RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 SLC52A1Q9NWF4 448 aa24.16■■□□□ 1.46
ARFGAP1-220ENST00000547204 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
ARFGAP1-220ENST00000547204 NPHP4O75161 1426 aaPredicted RBP24.12■■□□□ 1.45
ARFGAP1-220ENST00000547204 DCAF11Q8TEB1 546 aa24.12■■□□□ 1.45
ARFGAP1-220ENST00000547204 MED14O60244 1454 aa24.12■■□□□ 1.45
ARFGAP1-220ENST00000547204 IDI1Q13907 227 aa24.1■■□□□ 1.45
ARFGAP1-220ENST00000547204 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
ARFGAP1-220ENST00000547204 CHGAP10645 457 aaKnown RBP24.09■■□□□ 1.45
ARFGAP1-220ENST00000547204 IFT172Q9UG01 1749 aa24.08■■□□□ 1.45
ARFGAP1-220ENST00000547204 TMEM131LA2VDJ0 1609 aa24.08■■□□□ 1.44
ARFGAP1-220ENST00000547204 NBPF8Q3BBV2 869 aa24.08■■□□□ 1.44
ARFGAP1-220ENST00000547204 KDM2AQ9Y2K7 1162 aa24.08■■□□□ 1.44
ARFGAP1-220ENST00000547204 IQGAP1P46940 1657 aa24.07■■□□□ 1.44
ARFGAP1-220ENST00000547204 STAC3Q96MF2 364 aa24.07■■□□□ 1.44
ARFGAP1-220ENST00000547204 PRAG1Q86YV5 1406 aa24.06■■□□□ 1.44
ARFGAP1-220ENST00000547204 CPS1P31327 1500 aa24.05■■□□□ 1.44
ARFGAP1-220ENST00000547204 MYOM2P54296 1465 aa24.05■■□□□ 1.44
ARFGAP1-220ENST00000547204 ZNF326Q5BKZ1 582 aaKnown RBP24.05■■□□□ 1.44
ARFGAP1-220ENST00000547204 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
ARFGAP1-220ENST00000547204 PPLO60437 1756 aa24.04■■□□□ 1.44
ARFGAP1-220ENST00000547204 SLIT1O75093 1534 aa24.04■■□□□ 1.44
ARFGAP1-220ENST00000547204 MYO5BQ9ULV0 1848 aa24.03■■□□□ 1.44
ARFGAP1-220ENST00000547204 ARHGAP23Q9P227 1491 aa24.03■■□□□ 1.44
ARFGAP1-220ENST00000547204 RPGRIP1LQ68CZ1 1315 aa24.03■■□□□ 1.44
ARFGAP1-220ENST00000547204 RALGAPBQ86X10 1494 aa24.02■■□□□ 1.44
ARFGAP1-220ENST00000547204 UBAP1LF5GYI3 381 aa24.01■■□□□ 1.43
ARFGAP1-220ENST00000547204 STAG3Q9UJ98 1225 aa24.01■■□□□ 1.43
ARFGAP1-220ENST00000547204 KDM5AP29375 1690 aaKnown RBP24■■□□□ 1.43
ARFGAP1-220ENST00000547204 NEXMIFQ5QGS0 1516 aa24■■□□□ 1.43
ARFGAP1-220ENST00000547204 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
ARFGAP1-220ENST00000547204 LTKP29376 864 aa23.99■■□□□ 1.43
ARFGAP1-220ENST00000547204 TXNDC2Q86VQ3 553 aa23.99■■□□□ 1.43
ARFGAP1-220ENST00000547204 TMEM2Q9UHN6 1383 aa23.98■■□□□ 1.43
ARFGAP1-220ENST00000547204 EID1Q9Y6B2 187 aa23.97■■□□□ 1.43
ARFGAP1-220ENST00000547204 NRXN1Q9ULB1 1477 aa23.96■■□□□ 1.43
ARFGAP1-220ENST00000547204 KIAA1210Q9ULL0 1709 aa23.93■■□□□ 1.42
ARFGAP1-220ENST00000547204 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
ARFGAP1-220ENST00000547204 ZFYVE9O95405 1425 aa23.92■■□□□ 1.42
ARFGAP1-220ENST00000547204 ADGRF5Q8IZF2 1346 aa23.92■■□□□ 1.42
ARFGAP1-220ENST00000547204 ROCK2O75116 1388 aaKnown RBP23.9■■□□□ 1.42
ARFGAP1-220ENST00000547204 LAMC1P11047 1609 aa23.9■■□□□ 1.42
ARFGAP1-220ENST00000547204 VGFO15240 615 aaPredicted RBP23.89■■□□□ 1.42
ARFGAP1-220ENST00000547204 PIK3C2GO75747 1445 aa23.89■■□□□ 1.42
ARFGAP1-220ENST00000547204 STRCP1A6NGW2 1772 aa23.89■■□□□ 1.41
ARFGAP1-220ENST00000547204 GPRASP1Q5JY77 1395 aa23.89■■□□□ 1.41
ARFGAP1-220ENST00000547204 RIMS2Q9UQ26 1411 aa23.88■■□□□ 1.41
ARFGAP1-220ENST00000547204 TOM1O60784 492 aa23.86■■□□□ 1.41
ARFGAP1-220ENST00000547204 LRRC7Q96NW7 1537 aa23.86■■□□□ 1.41
ARFGAP1-220ENST00000547204 EIF4G2P78344 907 aaKnown RBP eCLIP23.85■■□□□ 1.41
ARFGAP1-220ENST00000547204 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
ARFGAP1-220ENST00000547204 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
ARFGAP1-220ENST00000547204 PIP4K2BP78356 416 aa23.84■■□□□ 1.41
ARFGAP1-220ENST00000547204 NBPF1Q3BBV0 1214 aa23.84■■□□□ 1.41
ARFGAP1-220ENST00000547204 NUTM2DQ5VT03 806 aaPredicted RBP23.84■■□□□ 1.41
ARFGAP1-220ENST00000547204 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.83■■□□□ 1.4
ARFGAP1-220ENST00000547204 USP47Q96K76 1375 aa23.82■■□□□ 1.4
ARFGAP1-220ENST00000547204 HSPA5P11021 654 aaKnown RBP23.82■■□□□ 1.4
ARFGAP1-220ENST00000547204 HDGFP51858 240 aaKnown RBP23.81■■□□□ 1.4
ARFGAP1-220ENST00000547204 SETBP1Q9Y6X0 1596 aa23.81■■□□□ 1.4
ARFGAP1-220ENST00000547204 CFAP70Q5T0N1 1121 aa23.8■■□□□ 1.4
ARFGAP1-220ENST00000547204 C14orf93Q9H972 538 aaKnown RBP23.79■■□□□ 1.4
ARFGAP1-220ENST00000547204 ALKQ9UM73 1620 aa23.78■■□□□ 1.4
ARFGAP1-220ENST00000547204 SLC26A8Q96RN1 970 aa23.78■■□□□ 1.4
ARFGAP1-220ENST00000547204 DISP3Q9P2K9 1392 aa23.77■■□□□ 1.4
ARFGAP1-220ENST00000547204 BCANQ96GW7 911 aa23.76■■□□□ 1.39
ARFGAP1-220ENST00000547204 HIRIP3Q9BW71 556 aaPredicted RBP23.76■■□□□ 1.39
ARFGAP1-220ENST00000547204 PLEKHG1Q9ULL1 1385 aa23.74■■□□□ 1.39
ARFGAP1-220ENST00000547204 ADGRB1O14514 1584 aa23.74■■□□□ 1.39
ARFGAP1-220ENST00000547204 HSPA1LP34931 641 aa23.74■■□□□ 1.39
ARFGAP1-220ENST00000547204 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
ARFGAP1-220ENST00000547204 KCNA6P17658 529 aa23.72■■□□□ 1.39
ARFGAP1-220ENST00000547204 NRXN3Q9Y4C0 1643 aa23.71■■□□□ 1.39
ARFGAP1-220ENST00000547204 NWD1Q149M9 1564 aa23.7■■□□□ 1.38
ARFGAP1-220ENST00000547204 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
ARFGAP1-220ENST00000547204 SETD1AO15047 1707 aaKnown RBP23.69■■□□□ 1.38
ARFGAP1-220ENST00000547204 TMEM94Q12767 1356 aa23.69■■□□□ 1.38
ARFGAP1-220ENST00000547204 EIF3AQ14152 1382 aaKnown RBP23.68■■□□□ 1.38
ARFGAP1-220ENST00000547204 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
ARFGAP1-220ENST00000547204 XIRP1Q702N8 1843 aaKnown RBP23.68■■□□□ 1.38
ARFGAP1-220ENST00000547204 ST20-MTHFSA0A0A6YYL1 179 aa23.66■■□□□ 1.38
ARFGAP1-220ENST00000547204 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
ARFGAP1-220ENST00000547204 TMEM132EQ6IEE7 984 aa23.64■■□□□ 1.38
ARFGAP1-220ENST00000547204 ADAMTS13Q76LX8 1427 aa23.63■■□□□ 1.37
ARFGAP1-220ENST00000547204 RBM33Q96EV2 1170 aaKnown RBP23.62■■□□□ 1.37
ARFGAP1-220ENST00000547204 TBX22Q9Y458 520 aa23.62■■□□□ 1.37
ARFGAP1-220ENST00000547204 DIP2AQ14689 1571 aa23.62■■□□□ 1.37
ARFGAP1-220ENST00000547204 YTHDC2Q9H6S0 1430 aaKnown RBP23.6■■□□□ 1.37
ARFGAP1-220ENST00000547204 ARHGEF28Q8N1W1 1705 aaKnown RBP23.6■■□□□ 1.37
ARFGAP1-220ENST00000547204 CHD2O14647 1828 aaKnown RBP23.58■■□□□ 1.36
ARFGAP1-220ENST00000547204 ILDR2Q71H61 639 aa23.58■■□□□ 1.36
ARFGAP1-220ENST00000547204 TRAK1Q9UPV9 953 aa23.58■■□□□ 1.36
ARFGAP1-220ENST00000547204 TESK2Q96S53 571 aa23.57■■□□□ 1.36
ARFGAP1-220ENST00000547204 WASHC2AQ641Q2 1341 aa23.57■■□□□ 1.36
ARFGAP1-220ENST00000547204 LRPPRCP42704 1394 aaKnown RBP23.57■■□□□ 1.36
ARFGAP1-220ENST00000547204 CCDC7Q96M83 1385 aa23.57■■□□□ 1.36
ARFGAP1-220ENST00000547204 C11orf95C9JLR9 678 aaPredicted RBP23.56■■□□□ 1.36
ARFGAP1-220ENST00000547204 METP08581 1390 aa23.56■■□□□ 1.36
ARFGAP1-220ENST00000547204 MSH6P52701 1360 aa23.56■■□□□ 1.36
ARFGAP1-220ENST00000547204 PIK3R4Q99570 1358 aa23.56■■□□□ 1.36
ARFGAP1-220ENST00000547204 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms