RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 NPC1L1Q9UHC9 1359 aa28.74■■■□□ 2.19
CACNB3-205ENST00000547392 MYOM1P52179 1685 aa28.73■■■□□ 2.19
CACNB3-205ENST00000547392 KNSTRNQ9Y448 316 aa28.73■■■□□ 2.19
CACNB3-205ENST00000547392 AMER1Q5JTC6 1135 aaPredicted RBP28.72■■■□□ 2.19
CACNB3-205ENST00000547392 SALL2Q9Y467 1007 aaPredicted RBP28.71■■■□□ 2.19
CACNB3-205ENST00000547392 MAP3K4Q9Y6R4 1608 aa28.71■■■□□ 2.19
CACNB3-205ENST00000547392 ASXL1Q8IXJ9 1541 aa28.71■■■□□ 2.19
CACNB3-205ENST00000547392 ERICH6Q7L0X2 663 aa28.7■■■□□ 2.19
CACNB3-205ENST00000547392 KIF3BO15066 747 aa28.7■■■□□ 2.18
CACNB3-205ENST00000547392 CDCA7LQ96GN5 454 aa28.7■■■□□ 2.18
CACNB3-205ENST00000547392 SLC24A1O60721 1099 aa28.69■■■□□ 2.18
CACNB3-205ENST00000547392 PPP2R1AP30153 589 aa28.69■■■□□ 2.18
CACNB3-205ENST00000547392 EXOC6Q8TAG9 804 aa28.69■■■□□ 2.18
CACNB3-205ENST00000547392 KIF1BO60333 1816 aa28.68■■■□□ 2.18
CACNB3-205ENST00000547392 EFCAB6Q5THR3 1501 aa28.68■■■□□ 2.18
CACNB3-205ENST00000547392 KDM5AP29375 1690 aaKnown RBP28.68■■■□□ 2.18
CACNB3-205ENST00000547392 LMTK2Q8IWU2 1503 aa28.68■■■□□ 2.18
CACNB3-205ENST00000547392 IFT172Q9UG01 1749 aa28.68■■■□□ 2.18
CACNB3-205ENST00000547392 PIK3C2GO75747 1445 aa28.67■■■□□ 2.18
CACNB3-205ENST00000547392 KIDINS220Q9ULH0 1771 aa28.66■■■□□ 2.18
CACNB3-205ENST00000547392 ABCA6Q8N139 1617 aa28.65■■■□□ 2.18
CACNB3-205ENST00000547392 ADAMTS8Q9UP79 889 aa28.64■■■□□ 2.18
CACNB3-205ENST00000547392 NPM1P06748 294 aaKnown RBP eCLIP28.63■■■□□ 2.17
CACNB3-205ENST00000547392 NRXN1Q9ULB1 1477 aa28.62■■■□□ 2.17
CACNB3-205ENST00000547392 PPRC1Q5VV67 1664 aaKnown RBP28.61■■■□□ 2.17
CACNB3-205ENST00000547392 MYO3AQ8NEV4 1616 aa28.59■■■□□ 2.17
CACNB3-205ENST00000547392 UGGT1Q9NYU2 1555 aa28.59■■■□□ 2.17
CACNB3-205ENST00000547392 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
CACNB3-205ENST00000547392 WDR43Q15061 677 aaKnown RBP eCLIP28.57■■■□□ 2.16
CACNB3-205ENST00000547392 ERVK-7P63135 1459 aa28.57■■■□□ 2.16
CACNB3-205ENST00000547392 MROH2AA6NES4 1674 aa28.57■■■□□ 2.16
CACNB3-205ENST00000547392 TCERG1O14776 1098 aaKnown RBP28.57■■■□□ 2.16
CACNB3-205ENST00000547392 MYT1LQ9UL68 1186 aa28.57■■■□□ 2.16
CACNB3-205ENST00000547392 ZNF521Q96K83 1311 aa28.55■■■□□ 2.16
CACNB3-205ENST00000547392 CYB5RLQ6IPT4 315 aa28.55■■■□□ 2.16
CACNB3-205ENST00000547392 SBNO2Q9Y2G9 1366 aa28.54■■■□□ 2.16
CACNB3-205ENST00000547392 CFAP70Q5T0N1 1121 aa28.54■■■□□ 2.16
CACNB3-205ENST00000547392 ADGRF5Q8IZF2 1346 aa28.54■■■□□ 2.16
CACNB3-205ENST00000547392 ADGRB3O60242 1522 aa28.53■■■□□ 2.16
CACNB3-205ENST00000547392 CFAP74Q9C0B2 1584 aa28.53■■■□□ 2.16
CACNB3-205ENST00000547392 SETBP1Q9Y6X0 1596 aa28.53■■■□□ 2.16
CACNB3-205ENST00000547392 NOP58Q9Y2X3 529 aaKnown RBP28.53■■■□□ 2.16
CACNB3-205ENST00000547392 PLEKHH1Q9ULM0 1364 aa28.52■■■□□ 2.16
CACNB3-205ENST00000547392 MS4A1P11836 297 aa28.5■■■□□ 2.15
CACNB3-205ENST00000547392 ANP32AP39687 249 aaKnown RBP28.5■■■□□ 2.15
CACNB3-205ENST00000547392 DUSP27Q5VZP5 1158 aa28.48■■■□□ 2.15
CACNB3-205ENST00000547392 MLH3Q9UHC1 1453 aa28.48■■■□□ 2.15
CACNB3-205ENST00000547392 IPO9Q96P70 1041 aaKnown RBP28.47■■■□□ 2.15
CACNB3-205ENST00000547392 PLIN1O60240 522 aa28.46■■■□□ 2.15
CACNB3-205ENST00000547392 CRBNQ96SW2 442 aa28.45■■■□□ 2.15
CACNB3-205ENST00000547392 CD109Q6YHK3 1445 aa28.45■■■□□ 2.15
CACNB3-205ENST00000547392 POGZQ7Z3K3 1410 aa28.45■■■□□ 2.15
CACNB3-205ENST00000547392 GOLGA2Q08379 1002 aa28.45■■■□□ 2.14
CACNB3-205ENST00000547392 PPLO60437 1756 aa28.44■■■□□ 2.14
CACNB3-205ENST00000547392 FRMPD1Q5SYB0 1578 aa28.44■■■□□ 2.14
CACNB3-205ENST00000547392 NOS1P29475 1434 aa28.42■■■□□ 2.14
CACNB3-205ENST00000547392 TRMT2AQ8IZ69 625 aaKnown RBP28.41■■■□□ 2.14
CACNB3-205ENST00000547392 NPATQ14207 1427 aa28.4■■■□□ 2.14
CACNB3-205ENST00000547392 HECW2Q9P2P5 1572 aa28.4■■■□□ 2.14
CACNB3-205ENST00000547392 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
CACNB3-205ENST00000547392 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
CACNB3-205ENST00000547392 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
CACNB3-205ENST00000547392 ZC3H13Q5T200 1668 aaKnown RBP28.4■■■□□ 2.14
CACNB3-205ENST00000547392 SLFN5Q08AF3 891 aa28.4■■■□□ 2.14
CACNB3-205ENST00000547392 NGEFQ8N5V2 710 aa28.4■■■□□ 2.14
CACNB3-205ENST00000547392 CARD14Q9BXL6 1004 aa28.4■■■□□ 2.14
CACNB3-205ENST00000547392 PAK3O75914 559 aaPredicted RBP28.37■■■□□ 2.13
CACNB3-205ENST00000547392 RPGRIP1LQ68CZ1 1315 aa28.37■■■□□ 2.13
CACNB3-205ENST00000547392 CENPJQ9HC77 1338 aaPredicted RBP28.37■■■□□ 2.13
CACNB3-205ENST00000547392 PDE4AP27815 886 aa28.37■■■□□ 2.13
CACNB3-205ENST00000547392 BACH2Q9BYV9 841 aa28.36■■■□□ 2.13
CACNB3-205ENST00000547392 C14orf93Q9H972 538 aaKnown RBP28.36■■■□□ 2.13
CACNB3-205ENST00000547392 ADGRB1O14514 1584 aa28.36■■■□□ 2.13
CACNB3-205ENST00000547392 POLR3AO14802 1390 aaPredicted RBP28.34■■■□□ 2.13
CACNB3-205ENST00000547392 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.34■■■□□ 2.13
CACNB3-205ENST00000547392 ABCC3O15438 1527 aa28.33■■■□□ 2.13
CACNB3-205ENST00000547392 QRICH2Q9H0J4 1663 aa28.33■■■□□ 2.13
CACNB3-205ENST00000547392 C20orf194Q5TEA3 1177 aa28.33■■■□□ 2.12
CACNB3-205ENST00000547392 KDM2BQ8NHM5 1336 aa28.31■■■□□ 2.12
CACNB3-205ENST00000547392 ZBTB47Q9UFB7 747 aaPredicted RBP28.31■■■□□ 2.12
CACNB3-205ENST00000547392 USP32Q8NFA0 1604 aa28.29■■■□□ 2.12
CACNB3-205ENST00000547392 NKTRP30414 1462 aaKnown RBP28.29■■■□□ 2.12
CACNB3-205ENST00000547392 CAMSAP1Q5T5Y3 1602 aa28.29■■■□□ 2.12
CACNB3-205ENST00000547392 APAF1O14727 1248 aa28.28■■■□□ 2.12
CACNB3-205ENST00000547392 CCDC146Q8IYE0 955 aa28.28■■■□□ 2.12
CACNB3-205ENST00000547392 RAPGEF3O95398 923 aa28.27■■■□□ 2.12
CACNB3-205ENST00000547392 PIK3C2BO00750 1634 aa28.27■■■□□ 2.12
CACNB3-205ENST00000547392 NEO1Q92859 1461 aa28.27■■■□□ 2.12
CACNB3-205ENST00000547392 E9PSI1 815 aa28.26■■■□□ 2.11
CACNB3-205ENST00000547392 CFAP65Q6ZU64 1925 aaKnown RBP28.26■■■□□ 2.11
CACNB3-205ENST00000547392 CHGAP10645 457 aaKnown RBP28.26■■■□□ 2.11
CACNB3-205ENST00000547392 CENPQQ7L2Z9 268 aaPredicted RBP28.26■■■□□ 2.11
CACNB3-205ENST00000547392 PUS7Q96PZ0 661 aaKnown RBP28.26■■■□□ 2.11
CACNB3-205ENST00000547392 GGT6Q6P531 493 aa28.24■■■□□ 2.11
CACNB3-205ENST00000547392 NSD3Q9BZ95 1437 aa28.24■■■□□ 2.11
CACNB3-205ENST00000547392 SHPRHQ149N8 1683 aa28.23■■■□□ 2.11
CACNB3-205ENST00000547392 TRAK1Q9UPV9 953 aa28.23■■■□□ 2.11
CACNB3-205ENST00000547392 SIGLEC1Q9BZZ2 1709 aa28.23■■■□□ 2.11
CACNB3-205ENST00000547392 SPINK5Q9NQ38 1064 aaPredicted RBP28.21■■■□□ 2.11
CACNB3-205ENST00000547392 ARHGAP31Q2M1Z3 1444 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms