RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.43■■□□□ 1.82
TSFM-208ENST00000543727 CHGAP10645 457 aaKnown RBP26.4■■□□□ 1.82
TSFM-208ENST00000543727 LTBP4Q8N2S1 1624 aa26.39■■□□□ 1.82
TSFM-208ENST00000543727 PLEKHG1Q9ULL1 1385 aa26.38■■□□□ 1.81
TSFM-208ENST00000543727 NEXMIFQ5QGS0 1516 aa26.38■■□□□ 1.81
TSFM-208ENST00000543727 DIP2AQ14689 1571 aa26.37■■□□□ 1.81
TSFM-208ENST00000543727 PPLO60437 1756 aa26.36■■□□□ 1.81
TSFM-208ENST00000543727 FOXD1Q16676 465 aa26.36■■□□□ 1.81
TSFM-208ENST00000543727 CPS1P31327 1500 aa26.35■■□□□ 1.81
TSFM-208ENST00000543727 IQSEC2Q5JU85 1478 aa26.35■■□□□ 1.81
TSFM-208ENST00000543727 PPP1R15AO75807 674 aaPredicted RBP26.34■■□□□ 1.81
TSFM-208ENST00000543727 IFT172Q9UG01 1749 aa26.33■■□□□ 1.81
TSFM-208ENST00000543727 RPGRIP1LQ68CZ1 1315 aa26.32■■□□□ 1.8
TSFM-208ENST00000543727 SETBP1Q9Y6X0 1596 aa26.32■■□□□ 1.8
TSFM-208ENST00000543727 ZNF326Q5BKZ1 582 aaKnown RBP26.31■■□□□ 1.8
TSFM-208ENST00000543727 ANKRD30BQ9BXX2 1392 aa26.31■■□□□ 1.8
TSFM-208ENST00000543727 SPATA31E1Q6ZUB1 1445 aa26.31■■□□□ 1.8
TSFM-208ENST00000543727 ZNF335Q9H4Z2 1342 aaPredicted RBP26.29■■□□□ 1.8
TSFM-208ENST00000543727 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
TSFM-208ENST00000543727 CHD2O14647 1828 aaKnown RBP26.26■■□□□ 1.79
TSFM-208ENST00000543727 NRXN3Q9Y4C0 1643 aa26.26■■□□□ 1.79
TSFM-208ENST00000543727 NWD1Q149M9 1564 aa26.26■■□□□ 1.79
TSFM-208ENST00000543727 CERKQ8TCT0 537 aa26.25■■□□□ 1.79
TSFM-208ENST00000543727 PIK3R4Q99570 1358 aa26.23■■□□□ 1.79
TSFM-208ENST00000543727 VGFO15240 615 aaPredicted RBP26.23■■□□□ 1.79
TSFM-208ENST00000543727 ADAMTS13Q76LX8 1427 aa26.22■■□□□ 1.79
TSFM-208ENST00000543727 TBX22Q9Y458 520 aa26.21■■□□□ 1.79
TSFM-208ENST00000543727 NKTRP30414 1462 aaKnown RBP26.2■■□□□ 1.78
TSFM-208ENST00000543727 BCANQ96GW7 911 aa26.2■■□□□ 1.78
TSFM-208ENST00000543727 SETD1AO15047 1707 aaKnown RBP26.18■■□□□ 1.78
TSFM-208ENST00000543727 SLC26A8Q96RN1 970 aa26.17■■□□□ 1.78
TSFM-208ENST00000543727 NUTM2DQ5VT03 806 aaPredicted RBP26.16■■□□□ 1.78
TSFM-208ENST00000543727 MYOM2P54296 1465 aa26.16■■□□□ 1.78
TSFM-208ENST00000543727 KCNA6P17658 529 aa26.14■■□□□ 1.78
TSFM-208ENST00000543727 LAMC1P11047 1609 aa26.14■■□□□ 1.77
TSFM-208ENST00000543727 LRRC7Q96NW7 1537 aa26.14■■□□□ 1.77
TSFM-208ENST00000543727 XIRP1Q702N8 1843 aaKnown RBP26.13■■□□□ 1.77
TSFM-208ENST00000543727 XRN1Q8IZH2 1706 aaKnown RBP26.12■■□□□ 1.77
TSFM-208ENST00000543727 ALKQ9UM73 1620 aa26.12■■□□□ 1.77
TSFM-208ENST00000543727 RGL3Q3MIN7 710 aa26.11■■□□□ 1.77
TSFM-208ENST00000543727 STAC3Q96MF2 364 aa26.11■■□□□ 1.77
TSFM-208ENST00000543727 FBXO41Q8TF61 875 aa26.1■■□□□ 1.77
TSFM-208ENST00000543727 NRXN1Q9ULB1 1477 aa26.1■■□□□ 1.77
TSFM-208ENST00000543727 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
TSFM-208ENST00000543727 PIK3C2GO75747 1445 aa26.08■■□□□ 1.77
TSFM-208ENST00000543727 PRAG1Q86YV5 1406 aa26.05■■□□□ 1.76
TSFM-208ENST00000543727 NCOA3Q9Y6Q9 1424 aa26.05■■□□□ 1.76
TSFM-208ENST00000543727 ADGRF5Q8IZF2 1346 aa26.02■■□□□ 1.76
TSFM-208ENST00000543727 METP08581 1390 aa26.01■■□□□ 1.75
TSFM-208ENST00000543727 KNDC1Q76NI1 1749 aa26■■□□□ 1.75
TSFM-208ENST00000543727 PTPRUQ92729 1446 aa26■■□□□ 1.75
TSFM-208ENST00000543727 SENP3Q9H4L4 574 aaPredicted RBP26■■□□□ 1.75
TSFM-208ENST00000543727 TMEM94Q12767 1356 aa25.98■■□□□ 1.75
TSFM-208ENST00000543727 PROSER2Q86WR7 435 aaPredicted RBP25.98■■□□□ 1.75
TSFM-208ENST00000543727 PTCH1Q13635 1447 aa25.97■■□□□ 1.75
TSFM-208ENST00000543727 AMOTL2Q9Y2J4 779 aa25.97■■□□□ 1.75
TSFM-208ENST00000543727 KIAA1210Q9ULL0 1709 aa25.96■■□□□ 1.75
TSFM-208ENST00000543727 PCGF6Q9BYE7 350 aa25.95■■□□□ 1.74
TSFM-208ENST00000543727 TOM1O60784 492 aa25.94■■□□□ 1.74
TSFM-208ENST00000543727 DCAF11Q8TEB1 546 aa25.93■■□□□ 1.74
TSFM-208ENST00000543727 ASXL1Q8IXJ9 1541 aa25.93■■□□□ 1.74
TSFM-208ENST00000543727 TECPR2O15040 1411 aa25.92■■□□□ 1.74
TSFM-208ENST00000543727 C14orf93Q9H972 538 aaKnown RBP25.92■■□□□ 1.74
TSFM-208ENST00000543727 MSH6P52701 1360 aa25.92■■□□□ 1.74
TSFM-208ENST00000543727 UBAP1LF5GYI3 381 aa25.9■■□□□ 1.74
TSFM-208ENST00000543727 ILDR1Q86SU0 546 aaPredicted RBP25.9■■□□□ 1.74
TSFM-208ENST00000543727 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.89■■□□□ 1.74
TSFM-208ENST00000543727 DCCP43146 1447 aa25.88■■□□□ 1.73
TSFM-208ENST00000543727 LRPPRCP42704 1394 aaKnown RBP25.88■■□□□ 1.73
TSFM-208ENST00000543727 NALCNQ8IZF0 1738 aa25.87■■□□□ 1.73
TSFM-208ENST00000543727 ABCC11Q96J66 1382 aa25.86■■□□□ 1.73
TSFM-208ENST00000543727 YTHDC2Q9H6S0 1430 aaKnown RBP25.86■■□□□ 1.73
TSFM-208ENST00000543727 ADGRB1O14514 1584 aa25.86■■□□□ 1.73
TSFM-208ENST00000543727 CLSPNQ9HAW4 1339 aa25.85■■□□□ 1.73
TSFM-208ENST00000543727 KDM2AQ9Y2K7 1162 aa25.84■■□□□ 1.73
TSFM-208ENST00000543727 ADGRL3Q9HAR2 1447 aa25.83■■□□□ 1.73
TSFM-208ENST00000543727 SIN3AQ96ST3 1273 aa25.83■■□□□ 1.73
TSFM-208ENST00000543727 C19orf44Q9H6X5 657 aa25.83■■□□□ 1.73
TSFM-208ENST00000543727 DLC1Q96QB1 1528 aa25.83■■□□□ 1.72
TSFM-208ENST00000543727 CFAP70Q5T0N1 1121 aa25.82■■□□□ 1.72
TSFM-208ENST00000543727 ROBO2Q9HCK4 1378 aa25.82■■□□□ 1.72
TSFM-208ENST00000543727 FAM135BQ49AJ0 1406 aa25.81■■□□□ 1.72
TSFM-208ENST00000543727 C14orf37Q86TY3 774 aa25.8■■□□□ 1.72
TSFM-208ENST00000543727 SIRT1Q96EB6 747 aa25.8■■□□□ 1.72
TSFM-208ENST00000543727 NEUROD1Q13562 356 aa25.79■■□□□ 1.72
TSFM-208ENST00000543727 CADPS2Q86UW7 1296 aa25.79■■□□□ 1.72
TSFM-208ENST00000543727 L3MBTL2Q969R5 705 aa25.78■■□□□ 1.72
TSFM-208ENST00000543727 RBM33Q96EV2 1170 aaKnown RBP25.77■■□□□ 1.72
TSFM-208ENST00000543727 CDC42BPGQ6DT37 1551 aa25.77■■□□□ 1.72
TSFM-208ENST00000543727 TRPM1Q7Z4N2 1603 aa25.77■■□□□ 1.72
TSFM-208ENST00000543727 TMEM132EQ6IEE7 984 aa25.76■■□□□ 1.71
TSFM-208ENST00000543727 TONSLQ96HA7 1378 aa25.76■■□□□ 1.71
TSFM-208ENST00000543727 ROBO1Q9Y6N7 1651 aa25.75■■□□□ 1.71
TSFM-208ENST00000543727 ATF3P18847 181 aa25.75■■□□□ 1.71
TSFM-208ENST00000543727 ARHGEF28Q8N1W1 1705 aaKnown RBP25.74■■□□□ 1.71
TSFM-208ENST00000543727 STK26Q9P289 416 aa25.72■■□□□ 1.71
TSFM-208ENST00000543727 PIP4K2BP78356 416 aa25.71■■□□□ 1.71
TSFM-208ENST00000543727 SCAF1Q9H7N4 1312 aaKnown RBP25.7■■□□□ 1.71
TSFM-208ENST00000543727 ADGRB2O60241 1585 aa25.69■■□□□ 1.7
TSFM-208ENST00000543727 SLAIN2Q9P270 581 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms