RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PLCD4Q9BRC7 762 aa8.64□□□□□ -1.03
SRGAP1-206ENST00000543397 NLRP2Q9NX02 1062 aa8.64□□□□□ -1.03
SRGAP1-206ENST00000543397 DIAPH1O60610 1272 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-206ENST00000543397 NLRP6P59044 892 aa8.64□□□□□ -1.03
SRGAP1-206ENST00000543397 MIA2Q96PC5 1412 aa8.64□□□□□ -1.03
SRGAP1-206ENST00000543397 LAMC3Q9Y6N6 1575 aa8.64□□□□□ -1.03
SRGAP1-206ENST00000543397 ELL2O00472 640 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-206ENST00000543397 ANKLE2Q86XL3 938 aa8.64□□□□□ -1.03
SRGAP1-206ENST00000543397 GNL2Q13823 731 aaKnown RBP8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 NEXNQ0ZGT2 675 aa8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 ESCO1Q5FWF5 840 aa8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 SYNJ1O43426 1573 aa8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 TROQ12816 1431 aaPredicted RBP8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 HSCBQ8IWL3 235 aa8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 SLC52A1Q9NWF4 448 aa8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 TMCO4Q5TGY1 634 aa8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 PDE3BQ13370 1112 aa8.63□□□□□ -1.03
SRGAP1-206ENST00000543397 NUTM2GQ5VZR2 741 aa8.62□□□□□ -1.03
SRGAP1-206ENST00000543397 KIF21BO75037 1637 aa8.62□□□□□ -1.03
SRGAP1-206ENST00000543397 NGEFQ8N5V2 710 aa8.62□□□□□ -1.03
SRGAP1-206ENST00000543397 BCCIPQ9P287 314 aaKnown RBP eCLIP8.62□□□□□ -1.03
SRGAP1-206ENST00000543397 EFCAB5A4FU69 1503 aa8.62□□□□□ -1.03
SRGAP1-206ENST00000543397 KIAA0586Q9BVV6 1533 aa8.62□□□□□ -1.03
SRGAP1-206ENST00000543397 TRIM44Q96DX7 344 aaPredicted RBP8.62□□□□□ -1.03
SRGAP1-206ENST00000543397 RRBP1Q9P2E9 1410 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-206ENST00000543397 PTMAP06454 111 aaKnown RBP8.61□□□□□ -1.03
SRGAP1-206ENST00000543397 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
SRGAP1-206ENST00000543397 PMFBP1Q8TBY8 1022 aa8.61□□□□□ -1.03
SRGAP1-206ENST00000543397 FOXD4L4Q8WXT5 416 aaPredicted RBP8.61□□□□□ -1.03
SRGAP1-206ENST00000543397 RSPH6AQ9H0K4 717 aa8.61□□□□□ -1.03
SRGAP1-206ENST00000543397 TRIM6-TRIM34B2RNG4 842 aa8.61□□□□□ -1.03
SRGAP1-206ENST00000543397 EIF2S2P20042 333 aaKnown RBP8.61□□□□□ -1.03
SRGAP1-206ENST00000543397 CABP2Q9NPB3 220 aa8.61□□□□□ -1.03
SRGAP1-206ENST00000543397 ABTB2Q8N961 1025 aa8.6□□□□□ -1.03
SRGAP1-206ENST00000543397 CFAP70Q5T0N1 1121 aa8.6□□□□□ -1.03
SRGAP1-206ENST00000543397 C9orf84Q5VXU9 1444 aa8.6□□□□□ -1.03
SRGAP1-206ENST00000543397 TOP2BQ02880 1626 aa8.6□□□□□ -1.03
SRGAP1-206ENST00000543397 NPM3O75607 178 aaKnown RBP8.6□□□□□ -1.03
SRGAP1-206ENST00000543397 GGNBP2Q9H3C7 697 aa8.59□□□□□ -1.03
SRGAP1-206ENST00000543397 FOXD4L1Q9NU39 408 aa8.59□□□□□ -1.03
SRGAP1-206ENST00000543397 DDX58O95786 925 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-206ENST00000543397 SLC26A8Q96RN1 970 aa8.59□□□□□ -1.03
SRGAP1-206ENST00000543397 TOMM22Q9NS69 142 aa8.59□□□□□ -1.03
SRGAP1-206ENST00000543397 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.59□□□□□ -1.03
SRGAP1-206ENST00000543397 ARAP1Q96P48 1450 aa8.58□□□□□ -1.04
SRGAP1-206ENST00000543397 CNKSR2Q8WXI2 1034 aa8.58□□□□□ -1.04
SRGAP1-206ENST00000543397 C9orf78Q9NZ63 289 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-206ENST00000543397 CD109Q6YHK3 1445 aa8.58□□□□□ -1.04
SRGAP1-206ENST00000543397 ECM2O94769 699 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-206ENST00000543397 DEKP35659 375 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-206ENST00000543397 PPP4R3CPQ6ZMV5 832 aa8.58□□□□□ -1.04
SRGAP1-206ENST00000543397 PRAM1Q96QH2 718 aa8.58□□□□□ -1.04
SRGAP1-206ENST00000543397 PRXQ9BXM0 1461 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 BICRAQ9NZM4 1560 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 RIPK4P57078 832 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 E9PSI1 815 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 APAF1O14727 1248 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 HFM1A2PYH4 1435 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 BCL2L13Q9BXK5 485 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 EHBP1L1Q8N3D4 1523 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 ABCA10Q8WWZ4 1543 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 NUTM2BA6NNL0 878 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 NUTM2EB1AL46 878 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 NUTM2AQ8IVF1 878 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 PRKRIP1Q9H875 184 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 STRN4Q9NRL3 753 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
SRGAP1-206ENST00000543397 DCAF8L1A6NGE4 600 aa8.56□□□□□ -1.04
SRGAP1-206ENST00000543397 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
SRGAP1-206ENST00000543397 MAGI1Q96QZ7 1491 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-206ENST00000543397 GOLGA6L6A8MZA4 724 aa8.56□□□□□ -1.04
SRGAP1-206ENST00000543397 PIP4K2BP78356 416 aa8.56□□□□□ -1.04
SRGAP1-206ENST00000543397 NRDCO43847 1150 aa8.56□□□□□ -1.04
SRGAP1-206ENST00000543397 HMOX1P09601 288 aa8.56□□□□□ -1.04
SRGAP1-206ENST00000543397 NECTIN2Q92692 538 aa8.56□□□□□ -1.04
SRGAP1-206ENST00000543397 ZKSCAN2Q63HK3 967 aa8.55□□□□□ -1.04
SRGAP1-206ENST00000543397 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
SRGAP1-206ENST00000543397 TSPYL4Q9UJ04 414 aa8.55□□□□□ -1.04
SRGAP1-206ENST00000543397 SAMD1Q6SPF0 538 aaPredicted RBP8.55□□□□□ -1.04
SRGAP1-206ENST00000543397 NOL10Q9BSC4 688 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-206ENST00000543397 FKBP5Q13451 457 aaPredicted RBP8.55□□□□□ -1.04
SRGAP1-206ENST00000543397 ERICH6BQ5W0A0 696 aa8.54□□□□□ -1.04
SRGAP1-206ENST00000543397 NOL8Q76FK4 1167 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-206ENST00000543397 VPS37DQ86XT2 251 aa8.54□□□□□ -1.04
SRGAP1-206ENST00000543397 CWC22Q9HCG8 908 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-206ENST00000543397 IQGAP2Q13576 1575 aa8.54□□□□□ -1.04
SRGAP1-206ENST00000543397 LRRFIP1Q32MZ4 808 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-206ENST00000543397 GRIN2AQ12879 1464 aa8.54□□□□□ -1.04
SRGAP1-206ENST00000543397 PRDM11Q9NQV5 511 aa8.54□□□□□ -1.04
SRGAP1-206ENST00000543397 WASHC2AQ641Q2 1341 aa8.53□□□□□ -1.04
SRGAP1-206ENST00000543397 GNAI1P63096 354 aa8.53□□□□□ -1.04
SRGAP1-206ENST00000543397 HTATSF1O43719 755 aaKnown RBP8.53□□□□□ -1.04
SRGAP1-206ENST00000543397 ZNF692Q9BU19 519 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-206ENST00000543397 PRDM10Q9NQV6 1147 aa8.53□□□□□ -1.04
SRGAP1-206ENST00000543397 RUNDC1Q96C34 613 aa8.53□□□□□ -1.04
SRGAP1-206ENST00000543397 API5Q9BZZ5 524 aaKnown RBP8.53□□□□□ -1.04
SRGAP1-206ENST00000543397 TOM1L2Q6ZVM7 507 aa8.53□□□□□ -1.04
SRGAP1-206ENST00000543397 RPGRIP1LQ68CZ1 1315 aa8.52□□□□□ -1.04
SRGAP1-206ENST00000543397 AMOTL1Q8IY63 956 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms