKnown RBP12.05□□□□□ -0.48
CALCOCO1-210ENST00000548263 TRAPPC8Q9Y2L5 1435 aa12.04□□□□□ -0.48
CALCOCO1-210ENST00000548263 GOLGA6L3A6NEY3 463 aa12.04□□□□□ -0.48
CALCOCO1-210ENST00000548263 GOLGA6L22H0YM25 854 aa12.04□□□□□ -0.48
CALCOCO1-210ENST00000548263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.04□□□□□ -0.48
CALCOCO1-210ENST00000548263 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-210ENST00000548263 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
CALCOCO1-210ENST00000548263 MYH16Q9H6N6 1097 aa12.04□□□□□ -0.48
CALCOCO1-210ENST00000548263 ITPRIPQ8IWB1 547 aa12.03□□□□□ -0.48
CALCOCO1-210ENST00000548263 RNF123Q5XPI4 1314 aa12.02□□□□□ -0.49
CALCOCO1-210ENST00000548263 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
CALCOCO1-210ENST00000548263 CABP2Q9NPB3 220 aa12.01□□□□□ -0.49
CALCOCO1-210ENST00000548263 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
CALCOCO1-210ENST00000548263 LMOD2Q6P5Q4 547 aa12.01□□□□□ -0.49
CALCOCO1-210ENST00000548263 FBXO31Q5XUX0 539 aaPredicted RBP12□□□□□ -0.49
CALCOCO1-210ENST00000548263 SLC12A5Q9H2X9 1139 aa12□□□□□ -0.49
CALCOCO1-210ENST00000548263 CD109Q6YHK3 1445 aa12□□□□□ -0.49
CALCOCO1-210ENST00000548263 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
CALCOCO1-210ENST00000548263 FANCAO15360 1455 aa11.99□□□□□ -0.49
CALCOCO1-210ENST00000548263 ADGRL1O94910 1474 aa11.99□□□□□ -0.49
CALCOCO1-210ENST00000548263 ADGRF5Q8IZF2 1346 aa11.99□□□□□ -0.49
CALCOCO1-210ENST00000548263 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
CALCOCO1-210ENST00000548263 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
CALCOCO1-210ENST00000548263 PZPP20742 1482 aa11.97□□□□□ -0.49
CALCOCO1-210ENST00000548263 ASXL2Q76L83 1435 aa11.97□□□□□ -0.49
CALCOCO1-210ENST00000548263 DUSP27Q5VZP5 1158 aa11.97□□□□□ -0.49
CALCOCO1-210ENST00000548263 ERBINQ96RT1 1412 aa11.96□□□□□ -0.49
CALCOCO1-210ENST00000548263 SLFN5Q08AF3 891 aa11.96□□□□□ -0.49
CALCOCO1-210ENST00000548263 SPATA31E1Q6ZUB1 1445 aa11.96□□□□□ -0.5
CALCOCO1-210ENST00000548263 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
CALCOCO1-210ENST00000548263 GGNBP2Q9H3C7 697 aa11.95□□□□□ -0.5
CALCOCO1-210ENST00000548263 PLCH2O75038 1416 aa11.95□□□□□ -0.5
CALCOCO1-210ENST00000548263 LRRIQ1Q96JM4 1722 aa11.95□□□□□ -0.5
CALCOCO1-210ENST00000548263 ZKSCAN2Q63HK3 967 aa11.95□□□□□ -0.5
CALCOCO1-210ENST00000548263 TEX14Q8IWB6 1497 aa11.95□□□□□ -0.5
CALCOCO1-210ENST00000548263 IPO8O15397 1037 aaKnown RBP11.94□□□□□ -0.5
CALCOCO1-210ENST00000548263 GBP4Q96PP9 640 aa11.94□□□□□ -0.5
CALCOCO1-210ENST00000548263 PDE3AQ14432 1141 aa11.94□□□□□ -0.5
CALCOCO1-210ENST00000548263 TCP11L2Q8N4U5 519 aa11.93□□□□□ -0.5
CALCOCO1-210ENST00000548263 PDZRN3Q9UPQ7 1066 aa11.93□□□□□ -0.5
CALCOCO1-210ENST00000548263 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
CALCOCO1-210ENST00000548263 NGEFQ8N5V2 710 aa11.93□□□□□ -0.5
CALCOCO1-210ENST00000548263 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
CALCOCO1-210ENST00000548263 LRPPRCP42704 1394 aaKnown RBP11.93□□□□□ -0.5
CALCOCO1-210ENST00000548263 RUNDC1Q96C34 613 aa11.92□□□□□ -0.5
CALCOCO1-210ENST00000548263 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
CALCOCO1-210ENST00000548263 IDI1Q13907 227 aa11.92□□□□□ -0.5
CALCOCO1-210ENST00000548263 C22orf23Q9BZE7 217 aa11.92□□□□□ -0.5
CALCOCO1-210ENST00000548263 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-210ENST00000548263 PER1O15534 1290 aaPredicted RBP11.92□□□□□ -0.5
CALCOCO1-210ENST00000548263 DZIP1LQ8IYY4 767 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-210ENST00000548263 CHMP5Q9NZZ3 219 aa11.92□□□□□ -0.5
CALCOCO1-210ENST00000548263 APBB1O00213 710 aa11.91□□□□□ -0.5
CALCOCO1-210ENST00000548263 CEBPAP49715 358 aaPredicted RBP11.91□□□□□ -0.5
CALCOCO1-210ENST00000548263 PARD3Q8TEW0 1356 aa11.91□□□□□ -0.5
CALCOCO1-210ENST00000548263 PRAM1Q96QH2 718 aa11.91□□□□□ -0.5
CALCOCO1-210ENST00000548263 RALGAPBQ86X10 1494 aa11.9□□□□□ -0.5
CALCOCO1-210ENST00000548263 ITSN2Q9NZM3 1697 aa11.9□□□□□ -0.5
CALCOCO1-210ENST00000548263 IGHDP01880 384 aa11.9□□□□□ -0.5
CALCOCO1-210ENST00000548263 MTHFSP49914 203 aa11.9□□□□□ -0.5
CALCOCO1-210ENST00000548263 C8orf34Q49A92 452 aa11.9□□□□□ -0.5
CALCOCO1-210ENST00000548263 FAM43AQ8N2R8 423 aa11.9□□□□□ -0.5
CALCOCO1-210ENST00000548263 FAM135AQ9P2D6 1515 aa11.9□□□□□ -0.5
CALCOCO1-210ENST00000548263 ABCC2Q92887 1545 aa11.9□□□□□ -0.51
CALCOCO1-210ENST00000548263 PTMAP06454 111 aaKnown RBP11.89□□□□□ -0.51
CALCOCO1-210ENST00000548263 CHMP4BQ9H444 224 aaKnown RBP11.89□□□□□ -0.51
CALCOCO1-210ENST00000548263 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
CALCOCO1-210ENST00000548263 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO1-210ENST00000548263 MSNP26038 577 aaKnown RBP11.89□□□□□ -0.51
CALCOCO1-210ENST00000548263 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 HDGFL2Q7Z4V5 671 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 SLC26A8Q96RN1 970 aa11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 ABCC10Q5T3U5 1492 aa11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 FBLN1P23142 703 aa11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 ANKRD45Q5TZF3 282 aa11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 WAPLQ7Z5K2 1190 aa11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 RBM33Q96EV2 1170 aaKnown RBP11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 TRAK2O60296 914 aa11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 WWC1Q8IX03 1113 aa11.88□□□□□ -0.51
CALCOCO1-210ENST00000548263 WDR7Q9Y4E6 1490 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms