RNA–Protein interactions for RNA: ENST00000543178.5

CELF1-221, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-221ENST00000543178 LTBP4Q8N2S1 1624 aa14.01□□□□□ -0.17
CELF1-221ENST00000543178 CCDC144AA2RUR9 1427 aa14.01□□□□□ -0.17
CELF1-221ENST00000543178 FOXD1Q16676 465 aa14.01□□□□□ -0.17
CELF1-221ENST00000543178 PLEKHG1Q9ULL1 1385 aa14□□□□□ -0.17
CELF1-221ENST00000543178 CHGAP10645 457 aaKnown RBP14□□□□□ -0.17
CELF1-221ENST00000543178 ANKRD30BQ9BXX2 1392 aa13.99□□□□□ -0.17
CELF1-221ENST00000543178 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
CELF1-221ENST00000543178 NEXMIFQ5QGS0 1516 aa13.99□□□□□ -0.17
CELF1-221ENST00000543178 SPATA31E1Q6ZUB1 1445 aa13.98□□□□□ -0.17
CELF1-221ENST00000543178 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
CELF1-221ENST00000543178 PPLO60437 1756 aa13.96□□□□□ -0.17
CELF1-221ENST00000543178 CPS1P31327 1500 aa13.96□□□□□ -0.17
CELF1-221ENST00000543178 DIP2AQ14689 1571 aa13.96□□□□□ -0.18
CELF1-221ENST00000543178 ZNF335Q9H4Z2 1342 aaPredicted RBP13.95□□□□□ -0.18
CELF1-221ENST00000543178 PPP1R15AO75807 674 aaPredicted RBP13.95□□□□□ -0.18
CELF1-221ENST00000543178 ZNF326Q5BKZ1 582 aaKnown RBP13.95□□□□□ -0.18
CELF1-221ENST00000543178 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
CELF1-221ENST00000543178 IFT172Q9UG01 1749 aa13.95□□□□□ -0.18
CELF1-221ENST00000543178 CERKQ8TCT0 537 aa13.94□□□□□ -0.18
CELF1-221ENST00000543178 TBX22Q9Y458 520 aa13.94□□□□□ -0.18
CELF1-221ENST00000543178 STRCP1A6NGW2 1772 aa13.94□□□□□ -0.18
CELF1-221ENST00000543178 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
CELF1-221ENST00000543178 CHD2O14647 1828 aaKnown RBP13.93□□□□□ -0.18
CELF1-221ENST00000543178 VGFO15240 615 aaPredicted RBP13.93□□□□□ -0.18
CELF1-221ENST00000543178 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
CELF1-221ENST00000543178 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
CELF1-221ENST00000543178 NWD1Q149M9 1564 aa13.92□□□□□ -0.18
CELF1-221ENST00000543178 KCNA6P17658 529 aa13.9□□□□□ -0.18
CELF1-221ENST00000543178 SLC26A8Q96RN1 970 aa13.9□□□□□ -0.18
CELF1-221ENST00000543178 NUTM2DQ5VT03 806 aaPredicted RBP13.89□□□□□ -0.19
CELF1-221ENST00000543178 SETD1AO15047 1707 aaKnown RBP13.88□□□□□ -0.19
CELF1-221ENST00000543178 BCANQ96GW7 911 aa13.88□□□□□ -0.19
CELF1-221ENST00000543178 STAC3Q96MF2 364 aa13.88□□□□□ -0.19
CELF1-221ENST00000543178 NKTRP30414 1462 aaKnown RBP13.87□□□□□ -0.19
CELF1-221ENST00000543178 MYOM2P54296 1465 aa13.87□□□□□ -0.19
CELF1-221ENST00000543178 DHX57Q6P158 1386 aaKnown RBP13.87□□□□□ -0.19
CELF1-221ENST00000543178 LRRC7Q96NW7 1537 aa13.87□□□□□ -0.19
CELF1-221ENST00000543178 RGL3Q3MIN7 710 aa13.87□□□□□ -0.19
CELF1-221ENST00000543178 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
CELF1-221ENST00000543178 XIRP1Q702N8 1843 aaKnown RBP13.85□□□□□ -0.19
CELF1-221ENST00000543178 FBXO41Q8TF61 875 aa13.85□□□□□ -0.19
CELF1-221ENST00000543178 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
CELF1-221ENST00000543178 PIK3C2GO75747 1445 aa13.84□□□□□ -0.19
CELF1-221ENST00000543178 XRN1Q8IZH2 1706 aaKnown RBP13.84□□□□□ -0.19
CELF1-221ENST00000543178 PRAG1Q86YV5 1406 aa13.83□□□□□ -0.2
CELF1-221ENST00000543178 NCOA3Q9Y6Q9 1424 aa13.83□□□□□ -0.2
CELF1-221ENST00000543178 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
CELF1-221ENST00000543178 PTPRUQ92729 1446 aa13.82□□□□□ -0.2
CELF1-221ENST00000543178 LAMC1P11047 1609 aa13.82□□□□□ -0.2
CELF1-221ENST00000543178 METP08581 1390 aa13.82□□□□□ -0.2
CELF1-221ENST00000543178 PCGF6Q9BYE7 350 aa13.8□□□□□ -0.2
CELF1-221ENST00000543178 C14orf93Q9H972 538 aaKnown RBP13.8□□□□□ -0.2
CELF1-221ENST00000543178 AMOTL2Q9Y2J4 779 aa13.8□□□□□ -0.2
CELF1-221ENST00000543178 PROSER2Q86WR7 435 aaPredicted RBP13.79□□□□□ -0.2
CELF1-221ENST00000543178 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
CELF1-221ENST00000543178 TMEM94Q12767 1356 aa13.79□□□□□ -0.2
CELF1-221ENST00000543178 DCAF11Q8TEB1 546 aa13.78□□□□□ -0.2
CELF1-221ENST00000543178 PTCH1Q13635 1447 aa13.77□□□□□ -0.21
CELF1-221ENST00000543178 KNDC1Q76NI1 1749 aa13.77□□□□□ -0.21
CELF1-221ENST00000543178 KIAA1210Q9ULL0 1709 aa13.76□□□□□ -0.21
CELF1-221ENST00000543178 TECPR2O15040 1411 aa13.76□□□□□ -0.21
CELF1-221ENST00000543178 TOM1O60784 492 aa13.76□□□□□ -0.21
CELF1-221ENST00000543178 ASXL1Q8IXJ9 1541 aa13.75□□□□□ -0.21
CELF1-221ENST00000543178 LRPPRCP42704 1394 aaKnown RBP13.75□□□□□ -0.21
CELF1-221ENST00000543178 ILDR1Q86SU0 546 aaPredicted RBP13.75□□□□□ -0.21
CELF1-221ENST00000543178 SIN3AQ96ST3 1273 aa13.75□□□□□ -0.21
CELF1-221ENST00000543178 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
CELF1-221ENST00000543178 CLSPNQ9HAW4 1339 aa13.74□□□□□ -0.21
CELF1-221ENST00000543178 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
CELF1-221ENST00000543178 SIRT1Q96EB6 747 aa13.74□□□□□ -0.21
CELF1-221ENST00000543178 MSH6P52701 1360 aa13.73□□□□□ -0.21
CELF1-221ENST00000543178 CFAP70Q5T0N1 1121 aa13.73□□□□□ -0.21
CELF1-221ENST00000543178 KDM2AQ9Y2K7 1162 aa13.73□□□□□ -0.21
CELF1-221ENST00000543178 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
CELF1-221ENST00000543178 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
CELF1-221ENST00000543178 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
CELF1-221ENST00000543178 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
CELF1-221ENST00000543178 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.72□□□□□ -0.21
CELF1-221ENST00000543178 DCCP43146 1447 aa13.72□□□□□ -0.21
CELF1-221ENST00000543178 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
CELF1-221ENST00000543178 DLC1Q96QB1 1528 aa13.7□□□□□ -0.22
CELF1-221ENST00000543178 NEUROD1Q13562 356 aa13.7□□□□□ -0.22
CELF1-221ENST00000543178 TMEM132EQ6IEE7 984 aa13.7□□□□□ -0.22
CELF1-221ENST00000543178 FAM135BQ49AJ0 1406 aa13.7□□□□□ -0.22
CELF1-221ENST00000543178 ADGRL3Q9HAR2 1447 aa13.7□□□□□ -0.22
CELF1-221ENST00000543178 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
CELF1-221ENST00000543178 NALCNQ8IZF0 1738 aa13.69□□□□□ -0.22
CELF1-221ENST00000543178 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
CELF1-221ENST00000543178 C14orf37Q86TY3 774 aa13.66□□□□□ -0.22
CELF1-221ENST00000543178 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
CELF1-221ENST00000543178 TRPM1Q7Z4N2 1603 aa13.65□□□□□ -0.22
CELF1-221ENST00000543178 ATF3P18847 181 aa13.65□□□□□ -0.22
CELF1-221ENST00000543178 SLAIN2Q9P270 581 aa13.65□□□□□ -0.22
CELF1-221ENST00000543178 STK26Q9P289 416 aa13.65□□□□□ -0.22
CELF1-221ENST00000543178 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
CELF1-221ENST00000543178 CDC42BPGQ6DT37 1551 aa13.64□□□□□ -0.23
CELF1-221ENST00000543178 WAPLQ7Z5K2 1190 aa13.63□□□□□ -0.23
CELF1-221ENST00000543178 ARHGEF28Q8N1W1 1705 aaKnown RBP13.63□□□□□ -0.23
CELF1-221ENST00000543178 ROBO1Q9Y6N7 1651 aa13.63□□□□□ -0.23
CELF1-221ENST00000543178 PIP4K2BP78356 416 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms