RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 CERKQ8TCT0 537 aa9.66□□□□□ -0.86
USP25-209ENST00000547201 LRCH3Q96II8 777 aa9.66□□□□□ -0.86
USP25-209ENST00000547201 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
USP25-209ENST00000547201 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.66□□□□□ -0.86
USP25-209ENST00000547201 PBRM1Q86U86 1689 aa9.66□□□□□ -0.86
USP25-209ENST00000547201 ITGBL1O95965 494 aaPredicted RBP9.65□□□□□ -0.86
USP25-209ENST00000547201 TDRD9Q8NDG6 1382 aaKnown RBP9.64□□□□□ -0.87
USP25-209ENST00000547201 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
USP25-209ENST00000547201 PRSS12P56730 875 aa9.64□□□□□ -0.87
USP25-209ENST00000547201 CDCA7LQ96GN5 454 aa9.64□□□□□ -0.87
USP25-209ENST00000547201 RUSC2Q8N2Y8 1516 aa9.64□□□□□ -0.87
USP25-209ENST00000547201 SOGA1O94964 1423 aa9.64□□□□□ -0.87
USP25-209ENST00000547201 ABCA10Q8WWZ4 1543 aa9.63□□□□□ -0.87
USP25-209ENST00000547201 TSR3Q9UJK0 312 aaKnown RBP9.63□□□□□ -0.87
USP25-209ENST00000547201 HPS5Q9UPZ3 1129 aa9.63□□□□□ -0.87
USP25-209ENST00000547201 CHD1O14646 1710 aa9.62□□□□□ -0.87
USP25-209ENST00000547201 OSBPP22059 807 aa9.61□□□□□ -0.87
USP25-209ENST00000547201 SNAPC4Q5SXM2 1469 aa9.6□□□□□ -0.87
USP25-209ENST00000547201 NBPF26B4DH59 902 aa9.6□□□□□ -0.87
USP25-209ENST00000547201 CDHR5Q9HBB8 845 aa9.6□□□□□ -0.87
USP25-209ENST00000547201 FAM198AQ9UFP1 575 aa9.6□□□□□ -0.87
USP25-209ENST00000547201 SMAPO00193 183 aa9.59□□□□□ -0.87
USP25-209ENST00000547201 KCNC4Q03721 635 aa9.58□□□□□ -0.88
USP25-209ENST00000547201 TATDN2Q93075 761 aa9.58□□□□□ -0.88
USP25-209ENST00000547201 RBM27Q9P2N5 1060 aaKnown RBP9.58□□□□□ -0.88
USP25-209ENST00000547201 ADAMTS12P58397 1594 aa9.58□□□□□ -0.88
USP25-209ENST00000547201 SAMD7Q7Z3H4 446 aa9.57□□□□□ -0.88
USP25-209ENST00000547201 PNMA3Q9UL41 463 aa9.57□□□□□ -0.88
USP25-209ENST00000547201 PPP4CP60510 307 aa9.56□□□□□ -0.88
USP25-209ENST00000547201 GAPVD1Q14C86 1478 aa9.55□□□□□ -0.88
USP25-209ENST00000547201 C3orf80F5H4A9 247 aa9.55□□□□□ -0.88
USP25-209ENST00000547201 IRX2Q9BZI1 471 aaPredicted RBP9.54□□□□□ -0.88
USP25-209ENST00000547201 TSHZ2Q9NRE2 1034 aa9.54□□□□□ -0.88
USP25-209ENST00000547201 NUDT18Q6ZVK8 323 aa9.53□□□□□ -0.88
USP25-209ENST00000547201 ARHGEF1Q92888 912 aaKnown RBP9.53□□□□□ -0.88
USP25-209ENST00000547201 GRIN2BQ13224 1484 aa9.52□□□□□ -0.89
USP25-209ENST00000547201 CEP170Q5SW79 1584 aa9.51□□□□□ -0.89
USP25-209ENST00000547201 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
USP25-209ENST00000547201 PADI6Q6TGC4 694 aa9.51□□□□□ -0.89
USP25-209ENST00000547201 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
USP25-209ENST00000547201 TTC13Q8NBP0 860 aa9.5□□□□□ -0.89
USP25-209ENST00000547201 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
USP25-209ENST00000547201 RNF40O75150 1001 aa9.49□□□□□ -0.89
USP25-209ENST00000547201 MAGI1Q96QZ7 1491 aaPredicted RBP9.48□□□□□ -0.89
USP25-209ENST00000547201 ERICH3Q5RHP9 1530 aa9.48□□□□□ -0.89
USP25-209ENST00000547201 CLASP1Q7Z460 1538 aa9.47□□□□□ -0.89
USP25-209ENST00000547201 ERCC6L2Q5T890 1561 aa9.47□□□□□ -0.89
USP25-209ENST00000547201 MLLT3P42568 568 aaPredicted RBP9.47□□□□□ -0.89
USP25-209ENST00000547201 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
USP25-209ENST00000547201 SYNJ2O15056 1496 aa9.47□□□□□ -0.89
USP25-209ENST00000547201 NECTIN2Q92692 538 aa9.46□□□□□ -0.9
USP25-209ENST00000547201 IGF1RP08069 1367 aa9.46□□□□□ -0.9
USP25-209ENST00000547201 GRIN2AQ12879 1464 aa9.46□□□□□ -0.9
USP25-209ENST00000547201 MTRQ99707 1265 aa9.45□□□□□ -0.9
USP25-209ENST00000547201 CUL7Q14999 1698 aa9.45□□□□□ -0.9
USP25-209ENST00000547201 SWT1Q5T5J6 900 aaKnown RBP9.44□□□□□ -0.9
USP25-209ENST00000547201 IL21Q9HBE4 155 aa9.44□□□□□ -0.9
USP25-209ENST00000547201 KIF27Q86VH2 1401 aa9.44□□□□□ -0.9
USP25-209ENST00000547201 P3H3Q8IVL6 736 aa9.43□□□□□ -0.9
USP25-209ENST00000547201 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
USP25-209ENST00000547201 SLC4A3P48751 1232 aa9.42□□□□□ -0.9
USP25-209ENST00000547201 APLP1P51693 650 aa9.42□□□□□ -0.9
USP25-209ENST00000547201 FAM9AQ8IZU1 332 aaPredicted RBP9.42□□□□□ -0.9
USP25-209ENST00000547201 FHAD1B1AJZ9 1412 aa9.41□□□□□ -0.9
USP25-209ENST00000547201 EYA1Q99502 592 aa9.41□□□□□ -0.9
USP25-209ENST00000547201 RAPGEF2Q9Y4G8 1499 aa9.4□□□□□ -0.9
USP25-209ENST00000547201 NUP160Q12769 1436 aa9.4□□□□□ -0.9
USP25-209ENST00000547201 PTGDRQ13258 359 aa9.4□□□□□ -0.9
USP25-209ENST00000547201 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
USP25-209ENST00000547201 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
USP25-209ENST00000547201 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
USP25-209ENST00000547201 PRXQ9BXM0 1461 aa9.39□□□□□ -0.91
USP25-209ENST00000547201 SHROOM2Q13796 1616 aa9.38□□□□□ -0.91
USP25-209ENST00000547201 ZNF516Q92618 1163 aa9.38□□□□□ -0.91
USP25-209ENST00000547201 NUTM2FA1L443 756 aa9.37□□□□□ -0.91
USP25-209ENST00000547201 CARMIL1Q5VZK9 1371 aa9.37□□□□□ -0.91
USP25-209ENST00000547201 ARHGEF11O15085 1522 aa9.36□□□□□ -0.91
USP25-209ENST00000547201 CTTNBP2Q8WZ74 1663 aa9.36□□□□□ -0.91
USP25-209ENST00000547201 DNAJB2P25686 324 aa9.36□□□□□ -0.91
USP25-209ENST00000547201 PPP1R18Q6NYC8 613 aa9.36□□□□□ -0.91
USP25-209ENST00000547201 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
USP25-209ENST00000547201 PRR14Q9BWN1 585 aa9.36□□□□□ -0.91
USP25-209ENST00000547201 COPS2P61201 443 aa9.35□□□□□ -0.91
USP25-209ENST00000547201 KIF21BO75037 1637 aa9.34□□□□□ -0.91
USP25-209ENST00000547201 ARAP1Q96P48 1450 aa9.34□□□□□ -0.91
USP25-209ENST00000547201 SEMA3EO15041 775 aa9.34□□□□□ -0.91
USP25-209ENST00000547201 Q6ZNB5 142 aa9.34□□□□□ -0.91
USP25-209ENST00000547201 CHMP7Q8WUX9 453 aaPredicted RBP9.34□□□□□ -0.91
USP25-209ENST00000547201 PRKD2Q9BZL6 878 aa9.34□□□□□ -0.91
USP25-209ENST00000547201 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
USP25-209ENST00000547201 ADGRG1Q9Y653 693 aa9.34□□□□□ -0.91
USP25-209ENST00000547201 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
USP25-209ENST00000547201 FCHSD2O94868 740 aa9.33□□□□□ -0.92
USP25-209ENST00000547201 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
USP25-209ENST00000547201 TMEM134Q9H6X4 195 aa9.33□□□□□ -0.92
USP25-209ENST00000547201 NKX2-3Q8TAU0 364 aa9.32□□□□□ -0.92
USP25-209ENST00000547201 PCDHB3Q9Y5E6 796 aa9.31□□□□□ -0.92
USP25-209ENST00000547201 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
USP25-209ENST00000547201 IQGAP2Q13576 1575 aa9.31□□□□□ -0.92
USP25-209ENST00000547201 RCCD1A6NED2 376 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms