RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RAB3GAP2Q9H2M9 1393 aa17.65■□□□□ 0.42
RAB5C-204ENST00000547517 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.42
RAB5C-204ENST00000547517 CPS1P31327 1500 aa17.62■□□□□ 0.41
RAB5C-204ENST00000547517 PPP1R15AO75807 674 aaPredicted RBP17.61■□□□□ 0.41
RAB5C-204ENST00000547517 FOXD1Q16676 465 aa17.61■□□□□ 0.41
RAB5C-204ENST00000547517 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
RAB5C-204ENST00000547517 IQSEC2Q5JU85 1478 aa17.6■□□□□ 0.41
RAB5C-204ENST00000547517 STRCP1A6NGW2 1772 aa17.59■□□□□ 0.41
RAB5C-204ENST00000547517 MPHOSPH9Q99550 1183 aa17.59■□□□□ 0.41
RAB5C-204ENST00000547517 PLEKHG1Q9ULL1 1385 aa17.58■□□□□ 0.4
RAB5C-204ENST00000547517 NUTM2DQ5VT03 806 aaPredicted RBP17.58■□□□□ 0.4
RAB5C-204ENST00000547517 BCANQ96GW7 911 aa17.58■□□□□ 0.4
RAB5C-204ENST00000547517 KIF1BO60333 1816 aa17.58■□□□□ 0.4
RAB5C-204ENST00000547517 ACIN1Q9UKV3 1341 aaKnown RBP17.57■□□□□ 0.4
RAB5C-204ENST00000547517 HDGFP51858 240 aaKnown RBP17.56■□□□□ 0.4
RAB5C-204ENST00000547517 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
RAB5C-204ENST00000547517 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.56■□□□□ 0.4
RAB5C-204ENST00000547517 SLC26A8Q96RN1 970 aa17.56■□□□□ 0.4
RAB5C-204ENST00000547517 NEXMIFQ5QGS0 1516 aa17.54■□□□□ 0.4
RAB5C-204ENST00000547517 CCDC144AA2RUR9 1427 aa17.54■□□□□ 0.4
RAB5C-204ENST00000547517 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.39
RAB5C-204ENST00000547517 DIP2AQ14689 1571 aa17.51■□□□□ 0.39
RAB5C-204ENST00000547517 NWD1Q149M9 1564 aa17.51■□□□□ 0.39
RAB5C-204ENST00000547517 ADAMTS13Q76LX8 1427 aa17.5■□□□□ 0.39
RAB5C-204ENST00000547517 NRXN3Q9Y4C0 1643 aa17.49■□□□□ 0.39
RAB5C-204ENST00000547517 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
RAB5C-204ENST00000547517 UBAP1LF5GYI3 381 aa17.47■□□□□ 0.39
RAB5C-204ENST00000547517 NKTRP30414 1462 aaKnown RBP17.47■□□□□ 0.39
RAB5C-204ENST00000547517 PPLO60437 1756 aa17.46■□□□□ 0.39
RAB5C-204ENST00000547517 KCNA6P17658 529 aa17.46■□□□□ 0.39
RAB5C-204ENST00000547517 HRCP23327 699 aa17.45■□□□□ 0.38
RAB5C-204ENST00000547517 TBX22Q9Y458 520 aa17.45■□□□□ 0.38
RAB5C-204ENST00000547517 SPATA31E1Q6ZUB1 1445 aa17.45■□□□□ 0.38
RAB5C-204ENST00000547517 CHD2O14647 1828 aaKnown RBP17.44■□□□□ 0.38
RAB5C-204ENST00000547517 XIRP1Q702N8 1843 aaKnown RBP17.44■□□□□ 0.38
RAB5C-204ENST00000547517 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
RAB5C-204ENST00000547517 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
RAB5C-204ENST00000547517 RPGRIP1LQ68CZ1 1315 aa17.42■□□□□ 0.38
RAB5C-204ENST00000547517 PIK3R4Q99570 1358 aa17.41■□□□□ 0.38
RAB5C-204ENST00000547517 IFT172Q9UG01 1749 aa17.41■□□□□ 0.38
RAB5C-204ENST00000547517 ALKQ9UM73 1620 aa17.41■□□□□ 0.38
RAB5C-204ENST00000547517 RBM33Q96EV2 1170 aaKnown RBP17.41■□□□□ 0.38
RAB5C-204ENST00000547517 SCAF1Q9H7N4 1312 aaKnown RBP17.41■□□□□ 0.38
RAB5C-204ENST00000547517 VGFO15240 615 aaPredicted RBP17.4■□□□□ 0.38
RAB5C-204ENST00000547517 PROSER2Q86WR7 435 aaPredicted RBP17.4■□□□□ 0.38
RAB5C-204ENST00000547517 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
RAB5C-204ENST00000547517 PTPRUQ92729 1446 aa17.39■□□□□ 0.38
RAB5C-204ENST00000547517 XRN1Q8IZH2 1706 aaKnown RBP17.39■□□□□ 0.37
RAB5C-204ENST00000547517 TOM1O60784 492 aa17.39■□□□□ 0.37
RAB5C-204ENST00000547517 PIP4K2BP78356 416 aa17.39■□□□□ 0.37
RAB5C-204ENST00000547517 METP08581 1390 aa17.39■□□□□ 0.37
RAB5C-204ENST00000547517 SETD1AO15047 1707 aaKnown RBP17.38■□□□□ 0.37
RAB5C-204ENST00000547517 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
RAB5C-204ENST00000547517 ADGRF5Q8IZF2 1346 aa17.35■□□□□ 0.37
RAB5C-204ENST00000547517 MSH6P52701 1360 aa17.33■□□□□ 0.36
RAB5C-204ENST00000547517 MYOM2P54296 1465 aa17.32■□□□□ 0.36
RAB5C-204ENST00000547517 PIK3C2GO75747 1445 aa17.32■□□□□ 0.36
RAB5C-204ENST00000547517 TRIM26Q12899 539 aaPredicted RBP17.32■□□□□ 0.36
RAB5C-204ENST00000547517 C14orf37Q86TY3 774 aa17.32■□□□□ 0.36
RAB5C-204ENST00000547517 NCOA3Q9Y6Q9 1424 aa17.3■□□□□ 0.36
RAB5C-204ENST00000547517 NRXN1Q9ULB1 1477 aa17.29■□□□□ 0.36
RAB5C-204ENST00000547517 PTCH1Q13635 1447 aa17.29■□□□□ 0.36
RAB5C-204ENST00000547517 ASXL1Q8IXJ9 1541 aa17.28■□□□□ 0.36
RAB5C-204ENST00000547517 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.36
RAB5C-204ENST00000547517 LAMC1P11047 1609 aa17.27■□□□□ 0.36
RAB5C-204ENST00000547517 HSPA1LP34931 641 aa17.26■□□□□ 0.35
RAB5C-204ENST00000547517 PRAG1Q86YV5 1406 aa17.26■□□□□ 0.35
RAB5C-204ENST00000547517 NALCNQ8IZF0 1738 aa17.26■□□□□ 0.35
RAB5C-204ENST00000547517 ROBO2Q9HCK4 1378 aa17.26■□□□□ 0.35
RAB5C-204ENST00000547517 ROBO1Q9Y6N7 1651 aa17.25■□□□□ 0.35
RAB5C-204ENST00000547517 ADGRL3Q9HAR2 1447 aa17.24■□□□□ 0.35
RAB5C-204ENST00000547517 C19orf44Q9H6X5 657 aa17.23■□□□□ 0.35
RAB5C-204ENST00000547517 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
RAB5C-204ENST00000547517 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
RAB5C-204ENST00000547517 DCCP43146 1447 aa17.22■□□□□ 0.35
RAB5C-204ENST00000547517 ATF3P18847 181 aa17.22■□□□□ 0.35
RAB5C-204ENST00000547517 TMEM132EQ6IEE7 984 aa17.22■□□□□ 0.35
RAB5C-204ENST00000547517 DCAF11Q8TEB1 546 aa17.22■□□□□ 0.35
RAB5C-204ENST00000547517 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
RAB5C-204ENST00000547517 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
RAB5C-204ENST00000547517 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.35
RAB5C-204ENST00000547517 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
RAB5C-204ENST00000547517 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
RAB5C-204ENST00000547517 STK26Q9P289 416 aa17.21■□□□□ 0.35
RAB5C-204ENST00000547517 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
RAB5C-204ENST00000547517 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
RAB5C-204ENST00000547517 TECPR2O15040 1411 aa17.2■□□□□ 0.34
RAB5C-204ENST00000547517 YTHDC2Q9H6S0 1430 aaKnown RBP17.2■□□□□ 0.34
RAB5C-204ENST00000547517 ADGRB1O14514 1584 aa17.17■□□□□ 0.34
RAB5C-204ENST00000547517 MST1RQ04912 1400 aa17.17■□□□□ 0.34
RAB5C-204ENST00000547517 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
RAB5C-204ENST00000547517 PLEKHH1Q9ULM0 1364 aa17.15■□□□□ 0.34
RAB5C-204ENST00000547517 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
RAB5C-204ENST00000547517 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
RAB5C-204ENST00000547517 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
RAB5C-204ENST00000547517 CDC42BPGQ6DT37 1551 aa17.14■□□□□ 0.33
RAB5C-204ENST00000547517 NEUROD1Q13562 356 aa17.13■□□□□ 0.33
RAB5C-204ENST00000547517 WAPLQ7Z5K2 1190 aa17.13■□□□□ 0.33
RAB5C-204ENST00000547517 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
RAB5C-204ENST00000547517 AHDC1Q5TGY3 1603 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms