RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 SLIT1O75093 1534 aa16.2■□□□□ 0.18
TROAP-204ENST00000546776 CHGAP10645 457 aaKnown RBP16.2■□□□□ 0.18
TROAP-204ENST00000546776 MED14O60244 1454 aa16.2■□□□□ 0.18
TROAP-204ENST00000546776 SCAF11Q99590 1463 aaKnown RBP16.2■□□□□ 0.18
TROAP-204ENST00000546776 ADGRB3O60242 1522 aa16.19■□□□□ 0.18
TROAP-204ENST00000546776 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
TROAP-204ENST00000546776 NEURL4Q96JN8 1562 aa16.18■□□□□ 0.18
TROAP-204ENST00000546776 FBXO41Q8TF61 875 aa16.18■□□□□ 0.18
TROAP-204ENST00000546776 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
TROAP-204ENST00000546776 LTKP29376 864 aa16.16■□□□□ 0.18
TROAP-204ENST00000546776 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.16■□□□□ 0.18
TROAP-204ENST00000546776 ZNF335Q9H4Z2 1342 aaPredicted RBP16.16■□□□□ 0.18
TROAP-204ENST00000546776 IQGAP1P46940 1657 aa16.15■□□□□ 0.18
TROAP-204ENST00000546776 BCANQ96GW7 911 aa16.15■□□□□ 0.18
TROAP-204ENST00000546776 ILDR1Q86SU0 546 aaPredicted RBP16.14■□□□□ 0.17
TROAP-204ENST00000546776 LTBP4Q8N2S1 1624 aa16.12■□□□□ 0.17
TROAP-204ENST00000546776 TMEM131LA2VDJ0 1609 aa16.12■□□□□ 0.17
TROAP-204ENST00000546776 SPATA31E1Q6ZUB1 1445 aa16.11■□□□□ 0.17
TROAP-204ENST00000546776 RIMS2Q9UQ26 1411 aa16.11■□□□□ 0.17
TROAP-204ENST00000546776 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
TROAP-204ENST00000546776 ZNF326Q5BKZ1 582 aaKnown RBP16.11■□□□□ 0.17
TROAP-204ENST00000546776 CPS1P31327 1500 aa16.1■□□□□ 0.17
TROAP-204ENST00000546776 RGL3Q3MIN7 710 aa16.1■□□□□ 0.17
TROAP-204ENST00000546776 STAC3Q96MF2 364 aa16.1■□□□□ 0.17
TROAP-204ENST00000546776 MYO5BQ9ULV0 1848 aa16.09■□□□□ 0.17
TROAP-204ENST00000546776 L3MBTL2Q969R5 705 aa16.08■□□□□ 0.16
TROAP-204ENST00000546776 RPGRIP1LQ68CZ1 1315 aa16.08■□□□□ 0.16
TROAP-204ENST00000546776 ZFYVE9O95405 1425 aa16.08■□□□□ 0.16
TROAP-204ENST00000546776 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
TROAP-204ENST00000546776 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
TROAP-204ENST00000546776 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
TROAP-204ENST00000546776 SLC26A8Q96RN1 970 aa16.06■□□□□ 0.16
TROAP-204ENST00000546776 PPLO60437 1756 aa16.05■□□□□ 0.16
TROAP-204ENST00000546776 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
TROAP-204ENST00000546776 MYOM2P54296 1465 aa16.03■□□□□ 0.16
TROAP-204ENST00000546776 KCNA6P17658 529 aa16.02■□□□□ 0.16
TROAP-204ENST00000546776 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.16
TROAP-204ENST00000546776 TBX22Q9Y458 520 aa16.02■□□□□ 0.16
TROAP-204ENST00000546776 NEXMIFQ5QGS0 1516 aa16.01■□□□□ 0.15
TROAP-204ENST00000546776 UBAP1LF5GYI3 381 aa16.01■□□□□ 0.15
TROAP-204ENST00000546776 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
TROAP-204ENST00000546776 TOM1O60784 492 aa16.01■□□□□ 0.15
TROAP-204ENST00000546776 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
TROAP-204ENST00000546776 DIP2AQ14689 1571 aa15.97■□□□□ 0.15
TROAP-204ENST00000546776 PRAG1Q86YV5 1406 aa15.97■□□□□ 0.15
TROAP-204ENST00000546776 PROSER2Q86WR7 435 aaPredicted RBP15.97■□□□□ 0.15
TROAP-204ENST00000546776 LRRC7Q96NW7 1537 aa15.97■□□□□ 0.15
TROAP-204ENST00000546776 PIK3R4Q99570 1358 aa15.97■□□□□ 0.15
TROAP-204ENST00000546776 KIAA1210Q9ULL0 1709 aa15.96■□□□□ 0.15
TROAP-204ENST00000546776 NKTRP30414 1462 aaKnown RBP15.95■□□□□ 0.14
TROAP-204ENST00000546776 NRXN1Q9ULB1 1477 aa15.95■□□□□ 0.14
TROAP-204ENST00000546776 LAMC1P11047 1609 aa15.94■□□□□ 0.14
TROAP-204ENST00000546776 TRPM1Q7Z4N2 1603 aa15.94■□□□□ 0.14
TROAP-204ENST00000546776 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
TROAP-204ENST00000546776 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
TROAP-204ENST00000546776 ADGRF5Q8IZF2 1346 aa15.93■□□□□ 0.14
TROAP-204ENST00000546776 STRCP1A6NGW2 1772 aa15.92■□□□□ 0.14
TROAP-204ENST00000546776 SETBP1Q9Y6X0 1596 aa15.92■□□□□ 0.14
TROAP-204ENST00000546776 RALGAPBQ86X10 1494 aa15.92■□□□□ 0.14
TROAP-204ENST00000546776 NBPF8Q3BBV2 869 aa15.92■□□□□ 0.14
TROAP-204ENST00000546776 PIK3C2GO75747 1445 aa15.92■□□□□ 0.14
TROAP-204ENST00000546776 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
TROAP-204ENST00000546776 TMEM94Q12767 1356 aa15.91■□□□□ 0.14
TROAP-204ENST00000546776 PIP4K2BP78356 416 aa15.91■□□□□ 0.14
TROAP-204ENST00000546776 C14orf37Q86TY3 774 aa15.9■□□□□ 0.14
TROAP-204ENST00000546776 AMOTL2Q9Y2J4 779 aa15.9■□□□□ 0.14
TROAP-204ENST00000546776 ROCK2O75116 1388 aaKnown RBP15.89■□□□□ 0.13
TROAP-204ENST00000546776 MSH6P52701 1360 aa15.88■□□□□ 0.13
TROAP-204ENST00000546776 NCOA3Q9Y6Q9 1424 aa15.88■□□□□ 0.13
TROAP-204ENST00000546776 CHD2O14647 1828 aaKnown RBP15.88■□□□□ 0.13
TROAP-204ENST00000546776 C14orf93Q9H972 538 aaKnown RBP15.86■□□□□ 0.13
TROAP-204ENST00000546776 NRXN3Q9Y4C0 1643 aa15.86■□□□□ 0.13
TROAP-204ENST00000546776 CFAP70Q5T0N1 1121 aa15.85■□□□□ 0.13
TROAP-204ENST00000546776 RBM33Q96EV2 1170 aaKnown RBP15.85■□□□□ 0.13
TROAP-204ENST00000546776 CARD11Q9BXL7 1154 aa15.85■□□□□ 0.13
TROAP-204ENST00000546776 ALKQ9UM73 1620 aa15.85■□□□□ 0.13
TROAP-204ENST00000546776 METP08581 1390 aa15.85■□□□□ 0.13
TROAP-204ENST00000546776 GPRASP1Q5JY77 1395 aa15.85■□□□□ 0.13
TROAP-204ENST00000546776 ATF3P18847 181 aa15.83■□□□□ 0.12
TROAP-204ENST00000546776 PTPRUQ92729 1446 aa15.83■□□□□ 0.12
TROAP-204ENST00000546776 EIF4G2P78344 907 aaKnown RBP eCLIP15.82■□□□□ 0.12
TROAP-204ENST00000546776 NBPF1Q3BBV0 1214 aa15.82■□□□□ 0.12
TROAP-204ENST00000546776 CADPS2Q86UW7 1296 aa15.82■□□□□ 0.12
TROAP-204ENST00000546776 C19orf44Q9H6X5 657 aa15.82■□□□□ 0.12
TROAP-204ENST00000546776 SETD1AO15047 1707 aaKnown RBP15.82■□□□□ 0.12
TROAP-204ENST00000546776 EIF3AQ14152 1382 aaKnown RBP15.81■□□□□ 0.12
TROAP-204ENST00000546776 XIRP1Q702N8 1843 aaKnown RBP15.8■□□□□ 0.12
TROAP-204ENST00000546776 ADGRB1O14514 1584 aa15.8■□□□□ 0.12
TROAP-204ENST00000546776 USP47Q96K76 1375 aa15.79■□□□□ 0.12
TROAP-204ENST00000546776 XRN1Q8IZH2 1706 aaKnown RBP15.79■□□□□ 0.12
TROAP-204ENST00000546776 SLAIN2Q9P270 581 aa15.78■□□□□ 0.12
TROAP-204ENST00000546776 FAM135BQ49AJ0 1406 aa15.77■□□□□ 0.12
TROAP-204ENST00000546776 HSPA1LP34931 641 aa15.77■□□□□ 0.12
TROAP-204ENST00000546776 PTCH1Q13635 1447 aa15.77■□□□□ 0.11
TROAP-204ENST00000546776 TMEM132EQ6IEE7 984 aa15.76■□□□□ 0.11
TROAP-204ENST00000546776 ASXL1Q8IXJ9 1541 aa15.76■□□□□ 0.11
TROAP-204ENST00000546776 YTHDC2Q9H6S0 1430 aaKnown RBP15.76■□□□□ 0.11
TROAP-204ENST00000546776 KNDC1Q76NI1 1749 aa15.75■□□□□ 0.11
TROAP-204ENST00000546776 STK26Q9P289 416 aa15.75■□□□□ 0.11
TROAP-204ENST00000546776 DCCP43146 1447 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms