RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 HSPA2P54652 639 aa17.09■□□□□ 0.33
SNHG1-221ENST00000544983 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
SNHG1-221ENST00000544983 SPATA31E1Q6ZUB1 1445 aa17.09■□□□□ 0.33
SNHG1-221ENST00000544983 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
SNHG1-221ENST00000544983 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
SNHG1-221ENST00000544983 ZFYVE9O95405 1425 aa17.06■□□□□ 0.32
SNHG1-221ENST00000544983 RIMS2Q9UQ26 1411 aa17.06■□□□□ 0.32
SNHG1-221ENST00000544983 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
SNHG1-221ENST00000544983 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
SNHG1-221ENST00000544983 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
SNHG1-221ENST00000544983 MYO5BQ9ULV0 1848 aa17.05■□□□□ 0.32
SNHG1-221ENST00000544983 MED14O60244 1454 aa17.05■□□□□ 0.32
SNHG1-221ENST00000544983 PPP1R15AO75807 674 aaPredicted RBP17.03■□□□□ 0.32
SNHG1-221ENST00000544983 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
SNHG1-221ENST00000544983 LTKP29376 864 aa17.02■□□□□ 0.32
SNHG1-221ENST00000544983 RGL3Q3MIN7 710 aa17.02■□□□□ 0.32
SNHG1-221ENST00000544983 POLR1AO95602 1720 aaPredicted RBP17.01■□□□□ 0.31
SNHG1-221ENST00000544983 PLEKHG1Q9ULL1 1385 aa17.01■□□□□ 0.31
SNHG1-221ENST00000544983 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
SNHG1-221ENST00000544983 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
SNHG1-221ENST00000544983 STRCQ7RTU9 1775 aa17■□□□□ 0.31
SNHG1-221ENST00000544983 NPHP4O75161 1426 aaPredicted RBP16.99■□□□□ 0.31
SNHG1-221ENST00000544983 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
SNHG1-221ENST00000544983 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
SNHG1-221ENST00000544983 TIMELESSQ9UNS1 1208 aa16.98■□□□□ 0.31
SNHG1-221ENST00000544983 PPLO60437 1756 aa16.97■□□□□ 0.31
SNHG1-221ENST00000544983 MYOM2P54296 1465 aa16.96■□□□□ 0.31
SNHG1-221ENST00000544983 IQGAP1P46940 1657 aa16.95■□□□□ 0.3
SNHG1-221ENST00000544983 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
SNHG1-221ENST00000544983 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
SNHG1-221ENST00000544983 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
SNHG1-221ENST00000544983 BCANQ96GW7 911 aa16.94■□□□□ 0.3
SNHG1-221ENST00000544983 TBX22Q9Y458 520 aa16.94■□□□□ 0.3
SNHG1-221ENST00000544983 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
SNHG1-221ENST00000544983 DIP2AQ14689 1571 aa16.93■□□□□ 0.3
SNHG1-221ENST00000544983 NRXN1Q9ULB1 1477 aa16.93■□□□□ 0.3
SNHG1-221ENST00000544983 NUTM2DQ5VT03 806 aaPredicted RBP16.92■□□□□ 0.3
SNHG1-221ENST00000544983 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
SNHG1-221ENST00000544983 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
SNHG1-221ENST00000544983 PIK3R4Q99570 1358 aa16.9■□□□□ 0.3
SNHG1-221ENST00000544983 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
SNHG1-221ENST00000544983 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
SNHG1-221ENST00000544983 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
SNHG1-221ENST00000544983 SLC26A8Q96RN1 970 aa16.87■□□□□ 0.29
SNHG1-221ENST00000544983 C14orf93Q9H972 538 aaKnown RBP16.87■□□□□ 0.29
SNHG1-221ENST00000544983 LAMC1P11047 1609 aa16.85■□□□□ 0.29
SNHG1-221ENST00000544983 ALKQ9UM73 1620 aa16.85■□□□□ 0.29
SNHG1-221ENST00000544983 NRXN3Q9Y4C0 1643 aa16.85■□□□□ 0.29
SNHG1-221ENST00000544983 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
SNHG1-221ENST00000544983 KCNA6P17658 529 aa16.83■□□□□ 0.28
SNHG1-221ENST00000544983 KIAA1210Q9ULL0 1709 aa16.81■□□□□ 0.28
SNHG1-221ENST00000544983 METP08581 1390 aa16.8■□□□□ 0.28
SNHG1-221ENST00000544983 CFAP70Q5T0N1 1121 aa16.8■□□□□ 0.28
SNHG1-221ENST00000544983 CPS1P31327 1500 aa16.8■□□□□ 0.28
SNHG1-221ENST00000544983 SETD1AO15047 1707 aaKnown RBP16.79■□□□□ 0.28
SNHG1-221ENST00000544983 CHD2O14647 1828 aaKnown RBP16.79■□□□□ 0.28
SNHG1-221ENST00000544983 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
SNHG1-221ENST00000544983 ZNF335Q9H4Z2 1342 aaPredicted RBP16.78■□□□□ 0.28
SNHG1-221ENST00000544983 NWD1Q149M9 1564 aa16.78■□□□□ 0.28
SNHG1-221ENST00000544983 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
SNHG1-221ENST00000544983 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.28
SNHG1-221ENST00000544983 LRPPRCP42704 1394 aaKnown RBP16.77■□□□□ 0.27
SNHG1-221ENST00000544983 ABCC11Q96J66 1382 aa16.77■□□□□ 0.27
SNHG1-221ENST00000544983 SIRT1Q96EB6 747 aa16.76■□□□□ 0.27
SNHG1-221ENST00000544983 TECPR2O15040 1411 aa16.75■□□□□ 0.27
SNHG1-221ENST00000544983 YTHDC2Q9H6S0 1430 aaKnown RBP16.75■□□□□ 0.27
SNHG1-221ENST00000544983 NCOA3Q9Y6Q9 1424 aa16.75■□□□□ 0.27
SNHG1-221ENST00000544983 ADGRB1O14514 1584 aa16.74■□□□□ 0.27
SNHG1-221ENST00000544983 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
SNHG1-221ENST00000544983 PTPRUQ92729 1446 aa16.74■□□□□ 0.27
SNHG1-221ENST00000544983 TMEM132EQ6IEE7 984 aa16.74■□□□□ 0.27
SNHG1-221ENST00000544983 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
SNHG1-221ENST00000544983 XRN1Q8IZH2 1706 aaKnown RBP16.73■□□□□ 0.27
SNHG1-221ENST00000544983 NBPF8Q3BBV2 869 aa16.73■□□□□ 0.27
SNHG1-221ENST00000544983 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
SNHG1-221ENST00000544983 TRPM1Q7Z4N2 1603 aa16.73■□□□□ 0.27
SNHG1-221ENST00000544983 RALGAPBQ86X10 1494 aa16.73■□□□□ 0.27
SNHG1-221ENST00000544983 ASXL1Q8IXJ9 1541 aa16.72■□□□□ 0.27
SNHG1-221ENST00000544983 PROSER2Q86WR7 435 aaPredicted RBP16.72■□□□□ 0.27
SNHG1-221ENST00000544983 GPRASP1Q5JY77 1395 aa16.72■□□□□ 0.27
SNHG1-221ENST00000544983 FAM135BQ49AJ0 1406 aa16.71■□□□□ 0.27
SNHG1-221ENST00000544983 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.27
SNHG1-221ENST00000544983 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
SNHG1-221ENST00000544983 KNDC1Q76NI1 1749 aa16.7■□□□□ 0.26
SNHG1-221ENST00000544983 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
SNHG1-221ENST00000544983 NBPF1Q3BBV0 1214 aa16.7■□□□□ 0.26
SNHG1-221ENST00000544983 STK26Q9P289 416 aa16.69■□□□□ 0.26
SNHG1-221ENST00000544983 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
SNHG1-221ENST00000544983 ZEB1P37275 1124 aaPredicted RBP16.68■□□□□ 0.26
SNHG1-221ENST00000544983 TMEM94Q12767 1356 aa16.67■□□□□ 0.26
SNHG1-221ENST00000544983 CARD11Q9BXL7 1154 aa16.67■□□□□ 0.26
SNHG1-221ENST00000544983 EIF3AQ14152 1382 aaKnown RBP16.66■□□□□ 0.26
SNHG1-221ENST00000544983 ROBO2Q9HCK4 1378 aa16.66■□□□□ 0.26
SNHG1-221ENST00000544983 TRAK1Q9UPV9 953 aa16.66■□□□□ 0.26
SNHG1-221ENST00000544983 C19orf44Q9H6X5 657 aa16.65■□□□□ 0.26
SNHG1-221ENST00000544983 POGKQ9P215 609 aa16.65■□□□□ 0.26
SNHG1-221ENST00000544983 MSH6P52701 1360 aa16.64■□□□□ 0.25
SNHG1-221ENST00000544983 SLC24A1O60721 1099 aa16.63■□□□□ 0.25
SNHG1-221ENST00000544983 C14orf37Q86TY3 774 aa16.63■□□□□ 0.25
SNHG1-221ENST00000544983 PRAM1Q96QH2 718 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms