RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	PKD2	Q13563	968 aa		13.67	□□□□□ -0.22
POLE-218	ENST00000542362	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.67	□□□□□ -0.22
POLE-218	ENST00000542362	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.67	□□□□□ -0.22
POLE-218	ENST00000542362	TMEM2	Q9UHN6	1383 aa		13.67	□□□□□ -0.22
POLE-218	ENST00000542362	SETD1A	O15047	1707 aa	Known RBP	13.67	□□□□□ -0.22
POLE-218	ENST00000542362	NEXMIF	Q5QGS0	1516 aa		13.66	□□□□□ -0.22
POLE-218	ENST00000542362	CHGA	P10645	457 aa	Known RBP	13.66	□□□□□ -0.22
POLE-218	ENST00000542362	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.65	□□□□□ -0.22
POLE-218	ENST00000542362	STAG3	Q9UJ98	1225 aa		13.65	□□□□□ -0.22
POLE-218	ENST00000542362	RIMS2	Q9UQ26	1411 aa		13.64	□□□□□ -0.23
POLE-218	ENST00000542362	ANKLE2	Q86XL3	938 aa		13.64	□□□□□ -0.23
POLE-218	ENST00000542362	TXNDC2	Q86VQ3	553 aa		13.63	□□□□□ -0.23
POLE-218	ENST00000542362	MPHOSPH9	Q99550	1183 aa		13.61	□□□□□ -0.23
POLE-218	ENST00000542362	SLC52A1	Q9NWF4	448 aa		13.61	□□□□□ -0.23
POLE-218	ENST00000542362	ALK	Q9UM73	1620 aa		13.61	□□□□□ -0.23
POLE-218	ENST00000542362	NWD1	Q149M9	1564 aa		13.6	□□□□□ -0.23
POLE-218	ENST00000542362	IQSEC2	Q5JU85	1478 aa		13.6	□□□□□ -0.23
POLE-218	ENST00000542362	SLC26A8	Q96RN1	970 aa		13.58	□□□□□ -0.24
POLE-218	ENST00000542362	ADAMTS13	Q76LX8	1427 aa		13.57	□□□□□ -0.24
POLE-218	ENST00000542362	XRN1	Q8IZH2	1706 aa	Known RBP	13.56	□□□□□ -0.24
POLE-218	ENST00000542362	LRRC7	Q96NW7	1537 aa		13.56	□□□□□ -0.24
POLE-218	ENST00000542362	SETBP1	Q9Y6X0	1596 aa		13.56	□□□□□ -0.24
POLE-218	ENST00000542362	CPS1	P31327	1500 aa		13.55	□□□□□ -0.24
POLE-218	ENST00000542362	EID1	Q9Y6B2	187 aa		13.55	□□□□□ -0.24
POLE-218	ENST00000542362	PLEKHG1	Q9ULL1	1385 aa		13.55	□□□□□ -0.24
POLE-218	ENST00000542362	ZNF326	Q5BKZ1	582 aa	Known RBP	13.54	□□□□□ -0.24
POLE-218	ENST00000542362	RBM33	Q96EV2	1170 aa	Known RBP	13.54	□□□□□ -0.24
POLE-218	ENST00000542362	DIP2A	Q14689	1571 aa		13.54	□□□□□ -0.24
POLE-218	ENST00000542362	CCDC144A	A2RUR9	1427 aa		13.53	□□□□□ -0.24
POLE-218	ENST00000542362	SPATA31E1	Q6ZUB1	1445 aa		13.53	□□□□□ -0.24
POLE-218	ENST00000542362	PTPRU	Q92729	1446 aa		13.53	□□□□□ -0.24
POLE-218	ENST00000542362	NALCN	Q8IZF0	1738 aa		13.53	□□□□□ -0.24
POLE-218	ENST00000542362	PPP1R15A	O75807	674 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-218	ENST00000542362	ASXL1	Q8IXJ9	1541 aa		13.52	□□□□□ -0.25
POLE-218	ENST00000542362	BCAN	Q96GW7	911 aa		13.51	□□□□□ -0.25
POLE-218	ENST00000542362	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.5	□□□□□ -0.25
POLE-218	ENST00000542362	ANKRD30B	Q9BXX2	1392 aa		13.49	□□□□□ -0.25
POLE-218	ENST00000542362	RGL3	Q3MIN7	710 aa		13.49	□□□□□ -0.25
POLE-218	ENST00000542362	MET	P08581	1390 aa		13.47	□□□□□ -0.25
POLE-218	ENST00000542362	KNDC1	Q76NI1	1749 aa		13.47	□□□□□ -0.25
POLE-218	ENST00000542362	ADGRF5	Q8IZF2	1346 aa		13.46	□□□□□ -0.25
POLE-218	ENST00000542362	UBAP1L	F5GYI3	381 aa		13.46	□□□□□ -0.25
POLE-218	ENST00000542362	NKTR	P30414	1462 aa	Known RBP	13.46	□□□□□ -0.25
POLE-218	ENST00000542362	ROBO1	Q9Y6N7	1651 aa		13.45	□□□□□ -0.26
POLE-218	ENST00000542362	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
POLE-218	ENST00000542362	RGPD8	O14715	1765 aa	Predicted RBP	13.45	□□□□□ -0.26
POLE-218	ENST00000542362	KCNA6	P17658	529 aa		13.44	□□□□□ -0.26
POLE-218	ENST00000542362	TMEM94	Q12767	1356 aa		13.44	□□□□□ -0.26
POLE-218	ENST00000542362	LAMC1	P11047	1609 aa		13.42	□□□□□ -0.26
POLE-218	ENST00000542362	TRIM26	Q12899	539 aa	Predicted RBP	13.42	□□□□□ -0.26
POLE-218	ENST00000542362	PIK3C2G	O75747	1445 aa		13.41	□□□□□ -0.26
POLE-218	ENST00000542362	TBX22	Q9Y458	520 aa		13.41	□□□□□ -0.26
POLE-218	ENST00000542362	DHX57	Q6P158	1386 aa	Known RBP	13.41	□□□□□ -0.26
POLE-218	ENST00000542362	MYOM2	P54296	1465 aa		13.41	□□□□□ -0.26
POLE-218	ENST00000542362	HRC	P23327	699 aa		13.4	□□□□□ -0.26
POLE-218	ENST00000542362	PIP4K2B	P78356	416 aa		13.4	□□□□□ -0.26
POLE-218	ENST00000542362	PROSER2	Q86WR7	435 aa	Predicted RBP	13.4	□□□□□ -0.26
POLE-218	ENST00000542362	NRXN1	Q9ULB1	1477 aa		13.4	□□□□□ -0.26
POLE-218	ENST00000542362	SCAF1	Q9H7N4	1312 aa	Known RBP	13.39	□□□□□ -0.27
POLE-218	ENST00000542362	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.39	□□□□□ -0.27
POLE-218	ENST00000542362	HDGF	P51858	240 aa	Known RBP	13.39	□□□□□ -0.27
POLE-218	ENST00000542362	AMOTL2	Q9Y2J4	779 aa		13.39	□□□□□ -0.27
POLE-218	ENST00000542362	SIN3A	Q96ST3	1273 aa		13.38	□□□□□ -0.27
POLE-218	ENST00000542362	PHLPP1	O60346	1717 aa		13.38	□□□□□ -0.27
POLE-218	ENST00000542362	MED1	Q15648	1581 aa	Predicted RBP	13.37	□□□□□ -0.27
POLE-218	ENST00000542362	HSPA1L	P34931	641 aa		13.37	□□□□□ -0.27
POLE-218	ENST00000542362	RPGRIP1L	Q68CZ1	1315 aa		13.37	□□□□□ -0.27
POLE-218	ENST00000542362	PIK3R4	Q99570	1358 aa		13.36	□□□□□ -0.27
POLE-218	ENST00000542362	ROBO2	Q9HCK4	1378 aa		13.36	□□□□□ -0.27
POLE-218	ENST00000542362	TMEM132E	Q6IEE7	984 aa		13.36	□□□□□ -0.27
POLE-218	ENST00000542362	KDM2A	Q9Y2K7	1162 aa		13.36	□□□□□ -0.27
POLE-218	ENST00000542362	ADGRB1	O14514	1584 aa		13.36	□□□□□ -0.27
POLE-218	ENST00000542362	VGF	O15240	615 aa	Predicted RBP	13.35	□□□□□ -0.27
POLE-218	ENST00000542362	KIAA1210	Q9ULL0	1709 aa		13.35	□□□□□ -0.27
POLE-218	ENST00000542362	TRPM1	Q7Z4N2	1603 aa		13.35	□□□□□ -0.27
POLE-218	ENST00000542362	PLEKHH1	Q9ULM0	1364 aa		13.34	□□□□□ -0.27
POLE-218	ENST00000542362	FMN2	Q9NZ56	1722 aa		13.34	□□□□□ -0.27
POLE-218	ENST00000542362	NHSL1	Q5SYE7	1610 aa		13.33	□□□□□ -0.28
POLE-218	ENST00000542362	CFAP70	Q5T0N1	1121 aa		13.33	□□□□□ -0.28
POLE-218	ENST00000542362	ACIN1	Q9UKV3	1341 aa	Known RBP	13.33	□□□□□ -0.28
POLE-218	ENST00000542362	PTCH1	Q13635	1447 aa		13.32	□□□□□ -0.28
POLE-218	ENST00000542362	DCAF11	Q8TEB1	546 aa		13.32	□□□□□ -0.28
POLE-218	ENST00000542362	PCGF6	Q9BYE7	350 aa		13.32	□□□□□ -0.28
POLE-218	ENST00000542362	STK26	Q9P289	416 aa		13.32	□□□□□ -0.28
POLE-218	ENST00000542362	MSH6	P52701	1360 aa		13.32	□□□□□ -0.28
POLE-218	ENST00000542362	COL16A1	Q07092	1604 aa	Predicted RBP	13.31	□□□□□ -0.28
POLE-218	ENST00000542362	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.3	□□□□□ -0.28
POLE-218	ENST00000542362	ADGRL3	Q9HAR2	1447 aa		13.3	□□□□□ -0.28
POLE-218	ENST00000542362	TOM1	O60784	492 aa		13.3	□□□□□ -0.28
POLE-218	ENST00000542362	NEUROD1	Q13562	356 aa		13.3	□□□□□ -0.28
POLE-218	ENST00000542362	C14orf37	Q86TY3	774 aa		13.3	□□□□□ -0.28
POLE-218	ENST00000542362	USP32	Q8NFA0	1604 aa		13.3	□□□□□ -0.28
POLE-218	ENST00000542362	PRAG1	Q86YV5	1406 aa		13.3	□□□□□ -0.28
POLE-218	ENST00000542362	WAPL	Q7Z5K2	1190 aa		13.29	□□□□□ -0.28
POLE-218	ENST00000542362	MST1R	Q04912	1400 aa		13.29	□□□□□ -0.28
POLE-218	ENST00000542362	CDC42BPG	Q6DT37	1551 aa		13.28	□□□□□ -0.28
POLE-218	ENST00000542362	QRICH2	Q9H0J4	1663 aa		13.28	□□□□□ -0.28
POLE-218	ENST00000542362	LRPPRC	P42704	1394 aa	Known RBP	13.28	□□□□□ -0.28
POLE-218	ENST00000542362	TECPR2	O15040	1411 aa		13.28	□□□□□ -0.28
POLE-218	ENST00000542362	C14orf93	Q9H972	538 aa	Known RBP	13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms