RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
CDCA3-209ENST00000544610 LHX8Q68G74 356 aa10.13□□□□□ -0.79
CDCA3-209ENST00000544610 ABCC5O15440 1437 aa10.13□□□□□ -0.79
CDCA3-209ENST00000544610 PTPN23Q9H3S7 1636 aa10.11□□□□□ -0.79
CDCA3-209ENST00000544610 DAPK1P53355 1430 aa10.1□□□□□ -0.79
CDCA3-209ENST00000544610 FKBP8Q14318 412 aa10.1□□□□□ -0.79
CDCA3-209ENST00000544610 LMTK2Q8IWU2 1503 aa10.1□□□□□ -0.79
CDCA3-209ENST00000544610 PIK3C2BO00750 1634 aa10.1□□□□□ -0.79
CDCA3-209ENST00000544610 KDM5AP29375 1690 aaKnown RBP10.09□□□□□ -0.79
CDCA3-209ENST00000544610 LTKP29376 864 aa10.09□□□□□ -0.79
CDCA3-209ENST00000544610 FGD6Q6ZV73 1430 aa10.08□□□□□ -0.8
CDCA3-209ENST00000544610 TXNDC2Q86VQ3 553 aa10.08□□□□□ -0.8
CDCA3-209ENST00000544610 RRP7BPQ9NSQ0 103 aa10.08□□□□□ -0.8
CDCA3-209ENST00000544610 TMEM2Q9UHN6 1383 aa10.08□□□□□ -0.8
CDCA3-209ENST00000544610 KANK1Q14678 1352 aa10.07□□□□□ -0.8
CDCA3-209ENST00000544610 EFCAB6Q5THR3 1501 aa10.07□□□□□ -0.8
CDCA3-209ENST00000544610 XIRP1Q702N8 1843 aaKnown RBP10.06□□□□□ -0.8
CDCA3-209ENST00000544610 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
CDCA3-209ENST00000544610 EID1Q9Y6B2 187 aa10.06□□□□□ -0.8
CDCA3-209ENST00000544610 ANKRD30AQ9BXX3 1397 aa10.05□□□□□ -0.8
CDCA3-209ENST00000544610 ADGRB3O60242 1522 aa10.05□□□□□ -0.8
CDCA3-209ENST00000544610 NOS1P29475 1434 aa10.05□□□□□ -0.8
CDCA3-209ENST00000544610 ADGRL2O95490 1459 aa10.04□□□□□ -0.8
CDCA3-209ENST00000544610 CFAP65Q6ZU64 1925 aaKnown RBP10.04□□□□□ -0.8
CDCA3-209ENST00000544610 TET3O43151 1660 aa10.04□□□□□ -0.8
CDCA3-209ENST00000544610 IDI1Q13907 227 aa10.03□□□□□ -0.8
CDCA3-209ENST00000544610 NWD1Q149M9 1564 aa10.03□□□□□ -0.8
CDCA3-209ENST00000544610 FAM135BQ49AJ0 1406 aa10.03□□□□□ -0.8
CDCA3-209ENST00000544610 SLC4A2P04920 1241 aa10.02□□□□□ -0.81
CDCA3-209ENST00000544610 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.81
CDCA3-209ENST00000544610 STAG3Q9UJ98 1225 aa10.02□□□□□ -0.81
CDCA3-209ENST00000544610 NKTRP30414 1462 aaKnown RBP10.02□□□□□ -0.81
CDCA3-209ENST00000544610 RPRD2Q5VT52 1461 aaKnown RBP10.02□□□□□ -0.81
CDCA3-209ENST00000544610 TMEM94Q12767 1356 aa10.01□□□□□ -0.81
CDCA3-209ENST00000544610 CHIC2Q9UKJ5 165 aa10.01□□□□□ -0.81
CDCA3-209ENST00000544610 MYCNP04198 464 aaPredicted RBP10□□□□□ -0.81
CDCA3-209ENST00000544610 KCNA6P17658 529 aa10□□□□□ -0.81
CDCA3-209ENST00000544610 SLC52A1Q9NWF4 448 aa10□□□□□ -0.81
CDCA3-209ENST00000544610 ROBO1Q9Y6N7 1651 aa9.99□□□□□ -0.81
CDCA3-209ENST00000544610 ZFYVE9O95405 1425 aa9.99□□□□□ -0.81
CDCA3-209ENST00000544610 EVX2Q03828 476 aa9.99□□□□□ -0.81
CDCA3-209ENST00000544610 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
CDCA3-209ENST00000544610 SLC26A8Q96RN1 970 aa9.99□□□□□ -0.81
CDCA3-209ENST00000544610 RGS17Q9UGC6 210 aaPredicted RBP9.99□□□□□ -0.81
CDCA3-209ENST00000544610 ANKRD50Q9ULJ7 1429 aa9.99□□□□□ -0.81
CDCA3-209ENST00000544610 UNC13BO14795 1591 aa9.97□□□□□ -0.81
CDCA3-209ENST00000544610 PLEKHG1Q9ULL1 1385 aa9.97□□□□□ -0.81
CDCA3-209ENST00000544610 RRBP1Q9P2E9 1410 aaKnown RBP9.97□□□□□ -0.81
CDCA3-209ENST00000544610 TMEM131LA2VDJ0 1609 aa9.96□□□□□ -0.81
CDCA3-209ENST00000544610 GCC2Q8IWJ2 1684 aa9.96□□□□□ -0.81
CDCA3-209ENST00000544610 PROSER2Q86WR7 435 aaPredicted RBP9.96□□□□□ -0.82
CDCA3-209ENST00000544610 MSH6P52701 1360 aa9.96□□□□□ -0.82
CDCA3-209ENST00000544610 FXR2P51116 673 aaKnown RBP eCLIP9.95□□□□□ -0.82
CDCA3-209ENST00000544610 RBM33Q96EV2 1170 aaKnown RBP9.95□□□□□ -0.82
CDCA3-209ENST00000544610 RIMS2Q9UQ26 1411 aa9.95□□□□□ -0.82
CDCA3-209ENST00000544610 FAM50AQ14320 339 aaKnown RBP9.94□□□□□ -0.82
CDCA3-209ENST00000544610 CHD2O14647 1828 aaKnown RBP9.93□□□□□ -0.82
CDCA3-209ENST00000544610 MYO5BQ9ULV0 1848 aa9.93□□□□□ -0.82
CDCA3-209ENST00000544610 NCOA3Q9Y6Q9 1424 aa9.93□□□□□ -0.82
CDCA3-209ENST00000544610 REM2Q8IYK8 340 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-209ENST00000544610 E9PCH4 1651 aa9.93□□□□□ -0.82
CDCA3-209ENST00000544610 IQGAP3Q86VI3 1631 aa9.93□□□□□ -0.82
CDCA3-209ENST00000544610 DIP2AQ14689 1571 aa9.92□□□□□ -0.82
CDCA3-209ENST00000544610 ROCK1Q13464 1354 aa9.92□□□□□ -0.82
CDCA3-209ENST00000544610 PPP1R15AO75807 674 aaPredicted RBP9.92□□□□□ -0.82
CDCA3-209ENST00000544610 HDGFP51858 240 aaKnown RBP9.92□□□□□ -0.82
CDCA3-209ENST00000544610 BCANQ96GW7 911 aa9.92□□□□□ -0.82
CDCA3-209ENST00000544610 SLAIN2Q9P270 581 aa9.92□□□□□ -0.82
CDCA3-209ENST00000544610 PHLPP1O60346 1717 aa9.92□□□□□ -0.82
CDCA3-209ENST00000544610 ADAMTS13Q76LX8 1427 aa9.91□□□□□ -0.82
CDCA3-209ENST00000544610 POTEAQ6S8J7 498 aa9.91□□□□□ -0.82
CDCA3-209ENST00000544610 TBX22Q9Y458 520 aa9.91□□□□□ -0.82
CDCA3-209ENST00000544610 COL16A1Q07092 1604 aaPredicted RBP9.91□□□□□ -0.82
CDCA3-209ENST00000544610 PIK3R4Q99570 1358 aa9.9□□□□□ -0.82
CDCA3-209ENST00000544610 JCADQ9P266 1359 aa9.9□□□□□ -0.82
CDCA3-209ENST00000544610 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.82
CDCA3-209ENST00000544610 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDCA3-209ENST00000544610 AHDC1Q5TGY3 1603 aaPredicted RBP9.89□□□□□ -0.83
CDCA3-209ENST00000544610 TRPM2O94759 1503 aa9.88□□□□□ -0.83
CDCA3-209ENST00000544610 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-209ENST00000544610 ACIN1Q9UKV3 1341 aaKnown RBP9.87□□□□□ -0.83
CDCA3-209ENST00000544610 LRP6O75581 1613 aa9.87□□□□□ -0.83
CDCA3-209ENST00000544610 CHGAP10645 457 aaKnown RBP9.87□□□□□ -0.83
CDCA3-209ENST00000544610 SPATA31A6Q5VVP1 1343 aa9.86□□□□□ -0.83
CDCA3-209ENST00000544610 CADPS2Q86UW7 1296 aa9.86□□□□□ -0.83
CDCA3-209ENST00000544610 PTPRUQ92729 1446 aa9.86□□□□□ -0.83
CDCA3-209ENST00000544610 C19orf44Q9H6X5 657 aa9.86□□□□□ -0.83
CDCA3-209ENST00000544610 SETBP1Q9Y6X0 1596 aa9.86□□□□□ -0.83
CDCA3-209ENST00000544610 SHPRHQ149N8 1683 aa9.86□□□□□ -0.83
CDCA3-209ENST00000544610 NUP155O75694 1391 aa9.86□□□□□ -0.83
CDCA3-209ENST00000544610 NRXN3Q9Y4C0 1643 aa9.85□□□□□ -0.83
CDCA3-209ENST00000544610 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
CDCA3-209ENST00000544610 XRN1Q8IZH2 1706 aaKnown RBP9.85□□□□□ -0.83
CDCA3-209ENST00000544610 DCCP43146 1447 aa9.85□□□□□ -0.83
CDCA3-209ENST00000544610 NUTM2DQ5VT03 806 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-209ENST00000544610 C14orf37Q86TY3 774 aa9.85□□□□□ -0.83
CDCA3-209ENST00000544610 ATF3P18847 181 aa9.84□□□□□ -0.83
CDCA3-209ENST00000544610 POLA2Q14181 598 aa9.84□□□□□ -0.83
CDCA3-209ENST00000544610 SPHKAPQ2M3C7 1700 aa9.84□□□□□ -0.83
CDCA3-209ENST00000544610 HRCP23327 699 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms