RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 DMRT2Q9Y5R5 561 aa33.71■■■□□ 2.99
SMARCD1-203ENST00000547247 RIMS2Q9UQ26 1411 aa33.7■■■□□ 2.99
SMARCD1-203ENST00000547247 SIN3AQ96ST3 1273 aa33.7■■■□□ 2.99
SMARCD1-203ENST00000547247 ZFYVE9O95405 1425 aa33.69■■■□□ 2.98
SMARCD1-203ENST00000547247 CCER1Q8TC90 406 aaPredicted RBP33.68■■■□□ 2.98
SMARCD1-203ENST00000547247 LTKP29376 864 aa33.68■■■□□ 2.98
SMARCD1-203ENST00000547247 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.68■■■□□ 2.98
SMARCD1-203ENST00000547247 RPGRIP1LQ68CZ1 1315 aa33.67■■■□□ 2.98
SMARCD1-203ENST00000547247 SCAF11Q99590 1463 aaKnown RBP33.67■■■□□ 2.98
SMARCD1-203ENST00000547247 CLSPNQ9HAW4 1339 aa33.65■■■□□ 2.98
SMARCD1-203ENST00000547247 NEUROD1Q13562 356 aa33.64■■■□□ 2.98
SMARCD1-203ENST00000547247 PPP1R15AO75807 674 aaPredicted RBP33.63■■■□□ 2.97
SMARCD1-203ENST00000547247 NUTM2DQ5VT03 806 aaPredicted RBP33.62■■■□□ 2.97
SMARCD1-203ENST00000547247 NEXMIFQ5QGS0 1516 aa33.62■■■□□ 2.97
SMARCD1-203ENST00000547247 MED14O60244 1454 aa33.59■■■□□ 2.97
SMARCD1-203ENST00000547247 VGFO15240 615 aaPredicted RBP33.57■■■□□ 2.96
SMARCD1-203ENST00000547247 NPHP4O75161 1426 aaPredicted RBP33.56■■■□□ 2.96
SMARCD1-203ENST00000547247 PPLO60437 1756 aa33.55■■■□□ 2.96
SMARCD1-203ENST00000547247 IQGAP1P46940 1657 aa33.54■■■□□ 2.96
SMARCD1-203ENST00000547247 PLEKHG1Q9ULL1 1385 aa33.53■■■□□ 2.96
SMARCD1-203ENST00000547247 IFT172Q9UG01 1749 aa33.52■■■□□ 2.96
SMARCD1-203ENST00000547247 DCAF11Q8TEB1 546 aa33.51■■■□□ 2.95
SMARCD1-203ENST00000547247 BCANQ96GW7 911 aa33.51■■■□□ 2.95
SMARCD1-203ENST00000547247 STAC3Q96MF2 364 aa33.49■■■□□ 2.95
SMARCD1-203ENST00000547247 SENP3Q9H4L4 574 aaPredicted RBP33.48■■■□□ 2.95
SMARCD1-203ENST00000547247 L3MBTL2Q969R5 705 aa33.46■■■□□ 2.95
SMARCD1-203ENST00000547247 KDM2AQ9Y2K7 1162 aa33.46■■■□□ 2.95
SMARCD1-203ENST00000547247 ADGRF5Q8IZF2 1346 aa33.46■■■□□ 2.95
SMARCD1-203ENST00000547247 MYOM2P54296 1465 aa33.45■■■□□ 2.95
SMARCD1-203ENST00000547247 TONSLQ96HA7 1378 aa33.44■■■□□ 2.94
SMARCD1-203ENST00000547247 SLC26A8Q96RN1 970 aa33.42■■■□□ 2.94
SMARCD1-203ENST00000547247 SETBP1Q9Y6X0 1596 aa33.41■■■□□ 2.94
SMARCD1-203ENST00000547247 ZNF335Q9H4Z2 1342 aaPredicted RBP33.39■■■□□ 2.94
SMARCD1-203ENST00000547247 ADAMTS13Q76LX8 1427 aa33.38■■■□□ 2.93
SMARCD1-203ENST00000547247 NRXN1Q9ULB1 1477 aa33.38■■■□□ 2.93
SMARCD1-203ENST00000547247 TBX22Q9Y458 520 aa33.37■■■□□ 2.93
SMARCD1-203ENST00000547247 LTBP4Q8N2S1 1624 aa33.37■■■□□ 2.93
SMARCD1-203ENST00000547247 NRXN3Q9Y4C0 1643 aa33.37■■■□□ 2.93
SMARCD1-203ENST00000547247 PIK3C2GO75747 1445 aa33.36■■■□□ 2.93
SMARCD1-203ENST00000547247 DIP2AQ14689 1571 aa33.34■■■□□ 2.93
SMARCD1-203ENST00000547247 TIMELESSQ9UNS1 1208 aa33.33■■■□□ 2.93
SMARCD1-203ENST00000547247 ALKQ9UM73 1620 aa33.3■■■□□ 2.92
SMARCD1-203ENST00000547247 CERKQ8TCT0 537 aa33.28■■■□□ 2.92
SMARCD1-203ENST00000547247 C14orf93Q9H972 538 aaKnown RBP33.28■■■□□ 2.92
SMARCD1-203ENST00000547247 PRAG1Q86YV5 1406 aa33.27■■■□□ 2.92
SMARCD1-203ENST00000547247 CFAP70Q5T0N1 1121 aa33.26■■■□□ 2.91
SMARCD1-203ENST00000547247 PIK3R4Q99570 1358 aa33.25■■■□□ 2.91
SMARCD1-203ENST00000547247 STRCP1A6NGW2 1772 aa33.24■■■□□ 2.91
SMARCD1-203ENST00000547247 METP08581 1390 aa33.23■■■□□ 2.91
SMARCD1-203ENST00000547247 SETD1AO15047 1707 aaKnown RBP33.23■■■□□ 2.91
SMARCD1-203ENST00000547247 LAMC1P11047 1609 aa33.23■■■□□ 2.91
SMARCD1-203ENST00000547247 KCNA6P17658 529 aa33.2■■■□□ 2.91
SMARCD1-203ENST00000547247 CPS1P31327 1500 aa33.2■■■□□ 2.9
SMARCD1-203ENST00000547247 CHD2O14647 1828 aaKnown RBP33.17■■■□□ 2.9
SMARCD1-203ENST00000547247 TMEM132EQ6IEE7 984 aa33.17■■■□□ 2.9
SMARCD1-203ENST00000547247 NBPF8Q3BBV2 869 aa33.16■■■□□ 2.9
SMARCD1-203ENST00000547247 PTPRUQ92729 1446 aa33.15■■■□□ 2.9
SMARCD1-203ENST00000547247 AMOTL2Q9Y2J4 779 aa33.15■■■□□ 2.9
SMARCD1-203ENST00000547247 KIAA1210Q9ULL0 1709 aa33.14■■■□□ 2.9
SMARCD1-203ENST00000547247 NWD1Q149M9 1564 aa33.13■■■□□ 2.89
SMARCD1-203ENST00000547247 ASXL1Q8IXJ9 1541 aa33.12■■■□□ 2.89
SMARCD1-203ENST00000547247 IQSEC2Q5JU85 1478 aa33.11■■■□□ 2.89
SMARCD1-203ENST00000547247 ADGRB1O14514 1584 aa33.09■■■□□ 2.89
SMARCD1-203ENST00000547247 NBPF1Q3BBV0 1214 aa33.09■■■□□ 2.89
SMARCD1-203ENST00000547247 TRPM1Q7Z4N2 1603 aa33.08■■■□□ 2.89
SMARCD1-203ENST00000547247 NKTRP30414 1462 aaKnown RBP33.08■■■□□ 2.89
SMARCD1-203ENST00000547247 LRPPRCP42704 1394 aaKnown RBP33.07■■■□□ 2.89
SMARCD1-203ENST00000547247 YTHDC2Q9H6S0 1430 aaKnown RBP33.07■■■□□ 2.88
SMARCD1-203ENST00000547247 XRN1Q8IZH2 1706 aaKnown RBP33.07■■■□□ 2.88
SMARCD1-203ENST00000547247 STK26Q9P289 416 aa33.07■■■□□ 2.88
SMARCD1-203ENST00000547247 LRRC7Q96NW7 1537 aa33.06■■■□□ 2.88
SMARCD1-203ENST00000547247 ABCC11Q96J66 1382 aa33.04■■■□□ 2.88
SMARCD1-203ENST00000547247 ROCK2O75116 1388 aaKnown RBP33.03■■■□□ 2.88
SMARCD1-203ENST00000547247 PROSER2Q86WR7 435 aaPredicted RBP33.03■■■□□ 2.88
SMARCD1-203ENST00000547247 FBXO41Q8TF61 875 aa33.02■■■□□ 2.88
SMARCD1-203ENST00000547247 RALGAPBQ86X10 1494 aa33.01■■■□□ 2.87
SMARCD1-203ENST00000547247 XIRP1Q702N8 1843 aaKnown RBP33■■■□□ 2.87
SMARCD1-203ENST00000547247 TECPR2O15040 1411 aa33■■■□□ 2.87
SMARCD1-203ENST00000547247 PTCH1Q13635 1447 aa32.99■■■□□ 2.87
SMARCD1-203ENST00000547247 ROBO2Q9HCK4 1378 aa32.98■■■□□ 2.87
SMARCD1-203ENST00000547247 KNDC1Q76NI1 1749 aa32.97■■■□□ 2.87
SMARCD1-203ENST00000547247 TRAK1Q9UPV9 953 aa32.97■■■□□ 2.87
SMARCD1-203ENST00000547247 GPRASP1Q5JY77 1395 aa32.96■■■□□ 2.87
SMARCD1-203ENST00000547247 ILDR1Q86SU0 546 aaPredicted RBP32.96■■■□□ 2.87
SMARCD1-203ENST00000547247 TMEM94Q12767 1356 aa32.95■■■□□ 2.87
SMARCD1-203ENST00000547247 SIRT1Q96EB6 747 aa32.95■■■□□ 2.86
SMARCD1-203ENST00000547247 RBM33Q96EV2 1170 aaKnown RBP32.94■■■□□ 2.86
SMARCD1-203ENST00000547247 CARD11Q9BXL7 1154 aa32.93■■■□□ 2.86
SMARCD1-203ENST00000547247 DLC1Q96QB1 1528 aa32.92■■■□□ 2.86
SMARCD1-203ENST00000547247 FAM135BQ49AJ0 1406 aa32.91■■■□□ 2.86
SMARCD1-203ENST00000547247 NCOA3Q9Y6Q9 1424 aa32.9■■■□□ 2.86
SMARCD1-203ENST00000547247 WAPLQ7Z5K2 1190 aa32.89■■■□□ 2.86
SMARCD1-203ENST00000547247 PRAM1Q96QH2 718 aa32.88■■■□□ 2.85
SMARCD1-203ENST00000547247 UBAP1LF5GYI3 381 aa32.87■■■□□ 2.85
SMARCD1-203ENST00000547247 POGKQ9P215 609 aa32.87■■■□□ 2.85
SMARCD1-203ENST00000547247 C14orf37Q86TY3 774 aa32.87■■■□□ 2.85
SMARCD1-203ENST00000547247 PLEKHH1Q9ULM0 1364 aa32.85■■■□□ 2.85
SMARCD1-203ENST00000547247 ARHGEF28Q8N1W1 1705 aaKnown RBP32.84■■■□□ 2.85
SMARCD1-203ENST00000547247 SAFB2Q14151 953 aaKnown RBP eCLIP32.81■■■□□ 2.84
SMARCD1-203ENST00000547247 MSH6P52701 1360 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms